Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0013_L15
(275 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_01_0037 - 369498-369568,369668-369760,369889-369991,370061-37... 69 5e-13
02_01_0041 + 279583-281622,281724-282047,282315-282443,282526-28... 66 4e-12
07_03_0044 - 12758606-12758676,12758765-12758860,12759197-127592... 66 5e-12
06_03_0163 - 17380601-17380710,17380796-17380856,17381076-173811... 63 4e-11
08_02_0759 - 20851828-20851932,20852190-20852285,20853231-208533... 61 1e-10
04_03_0767 + 19389337-19389381,19390586-19390643,19390720-193907... 57 2e-09
09_04_0081 - 14400293-14400397,14400953-14401036,14401144-144012... 53 4e-08
02_03_0404 + 18648632-18648669,18649319-18649379,18649449-186494... 47 2e-06
01_03_0030 - 11787280-11787393,11787487-11787714,11788828-117889... 47 2e-06
12_01_0526 - 4171313-4171417,4171514-4171597,4171688-4171758,417... 45 1e-05
08_02_0288 + 15352104-15352294,15352806-15352831,15352890-153530... 28 0.93
01_06_1027 + 33912773-33912816,33913245-33913401,33913492-339135... 28 0.93
02_01_0562 + 4129852-4130235,4130355-4130453,4131046-4131146,413... 27 2.1
04_04_1086 - 30725010-30725138,30725748-30725786,30725876-307259... 27 2.8
01_01_0939 - 7404209-7404490,7405057-7405368,7405470-7405609,740... 27 2.8
03_02_0777 - 11116217-11116812,11117176-11117299 26 3.7
02_01_0244 + 1603381-1603792,1604054-1604132,1604993-1605862,160... 26 3.7
09_02_0048 - 3532663-3533475,3534086-3534589,3534715-3535740,353... 25 6.5
02_05_1280 - 35434165-35434392,35434639-35434800,35435241-354353... 25 6.5
12_02_0387 + 18453328-18453456,18453699-18453836,18454085-184541... 25 8.7
11_08_0075 + 28173220-28173433,28175348-28177083 25 8.7
11_01_0647 - 5247217-5247467,5247593-5247842,5247943-5249793 25 8.7
09_02_0196 - 5678744-5679222,5679304-5679937 25 8.7
08_01_0877 - 8607790-8608083,8608174-8608356,8608495-8608665,860... 25 8.7
03_06_0484 + 34233042-34233258,34235317-34237049 25 8.7
03_02_0540 + 9340379-9340592,9341250-9342988 25 8.7
01_06_1291 + 36032088-36032299,36032737-36033314,36034494-36036229 25 8.7
01_03_0003 + 11509530-11512772 25 8.7
>06_01_0037 -
369498-369568,369668-369760,369889-369991,370061-370156,
370227-370293,370379-370446,370606-370681,370890-370975,
371065-371150,371337-371409,371490-371735,371845-371937,
372045-372119,372496-372540,372631-372708,372805-372921,
373865-373894
Length = 500
Score = 68.9 bits (161), Expect = 5e-13
Identities = 30/66 (45%), Positives = 50/66 (75%)
Frame = +2
Query: 68 QYSHVDVSVAVATPAGLIYHPILFNADSRGIIDLSTTMKELAQKAKEGKLHPQEYQGGTV 247
QY +V+++VAV T GL + P++ +AD +G+ ++ +K+LAQ+A++ L P++Y+GGT
Sbjct: 358 QYHNVNINVAVQTEDGL-FVPVIRDADKKGLATIADEVKQLAQRARDNSLKPEDYEGGTF 416
