Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0013_L15
         (275 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z77659-4|CAB01163.1|  507|Caenorhabditis elegans Hypothetical pr...    92   6e-20
Z81044-2|CAB02813.1|  337|Caenorhabditis elegans Hypothetical pr...    80   2e-16
AF047653-6|AAC04462.2|  463|Caenorhabditis elegans Hypothetical ...    62   7e-11
AF039049-10|AAB94247.1|  548|Caenorhabditis elegans Cytochrome p...    29   0.62 
AF039049-12|AAB94245.1|  499|Caenorhabditis elegans Cytochrome p...    28   0.82 
AF039049-11|AAB94246.1|  499|Caenorhabditis elegans Cytochrome p...    28   0.82 
U88184-1|AAK31517.1|  476|Caenorhabditis elegans C-type lectin p...    27   1.9  
Z50795-6|CAD59152.2|  707|Caenorhabditis elegans Hypothetical pr...    27   2.5  
Z50795-5|CAA90665.2|  705|Caenorhabditis elegans Hypothetical pr...    27   2.5  
Z81077-3|CAB03067.1|  527|Caenorhabditis elegans Hypothetical pr...    26   3.3  
U97017-6|AAB52362.1|  374|Caenorhabditis elegans Hypothetical pr...    26   4.4  
Z68215-8|CAA92454.1|  318|Caenorhabditis elegans Hypothetical pr...    25   5.8  
AL032652-8|CAA21706.1|  277|Caenorhabditis elegans Hypothetical ...    25   5.8  
Z81573-3|CAB04624.3|  398|Caenorhabditis elegans Hypothetical pr...    25   7.7  
U00058-3|AAD31933.1|  162|Caenorhabditis elegans Ground-like (gr...    25   7.7  
AF016663-3|AAC70878.1| 1170|Caenorhabditis elegans Hypothetical ...    25   7.7  

>Z77659-4|CAB01163.1|  507|Caenorhabditis elegans Hypothetical
           protein F23B12.5 protein.
          Length = 507

 Score = 91.9 bits (218), Expect = 6e-20
 Identities = 45/76 (59%), Positives = 59/76 (77%), Gaps = 1/76 (1%)
 Frame = +2

Query: 50  WIHSS-NQYSHVDVSVAVATPAGLIYHPILFNADSRGIIDLSTTMKELAQKAKEGKLHPQ 226
           W+ S   +  HVDVSVAV+TPAGLI  PI+FNA ++G+  +++ + ELAQ+A+EGKL P 
Sbjct: 358 WMDSFIRENHHVDVSVAVSTPAGLIT-PIIFNAHAKGLATIASEIVELAQRAREGKLQPH 416

Query: 227 EYQGGTVTVSNLGMMG 274
           E+QGGT TVSNLGM G
Sbjct: 417 EFQGGTFTVSNLGMFG 432



 Score = 33.1 bits (72), Expect = 0.029
 Identities = 12/22 (54%), Positives = 16/22 (72%)
 Frame = +1

Query: 1   AVTATCKRVPTINSHWMDTFIK 66
           A    C+RVP  NS+WMD+FI+
Sbjct: 343 ASALACQRVPEANSYWMDSFIR 364


>Z81044-2|CAB02813.1|  337|Caenorhabditis elegans Hypothetical
           protein C30H6.7 protein.
          Length = 337

 Score = 80.2 bits (189), Expect = 2e-16
 Identities = 38/79 (48%), Positives = 55/79 (69%)
 Frame = +2

Query: 38  IHIGWIHSSNQYSHVDVSVAVATPAGLIYHPILFNADSRGIIDLSTTMKELAQKAKEGKL 217
           +++ W         VD+SVAVATP GLI  PI+ N+D  G++ +S+ +KEL+  A+E KL
Sbjct: 171 VNVRWTPEGIGLGSVDISVAVATPTGLIT-PIVENSDILGVLAISSKVKELSGLARESKL 229

Query: 218 HPQEYQGGTVTVSNLGMMG 274
            PQ++QGG+ T+SNLGM G
Sbjct: 230 KPQQFQGGSFTISNLGMFG 248


>AF047653-6|AAC04462.2|  463|Caenorhabditis elegans Hypothetical
           protein W02F12.5 protein.
          Length = 463

 Score = 61.7 bits (143), Expect = 7e-11
 Identities = 31/69 (44%), Positives = 44/69 (63%), Gaps = 1/69 (1%)
 Frame = +2

Query: 71  YSH-VDVSVAVATPAGLIYHPILFNADSRGIIDLSTTMKELAQKAKEGKLHPQEYQGGTV 247
           Y H VD+SVAVATP GL+  P+L N +S     +   +  L  KA++GKL  ++ +GGT 
Sbjct: 321 YRHFVDISVAVATPKGLVV-PVLRNVESMNYAQIELELANLGVKARDGKLAVEDMEGGTF 379

Query: 248 TVSNLGMMG 274
           T+SN G+ G
Sbjct: 380 TISNGGVFG 388


>AF039049-10|AAB94247.1|  548|Caenorhabditis elegans Cytochrome p450
           family protein 35B1 protein.
          Length = 548

 Score = 28.7 bits (61), Expect = 0.62
 Identities = 11/27 (40%), Positives = 16/27 (59%)
 Frame = -1

Query: 131 SGGKLDRRVLPPLHLHQRGNIGLMNVS 51
           +G K   R LPP++LH   N+GL   +
Sbjct: 91  NGNKYKDRFLPPVYLHVSNNLGLFTAN 117


