Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0013_L18
         (190 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC118673-1|AAI18674.1|  933|Homo sapiens C14orf102 protein protein.    28   4.6  
BC098568-1|AAH98568.1| 1164|Homo sapiens chromosome 14 open read...    28   4.6  
AK000870-1|BAA91404.1|  614|Homo sapiens protein ( Homo sapiens ...    28   4.6  
BC127100-1|AAI27101.1|  794|Homo sapiens KIAA1683 protein protein.     27   8.1  
BC112932-1|AAI12933.1| 1367|Homo sapiens KIAA1683 protein protein.     27   8.1  
BC034327-1|AAH34327.1|  444|Homo sapiens KIAA1683 protein protein.     27   8.1  

>BC118673-1|AAI18674.1|  933|Homo sapiens C14orf102 protein protein.
          Length = 933

 Score = 28.3 bits (60), Expect = 4.6
 Identities = 12/34 (35%), Positives = 15/34 (44%)
 Frame = +1

Query: 31  FWEPSRLAASWTTLIIYSSFFILLYFNYKFLCKN 132
           FWEPS L   W  LI        L+  Y   C++
Sbjct: 163 FWEPSTLVKEWQKLIFLHPNNTALWQKYLLFCQS 196


>BC098568-1|AAH98568.1| 1164|Homo sapiens chromosome 14 open reading
           frame 102 protein.
          Length = 1164

 Score = 28.3 bits (60), Expect = 4.6
 Identities = 12/34 (35%), Positives = 15/34 (44%)
 Frame = +1

Query: 31  FWEPSRLAASWTTLIIYSSFFILLYFNYKFLCKN 132
           FWEPS L   W  LI        L+  Y   C++
Sbjct: 394 FWEPSTLVKEWQKLIFLHPNNTALWQKYLLFCQS 427


>AK000870-1|BAA91404.1|  614|Homo sapiens protein ( Homo sapiens
           cDNA FLJ10008 fis, clone HEMBA1000227. ).
          Length = 614

 Score = 28.3 bits (60), Expect = 4.6
 Identities = 12/34 (35%), Positives = 15/34 (44%)
 Frame = +1

Query: 31  FWEPSRLAASWTTLIIYSSFFILLYFNYKFLCKN 132
           FWEPS L   W  LI        L+  Y   C++
Sbjct: 394 FWEPSTLVKEWQKLIFLHPNNTALWQKYLLFCQS 427


>BC127100-1|AAI27101.1|  794|Homo sapiens KIAA1683 protein protein.
          Length = 794

 Score = 27.5 bits (58), Expect = 8.1
 Identities = 10/16 (62%), Positives = 11/16 (68%)
 Frame = +1

Query: 22  WPAFWEPSRLAASWTT 69
           W   WEP+R AASW T
Sbjct: 499 WNRAWEPARGAASWDT 514


>BC112932-1|AAI12933.1| 1367|Homo sapiens KIAA1683 protein protein.
          Length = 1367

 Score = 27.5 bits (58), Expect = 8.1
 Identities = 10/16 (62%), Positives = 11/16 (68%)
 Frame = +1

Query: 22   WPAFWEPSRLAASWTT 69
            W   WEP+R AASW T
Sbjct: 1072 WNRAWEPARGAASWDT 1087


>BC034327-1|AAH34327.1|  444|Homo sapiens KIAA1683 protein protein.
          Length = 444

 Score = 27.5 bits (58), Expect = 8.1
 Identities = 10/16 (62%), Positives = 11/16 (68%)
 Frame = +1

Query: 22  WPAFWEPSRLAASWTT 69
           W   WEP+R AASW T
Sbjct: 149 WNRAWEPARGAASWDT 164


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,395,337
Number of Sequences: 237096
Number of extensions: 218918
Number of successful extensions: 614
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 609
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 614
length of database: 76,859,062
effective HSP length: 42
effective length of database: 66,901,030
effective search space used: 1338020600
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)