Query: 248 TVSNLG 265
TVSNLG
Sbjct: 417 TVSNLG 422
>02_01_0041 + 279583-281622,281724-282047,282315-282443,282526-282648,
282768-282923,283224-283349,283426-283560,283815-283942,
284037-284148,284233-284547,284655-284771,284871-285166,
285252-285783,287980-288082,288808-288881,288965-289062,
289340-289380,289977-290032,290170-290244,290377-290469,
290602-290850,290930-291002,291681-291766,291853-291938,
292067-292142,292280-292347,292430-292496,292570-292665,
292741-292843,293214-293309,293396-293466
Length = 2047
Score = 66.1 bits (154), Expect = 4e-12
Identities = 28/66 (42%), Positives = 50/66 (75%)
Frame = +2
Query: 68 QYSHVDVSVAVATPAGLIYHPILFNADSRGIIDLSTTMKELAQKAKEGKLHPQEYQGGTV 247
QY +V+++VAV T GL + P++ +AD +G+ ++ +K++AQ+A++ L P++Y+GGT
Sbjct: 1904 QYHNVNINVAVQTEHGL-FVPVIRDADKKGLGTIAEEVKQVAQRARDNSLKPEDYEGGTF 1962
Query: 248 TVSNLG 265
T+SNLG
Sbjct: 1963 TISNLG 1968
>07_03_0044 -
12758606-12758676,12758765-12758860,12759197-12759299,
12759379-12759474,12759537-12759603,12759682-12759749,
12759898-12759973,12760112-12760197,12760285-12760361,
12761461-12761533,12761627-12761875,12761997-12762089,
12762218-12762292,12762661-12762716,12763473-12763513,
12763907-12764001,12764085-12764158,12765052-12765145,
12765484-12765519
Length = 541
Score = 65.7 bits (153), Expect = 5e-12
Identities = 29/66 (43%), Positives = 49/66 (74%)
Frame = +2
Query: 68 QYSHVDVSVAVATPAGLIYHPILFNADSRGIIDLSTTMKELAQKAKEGKLHPQEYQGGTV 247
QY +V+++VAV T GL + P++ +AD +G+ ++ +K+LAQ+A++ L P +Y+GGT
Sbjct: 398 QYHNVNINVAVQTEHGL-FVPVIRDADKKGLGMIAEEVKQLAQRARDNSLKPDDYEGGTF 456
Query: 248 TVSNLG 265
T+SNLG
Sbjct: 457 TISNLG 462
Score = 25.0 bits (52), Expect = 8.7
Identities = 9/22 (40%), Positives = 13/22 (59%)
Frame = +1
Query: 1 AVTATCKRVPTINSHWMDTFIK 66
A ++VP NS WM+ FI+
Sbjct: 376 AAALALRKVPQCNSSWMNDFIR 397
>06_03_0163 -
17380601-17380710,17380796-17380856,17381076-17381150,
17381538-17381600,17381679-17381755,17382432-17382515,
17382610-17382654,17382729-17382789,17383658-17384053,
17384220-17384289,17387010-17387083,17387202-17387246,
17387342-17387391,17387846-17387947,17388587-17388620,
17388681-17388758,17388915-17388965,17389082-17389085,
17389182-17389256,17389530-17389624
Length = 549
Score = 62.9 bits (146), Expect = 4e-11
Identities = 32/65 (49%), Positives = 46/65 (70%)
Frame = +2
Query: 80 VDVSVAVATPAGLIYHPILFNADSRGIIDLSTTMKELAQKAKEGKLHPQEYQGGTVTVSN 259
VD+S+AVAT GL+ PI+ NAD + I +S+ +K+LA+KA+ GKL P E+QGGT S
Sbjct: 437 VDISIAVATEKGLMT-PIIRNADQKTISAISSEVKQLAEKARAGKLAPNEFQGGTFRHSG 495
Query: 260 LGMMG 274
+ +G
Sbjct: 496 ILAVG 500
>08_02_0759 -
20851828-20851932,20852190-20852285,20853231-20853314,
