Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0013_L15
(275 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC794.07 |||dihydrolipoamide S-acetyltransferase E2 |Schizosac... 81 4e-17
SPBC776.15c |||dihydrolipoamide S-succinyltransferase, e2 compon... 57 4e-10
SPAC17G8.06c |||dihydroxy-acid dehydratase|Schizosaccharomyces p... 31 0.030
SPAP8A3.13c |||Vid 24 family protein|Schizosaccharomyces pombe|c... 26 0.86
SPCC4B3.17 |cbp3||ubiquinol cytochrome-c reductase assembly prot... 25 1.5
SPBC14C8.01c |cut2|SPBC1815.02c|securin|Schizosaccharomyces pomb... 25 2.6
SPCC1827.06c |||aspartate semialdehyde dehydrogenase|Schizosacch... 25 2.6
SPAC29E6.03c |uso1|SPAC30.07c|ER to Golgi tethering factor Uso1 ... 25 2.6
SPAC959.09c |apc5|SPAP32A8.01c|anaphase-promoting complex subuni... 24 4.6
SPAC1751.01c |gti1||gluconate transporter inducer Gti1|Schizosac... 24 4.6
SPCC970.10c |brl2|rfp1|ubiquitin-protein ligase E3 Brl2|Schizosa... 24 4.6
SPAC2F7.03c |pom1||DYRK family protein kinase Pom1|Schizosacchar... 24 4.6
SPBC428.02c |eca39|SPBC582.12c|branched chain amino acid aminotr... 23 6.1
SPBC31E1.06 |bms1|SPBC800.01|GTP binding protein Bms1|Schizosacc... 23 8.0
SPAC23C11.16 |plo1||Polo kinase Plo1|Schizosaccharomyces pombe|c... 23 8.0
SPBC215.11c |||aldo/keto reductase, unknown biological role|Schi... 23 8.0
>SPCC794.07 |||dihydrolipoamide S-acetyltransferase E2
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 483
Score = 80.6 bits (190), Expect = 4e-17
Identities = 36/67 (53%), Positives = 51/67 (76%)
Frame = +2
Query: 68 QYSHVDVSVAVATPAGLIYHPILFNADSRGIIDLSTTMKELAQKAKEGKLHPQEYQGGTV 247
QY +VD+S+AVATP+GLI P++ N + G+ ++ST K+ Q+A+ KL P+EYQGGT
Sbjct: 340 QYKNVDISMAVATPSGLIT-PVIRNTHALGLAEISTLAKDYGQRARNNKLKPEEYQGGTF 398
Query: 248 TVSNLGM 268
T+SNLGM
Sbjct: 399 TISNLGM 405
Score = 27.9 bits (59), Expect = 0.28
Identities = 10/22 (45%), Positives = 15/22 (68%)
Frame = +1
Query: 1 AVTATCKRVPTINSHWMDTFIK 66
A TA ++VP +N+ WM FI+
Sbjct: 318 ATTAALRQVPEVNAAWMGDFIR 339
>SPBC776.15c |||dihydrolipoamide S-succinyltransferase, e2 component
of oxoglutarate dehydrogenase complex
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 452
Score = 57.2 bits (132), Expect = 4e-10
Identities = 26/64 (40%), Positives = 43/64 (67%)
Frame = +2
Query: 83 DVSVAVATPAGLIYHPILFNADSRGIIDLSTTMKELAQKAKEGKLHPQEYQGGTVTVSNL 262
D+S+AVATP GL+ P++ NA+S ++++ + + L KA+ GKL ++ GT T+SN
Sbjct: 316 DLSIAVATPKGLVT-PVIRNAESMSLLEIESAIATLGSKARAGKLAIEDMASGTFTISNG 374
Query: 263 GMMG 274
G+ G
Sbjct: 375 GIFG 378
>SPAC17G8.06c |||dihydroxy-acid dehydratase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 598
Score = 31.1 bits (67), Expect = 0.030
Identities = 17/58 (29%), Positives = 28/58 (48%), Gaps = 1/58 (1%)
Frame = +2
Query: 77 HVDVSVAVATPAGLIYHPILFNADS-RGIIDLSTTMKELAQKAKEGKLHPQEYQGGTV 247
HVD V P L+ + ++ + +DL KE+A++ K P +YQ GT+
Sbjct: 521 HVDPEAQVGGPIALVQDGDVIEINAVKNTLDLMVDEKEMARRRSVWKAPPLKYQQGTL 578
>SPAP8A3.13c |||Vid 24 family protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 547
Score = 26.2 bits (55), Expect = 0.86
Identities = 17/59 (28%), Positives = 31/59 (52%)
Frame = +2
Query: 50 WIHSSNQYSHVDVSVAVATPAGLIYHPILFNADSRGIIDLSTTMKELAQKAKEGKLHPQ 226
W+ S + + + V + +GL P L N R I+D+S + + ++A EG+L+ Q
Sbjct: 350 WLRSGSVFRGLQFG-GVQSISGL---PPLTNPKERWIVDVSIHVVDYKRRALEGQLNAQ 404
>SPCC4B3.17 |cbp3||ubiquinol cytochrome-c reductase assembly protein
Cbp3|Schizosaccharomyces pombe|chr 3|||Manual
Length = 283
Score = 25.4 bits (53), Expect = 1.5
Identities = 7/18 (38%), Positives = 12/18 (66%)
Frame = -3
Query: 78 WEYWFDECIHPM*INSWY 25
+E+W+ +C PM SW+
Sbjct: 123 FEFWYQKCEIPMTFQSWF 140
>SPBC14C8.01c |cut2|SPBC1815.02c|securin|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 301
Score = 24.6 bits (51), Expect = 2.6