20853411-20853481,20853568-20853655,20853745-20853936,
20854044-20854931
Length = 507
Score = 61.3 bits (142), Expect = 1e-10
Identities = 32/67 (47%), Positives = 44/67 (65%)
Frame = +2
Query: 74 SHVDVSVAVATPAGLIYHPILFNADSRGIIDLSTTMKELAQKAKEGKLHPQEYQGGTVTV 253
++++++VAVA GLI P+L +AD I LS KEL +KA+ +L P EY GT T+
Sbjct: 336 TNINIAVAVAIDGGLIT-PVLEDADKLDIYLLSQKWKELVKKARAKQLQPNEYSSGTFTL 394
Query: 254 SNLGMMG 274
SNLGM G
Sbjct: 395 SNLGMFG 401
>04_03_0767 +
19389337-19389381,19390586-19390643,19390720-19390759,
19390859-19390926,19391007-19391081,19391161-19391216,
19391317-19391361,19391450-19391701,19391787-19391881,
19392395-19392485,19392578-19392688,19392788-19392982,
19393071-19393262
Length = 440
Score = 56.8 bits (131), Expect = 2e-09
Identities = 29/66 (43%), Positives = 41/66 (62%)
Frame = +2
Query: 77 HVDVSVAVATPAGLIYHPILFNADSRGIIDLSTTMKELAQKAKEGKLHPQEYQGGTVTVS 256
+VD+SVAV T GL+ P++ +AD+ D+ + LA+KA EG L E GGT T+S
Sbjct: 301 YVDISVAVGTSKGLVV-PVIRDADNMNFADIEKGINALAKKATEGALSIDEMAGGTFTIS 359
Query: 257 NLGMMG 274
N G+ G
Sbjct: 360 NGGVYG 365
>09_04_0081 -
14400293-14400397,14400953-14401036,14401144-14401214,
14401293-14401380,14401487-14401678,14401772-14402704
Length = 490
Score = 52.8 bits (121), Expect = 4e-08
Identities = 27/67 (40%), Positives = 41/67 (61%)
Frame = +2
Query: 74 SHVDVSVAVATPAGLIYHPILFNADSRGIIDLSTTMKELAQKAKEGKLHPQEYQGGTVTV 253
S ++++VAVA GL+ P+L + D + L+ + L +KA+ +L P EY GT T+
Sbjct: 351 SSINIAVAVAIEGGLLT-PVLEDVDKLDVYLLAQKWRGLLKKARMKQLQPDEYSSGTFTL 409
Query: 254 SNLGMMG 274
SNLGM G
Sbjct: 410 SNLGMFG 416
>02_03_0404 +
18648632-18648669,18649319-18649379,18649449-18649476,
18649787-18649861,18649929-18649984,18650085-18650129,
18650224-18650475,18650586-18650680,18651114-18651204,
18651356-18651466,18651556-18651750,18651827-18652018
Length = 412
Score = 47.2 bits (107), Expect = 2e-06
Identities = 24/66 (36%), Positives = 37/66 (56%)
Frame = +2
Query: 77 HVDVSVAVATPAGLIYHPILFNADSRGIIDLSTTMKELAQKAKEGKLHPQEYQGGTVTVS 256
++D+SVAV T GL+ ++ + D+ D+ + LA+KA EG GGT T+S
Sbjct: 273 YIDISVAVGTSKGLVVL-VIHDIDAMNFADIEKGINNLAKKATEGAQSINNMAGGTFTIS 331
Query: 257 NLGMMG 274
N G+ G
Sbjct: 332 NGGVYG 337
>01_03_0030 -
11787280-11787393,11787487-11787714,11788828-11788916,
11789516-11789763,11789858-11790146,11790295-11790454,
11791228-11791404
Length = 434
Score = 46.8 bits (106), Expect = 2e-06
Identities = 23/67 (34%), Positives = 41/67 (61%)
Frame = +2
Query: 74 SHVDVSVAVATPAGLIYHPILFNADSRGIIDLSTTMKELAQKAKEGKLHPQEYQGGTVTV 253
SH ++ VA+AT GL+ P + N S I++++ + L + A +L ++ GGT+T+
Sbjct: 293 SH-NIGVAMATEHGLVV-PNIKNVQSLSILEITKELSRLHEMASHNRLSTEDIAGGTITL 350
Query: 254 SNLGMMG 274
SN+G +G
Sbjct: 351 SNIGAIG 357
>12_01_0526 -
4171313-4171417,4171514-4171597,4171688-4171758,
4171814-4171891,4174482-4174569,4174659-4174850,
4174939-4175802
Length = 493
Score = 44.8 bits (101), Expect = 1e-05
Identities = 25/63 (39%), Positives = 36/63 (57%)
Frame = +2
Query: 74 SHVDVSVAVATPAGLIYHPILFNADSRGIIDLSTTMKELAQKAKEGKLHPQEYQGGTVTV 253
S ++++VAVA GLI P+L +AD I LS KEL KA+ +L P EY V +
Sbjct: 328 SSINIAVAVAIDGGLIT-PVLPDADKLDIYSLSRKWKELVDKARAKQLQPHEYNSVYVKI 386
Query: 254 SNL 262
++
Sbjct: 387 DSV 389
>08_02_0288 +
15352104-15352294,15352806-15352831,15352890-15353074,
15353850-15353896,15354224-15354269
Length = 164
Score = 28.3 bits (60), Expect = 0.93
Identities = 11/35 (31%), Positives = 19/35 (54%)
Frame = +2
Query: 146 DSRGIIDLSTTMKELAQKAKEGKLHPQEYQGGTVT 250
+ RGI+ + + +L+++ EG P EY G T
Sbjct: 126 NERGILRTQSVLNDLSKEVGEGVQRPDEYTGSEAT 160
>01_06_1027 +
33912773-33912816,33913245-33913401,33913492-33913589,
33913680-33913775,33914422-33914681,33914778-33915088,
33915154-33915297,33915452-33915589,33915674-33915721,
33916328-33916408,33916705-33916864,33917411-33917532
Length = 552
Score = 28.3 bits (60), Expect = 0.93
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = -3
Query: 231 YSCGCSLPSLAFCASSFMVVDKSMIPRES 145
Y CGC LPS F S ++ S++ E+
Sbjct: 14 YGCGCGLPSANFSPSKLALIRLSLMMAET 42
>02_01_0562 +
4129852-4130235,4130355-4130453,4131046-4131146,
4131229-4131300,4131712-4131802,4132005-4132085,
4132263-4132331,4132634-4132690,4132776-4132898,
4133000-4133038,4133255-4133380
Length = 413
Score = 27.1 bits (57), Expect = 2.1
Identities = 19/48 (39%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Frame = +2
Query: 122 YHPILFN-ADSRGIIDLSTTMKELAQKAKEGKLHPQEYQGGTVTVSNL 262
Y P LFN D GI + S T + + EGK HP+ Y+ VT + L
Sbjct: 312 YLPTLFNMVDPGGISNWSVTHVDWS----EGKWHPRSYRAIDVTYALL 355
>04_04_1086 -
30725010-30725138,30725748-30725786,30725876-30725998,
30726953-30727015,30727540-30727620,30727998-30728088,
30728295-30728366,30728452-30728552,30728681-30728779,
30729132-30729329,30730792-30730824,30731084-30731192,
30732088-30732149,30732388-30732468,30732549-30732704,
30732812-30732976,30733351-30733413,30733492-30733545,
30733574-30733612,30733727-30733783,30733862-30733930,
30734022-30734135,30734216-30734284,30734821-30734927,
30735207-30735363
Length = 776
Score = 26.6 bits (56), Expect = 2.8
Identities = 17/44 (38%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Frame = +2
Query: 122 YHPILFNA-DSRGIIDLSTTMKELAQKAKEGKLHPQEYQGGTVT 250
Y P LF+ D GI + S T + + EGK HP+ Y+ VT
Sbjct: 674 YLPTLFHMIDPNGIANWSVTHVDWS----EGKWHPKAYRANDVT 713
>01_01_0939 -
7404209-7404490,7405057-7405368,7405470-7405609,
7406226-7406289,7406378-7406616,7406957-7406983,