Identities = 9/23 (39%), Positives = 15/23 (65%)
Frame = -1
Query: 101 PPLHLHQRGNIGLMNVSIQCELI 33
PP+HL ++G +V+I CE +
Sbjct: 133 PPVHLDPIQSLGFDDVAIDCETL 155
>SPCC1827.06c |||aspartate semialdehyde
dehydrogenase|Schizosaccharomyces pombe|chr 3|||Manual
Length = 357
Score = 24.6 bits (51), Expect = 2.6
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = +1
Query: 4 VTATCKRVPTINSHWMDTFIK 66
V+A C RVP I+ H M +K
Sbjct: 234 VSAQCNRVPVIDGHLMCISVK 254
>SPAC29E6.03c |uso1|SPAC30.07c|ER to Golgi tethering factor Uso1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1044
Score = 24.6 bits (51), Expect = 2.6
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = +2
Query: 134 LFNADSRGIIDLSTTMKELAQKAKE 208
L ++D+R I DL + KEL +K KE
Sbjct: 976 LKDSDNRTISDLESKNKELEKKLKE 1000
>SPAC959.09c |apc5|SPAP32A8.01c|anaphase-promoting complex subunit
Apc5 |Schizosaccharomyces pombe|chr 1|||Manual
Length = 737
Score = 23.8 bits (49), Expect = 4.6
Identities = 8/23 (34%), Positives = 13/23 (56%)
Frame = -3
Query: 264 PRFETVTVPPWYSCGCSLPSLAF 196
PR+ + WY GCS+ S+ +
Sbjct: 420 PRYMDLLQSIWYRLGCSILSMTY 442
>SPAC1751.01c |gti1||gluconate transporter inducer
Gti1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 720
Score = 23.8 bits (49), Expect = 4.6
Identities = 9/24 (37%), Positives = 17/24 (70%)
Frame = -1
Query: 131 SGGKLDRRVLPPLHLHQRGNIGLM 60
SGG+L + +PPL +RG++ ++
Sbjct: 641 SGGRLPKVPIPPLSNMRRGSVPII 664
>SPCC970.10c |brl2|rfp1|ubiquitin-protein ligase E3
Brl2|Schizosaccharomyces pombe|chr 3|||Manual
Length = 680
Score = 23.8 bits (49), Expect = 4.6
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = -3
Query: 207 SLAFCASSFMVVDKSMIPRESALNNI 130
SL S+ +DK ++ RE+ALNN+
Sbjct: 257 SLKILDSNVNEMDKLIMERENALNNV 282
>SPAC2F7.03c |pom1||DYRK family protein kinase
Pom1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1087
Score = 23.8 bits (49), Expect = 4.6
Identities = 14/46 (30%), Positives = 22/46 (47%)
Frame = +1
Query: 19 KRVPTINSHWMDTFIKPIFPR*CKCSGGNTRRSNLPPDIVQCGLTR 156
K+ PT M FI P + S GN+ ++ PP + + +TR
Sbjct: 480 KKTPTRTKSRMQQFINWFKPSKERSSNGNSDSAS-PPPVPRLSITR 524
>SPBC428.02c |eca39|SPBC582.12c|branched chain amino acid
aminotransferase Eca39|Schizosaccharomyces pombe|chr
2|||Manual
Length = 380
Score = 23.4 bits (48), Expect = 6.1
Identities = 9/14 (64%), Positives = 13/14 (92%)
Frame = +2
Query: 176 TMKELAQKAKEGKL 217
+MKE+AQ +KEG+L
Sbjct: 302 SMKEVAQASKEGRL 315
>SPBC31E1.06 |bms1|SPBC800.01|GTP binding protein
Bms1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1121
Score = 23.0 bits (47), Expect = 8.0
Identities = 8/12 (66%), Positives = 10/12 (83%)
Frame = +3
Query: 42 TLDGYIHQTNIP 77
TL GY+H TN+P
Sbjct: 273 TLYGYLHGTNLP 284
>SPAC23C11.16 |plo1||Polo kinase Plo1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 683
Score = 23.0 bits (47), Expect = 8.0
Identities = 10/22 (45%), Positives = 11/22 (50%)
Frame = +3
Query: 159 SSTCRRP*RNLHRKLKRVNYTR 224
S C P NLH K + YTR
Sbjct: 22 SRLCFTPPTNLHNNKKNIFYTR 43
>SPBC215.11c |||aldo/keto reductase, unknown biological
role|Schizosaccharomyces pombe|chr 2|||Manual
Length = 306
Score = 23.0 bits (47), Expect = 8.0
Identities = 9/19 (47%), Positives = 14/19 (73%)
Frame = +1
Query: 1 AVTATCKRVPTINSHWMDT 57
A AT KR+P +N +++DT
Sbjct: 49 ACIATLKRLPELNINFIDT 67
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,258,218
Number of Sequences: 5004
Number of extensions: 23484
Number of successful extensions: 65
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 61
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 63
length of database: 2,362,478
effective HSP length: 61
effective length of database: 2,057,234
effective search space used: 61717020
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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