7407590-7407749
Length = 407
Score = 26.6 bits (56), Expect = 2.8
Identities = 17/56 (30%), Positives = 27/56 (48%)
Frame = +2
Query: 95 AVATPAGLIYHPILFNADSRGIIDLSTTMKELAQKAKEGKLHPQEYQGGTVTVSNL 262
A+ PAG YH LF D R + + ++ + +L+P Y+ G V +S L
Sbjct: 181 AIVGPAGTPYHDGLFFFDVRFPSEYPQSPPKVHYHSGGLRLNPNLYESGKVCLSLL 236
>03_02_0777 - 11116217-11116812,11117176-11117299
Length = 239
Score = 26.2 bits (55), Expect = 3.7
Identities = 15/51 (29%), Positives = 29/51 (56%)
Frame = +2
Query: 86 VSVAVATPAGLIYHPILFNADSRGIIDLSTTMKELAQKAKEGKLHPQEYQG 238
+ ++ ATPA L++H + + S G++ T++E ++ EG PQ +G
Sbjct: 154 LQLSAATPANLLHHRTVSSPASVGLLHCRATLEE--ERTGEG---PQAERG 199
>02_01_0244 +
1603381-1603792,1604054-1604132,1604993-1605862,
1606019-1606276,1606675-1606834
Length = 592
Score = 26.2 bits (55), Expect = 3.7
Identities = 14/41 (34%), Positives = 19/41 (46%)
Frame = +1
Query: 25 VPTINSHWMDTFIKPIFPR*CKCSGGNTRRSNLPPDIVQCG 147
V I +T + + P C C GGN+R+S P V G
Sbjct: 326 VDDIEKPTKETDLLSVDPCNCCCDGGNSRKSEDNPSNVPSG 366
>09_02_0048 - 3532663-3533475,3534086-3534589,3534715-3535740,
3536083-3536226,3536974-3537375,3537499-3537721,
3537830-3542368,3542480-3542599,3543005-3543038,
3543922-3544102,3544198-3544815,3545022-3551098,
3551139-3551304,3551508-3551614,3552056-3552178,
3553417-3553642
Length = 5100
Score = 25.4 bits (53), Expect = 6.5
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +1
Query: 85 CKCSGGNTRRSNLPPDIVQCGLTRYHRLVDDHEG 186
C+ GNT SN+P +I T +HR++ EG
Sbjct: 2248 CRIHVGNTSASNIPSEI-----TIFHRVIKLDEG 2276
>02_05_1280 -
35434165-35434392,35434639-35434800,35435241-35435372,
35436048-35436115,35436719-35437313
Length = 394
Score = 25.4 bits (53), Expect = 6.5
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = +2
Query: 41 HIGWIHSSNQYSHVDVSVAVA 103
HIG H Y HVD S VA
Sbjct: 61 HIGGSHIGQGYHHVDASAPVA 81
>12_02_0387 +
18453328-18453456,18453699-18453836,18454085-18454144,
18461532-18462591,18463022-18463521
Length = 628
Score = 25.0 bits (52), Expect = 8.7
Identities = 13/36 (36%), Positives = 17/36 (47%)
Frame = +1
Query: 91 CSGGNTRRSNLPPDIVQCGLTRYHRLVDDHEGTCTE 198
C GG RRS PP V+C + EG+ T+
Sbjct: 434 CDGG--RRSASPPQGVRCPASEQPSAASPQEGSSTD 467
>11_08_0075 + 28173220-28173433,28175348-28177083
Length = 649
Score = 25.0 bits (52), Expect = 8.7
Identities = 13/48 (27%), Positives = 23/48 (47%)
Frame = +2
Query: 62 SNQYSHVDVSVAVATPAGLIYHPILFNADSRGIIDLSTTMKELAQKAK 205
+N ++S P G+ + F+ D+ GI+++S K QK K
Sbjct: 459 NNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTTGQKNK 506
>11_01_0647 - 5247217-5247467,5247593-5247842,5247943-5249793
Length = 783
Score = 25.0 bits (52), Expect = 8.7
Identities = 13/34 (38%), Positives = 16/34 (47%)
Frame = +1
Query: 34 INSHWMDTFIKPIFPR*CKCSGGNTRRSNLPPDI 135
IN+ W D P++P K GG LP DI
Sbjct: 411 INTLWYDAAYPPLYP---KDGGGGDCEVELPQDI 441
>09_02_0196 - 5678744-5679222,5679304-5679937
Length = 370
Score = 25.0 bits (52), Expect = 8.7
Identities = 11/29 (37%), Positives = 15/29 (51%)
Frame = +3
Query: 189 LHRKLKRVNYTRKSTKEVQ*PSRTWE*WV 275
LHR ++R+ Y R V+ WE WV
Sbjct: 13 LHRLMRRLRYPRFPIYRVRQCGPVWEAWV 41
>08_01_0877 -
8607790-8608083,8608174-8608356,8608495-8608665,
8608765-8608925,8609012-8609093,8609197-8609229,
8609359-8609597,8609686-8609850,8609955-8610204,
8610314-8611414,8611841-8611960,8612626-8612691
Length = 954
Score = 25.0 bits (52), Expect = 8.7
Identities = 11/38 (28%), Positives = 20/38 (52%)
Frame = +2
Query: 125 HPILFNADSRGIIDLSTTMKELAQKAKEGKLHPQEYQG 238
H I+ RG+ L+ +E+ ++ K+G P E+ G
Sbjct: 445 HAIIDRYADRGLRSLAVARQEVPERRKDGPGGPWEFVG 482
>03_06_0484 + 34233042-34233258,34235317-34237049
Length = 649
Score = 25.0 bits (52), Expect = 8.7
Identities = 13/48 (27%), Positives = 23/48 (47%)
Frame = +2
Query: 62 SNQYSHVDVSVAVATPAGLIYHPILFNADSRGIIDLSTTMKELAQKAK 205
+N ++S P G+ + F+ D+ GI+++S K QK K
Sbjct: 460 NNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTTGQKNK 507
>03_02_0540 + 9340379-9340592,9341250-9342988
Length = 650
Score = 25.0 bits (52), Expect = 8.7
Identities = 13/48 (27%), Positives = 23/48 (47%)
Frame = +2
Query: 62 SNQYSHVDVSVAVATPAGLIYHPILFNADSRGIIDLSTTMKELAQKAK 205
+N ++S P G+ + F+ D+ GI+++S K QK K
Sbjct: 459 NNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTTGQKNK 506
>01_06_1291 + 36032088-36032299,36032737-36033314,36034494-36036229
Length = 841
Score = 25.0 bits (52), Expect = 8.7
Identities = 13/48 (27%), Positives = 23/48 (47%)
Frame = +2
Query: 62 SNQYSHVDVSVAVATPAGLIYHPILFNADSRGIIDLSTTMKELAQKAK 205
+N ++S P G+ + F+ D+ GI+++S K QK K
Sbjct: 651 NNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTTGQKNK 698
>01_03_0003 + 11509530-11512772
Length = 1080
Score = 25.0 bits (52), Expect = 8.7
Identities = 13/23 (56%), Positives = 16/23 (69%)
Frame = -1
Query: 239 LLGTLAGVVYPL*LSVQVPSWSS 171
+L TLAG + + SVQVPS SS
Sbjct: 5 ILSTLAGFLAKVYTSVQVPSCSS 27
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,827,056
Number of Sequences: 37544
Number of extensions: 175281
Number of successful extensions: 418
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 404
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 412
length of database: 14,793,348
effective HSP length: 69
effective length of database: 12,202,812
effective search space used: 268461864
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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