>AF039049-12|AAB94245.1|  499|Caenorhabditis elegans Cytochrome p450
           family protein 35B3 protein.
          Length = 499

 Score = 28.3 bits (60), Expect = 0.82
 Identities = 10/27 (37%), Positives = 17/27 (62%)
 Frame = -1

Query: 131 SGGKLDRRVLPPLHLHQRGNIGLMNVS 51
           +G K   R+LPP+ +H   N+GL+  +
Sbjct: 91  NGNKFKDRLLPPIFIHVSENLGLLTAN 117


>AF039049-11|AAB94246.1|  499|Caenorhabditis elegans Cytochrome p450
           family protein 35B2 protein.
          Length = 499

 Score = 28.3 bits (60), Expect = 0.82
 Identities = 11/27 (40%), Positives = 18/27 (66%)
 Frame = -1

Query: 131 SGGKLDRRVLPPLHLHQRGNIGLMNVS 51
           +G +L  R LPP+ LH   N+GL++ +
Sbjct: 91  NGSRLIDRFLPPVFLHLSNNLGLVSAN 117


>U88184-1|AAK31517.1|  476|Caenorhabditis elegans C-type lectin
           protein 19 protein.
          Length = 476

 Score = 27.1 bits (57), Expect = 1.9
 Identities = 12/18 (66%), Positives = 13/18 (72%), Gaps = 2/18 (11%)
 Frame = -3

Query: 258 FETVTVPPW--YSCGCSL 211
           FETVTV PW  Y+C  SL
Sbjct: 373 FETVTVAPWISYTCNSSL 390


>Z50795-6|CAD59152.2|  707|Caenorhabditis elegans Hypothetical
           protein R166.5b protein.
          Length = 707

 Score = 26.6 bits (56), Expect = 2.5
 Identities = 13/34 (38%), Positives = 19/34 (55%), Gaps = 3/34 (8%)
 Frame = +1

Query: 97  GGNTRRSNLPP---DIVQCGLTRYHRLVDDHEGT 189
           GG TRR    P   +  +CG   Y++L D+H G+
Sbjct: 178 GGGTRRVPRTPGRKNSSKCGFFDYYKLTDEHLGS 211


>Z50795-5|CAA90665.2|  705|Caenorhabditis elegans Hypothetical
           protein R166.5a protein.
          Length = 705

 Score = 26.6 bits (56), Expect = 2.5
 Identities = 13/34 (38%), Positives = 19/34 (55%), Gaps = 3/34 (8%)
 Frame = +1

Query: 97  GGNTRRSNLPP---DIVQCGLTRYHRLVDDHEGT 189
           GG TRR    P   +  +CG   Y++L D+H G+
Sbjct: 176 GGGTRRVPRTPGRKNSSKCGFFDYYKLTDEHLGS 209


>Z81077-3|CAB03067.1|  527|Caenorhabditis elegans Hypothetical
           protein F36A2.2 protein.
          Length = 527

 Score = 26.2 bits (55), Expect = 3.3
 Identities = 12/40 (30%), Positives = 24/40 (60%)
 Frame = +2

Query: 89  SVAVATPAGLIYHPILFNADSRGIIDLSTTMKELAQKAKE 208
           +VA+ +  GL+Y+P++F+ D+   +D      E  + AK+
Sbjct: 282 AVAIMSAEGLLYNPLIFD-DANAHVDTWKIAAEYLEYAKK 320


>U97017-6|AAB52362.1|  374|Caenorhabditis elegans Hypothetical
           protein F47B3.7 protein.
          Length = 374

 Score = 25.8 bits (54), Expect = 4.4
 Identities = 12/37 (32%), Positives = 22/37 (59%)
 Frame = +2

Query: 158 IIDLSTTMKELAQKAKEGKLHPQEYQGGTVTVSNLGM 268
           +I+L+    E    A EG+ +    +G T+T++NLG+
Sbjct: 165 VIELARVKCEQYWPAVEGQTNTYVSKGHTITINNLGV 201


>Z68215-8|CAA92454.1|  318|Caenorhabditis elegans Hypothetical
           protein C53B4.6 protein.
          Length = 318

 Score = 25.4 bits (53), Expect = 5.8
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = +2

Query: 44  IGWIHSSNQYSHVDVSVAVATPAGLI 121
           +GWI  + QYS   +S  V   AG++
Sbjct: 106 MGWIIRNYQYSLKQISAVVVVTAGIV 131


>AL032652-8|CAA21706.1|  277|Caenorhabditis elegans Hypothetical
           protein Y63D3A.10 protein.
          Length = 277

 Score = 25.4 bits (53), Expect = 5.8
 Identities = 10/20 (50%), Positives = 11/20 (55%)
 Frame = -3

Query: 273 PIIPRFETVTVPPWYSCGCS 214
           P  P F  V  P +YSC CS
Sbjct: 248 PTHPPFSFVIAPHYYSCTCS 267


>Z81573-3|CAB04624.3|  398|Caenorhabditis elegans Hypothetical
           protein M02G9.2 protein.
          Length = 398

 Score = 25.0 bits (52), Expect = 7.7
 Identities = 19/64 (29%), Positives = 26/64 (40%), Gaps = 2/64 (3%)
 Frame = +1

Query: 16  CKRVPT--INSHWMDTFIKPIFPR*CKCSGGNTRRSNLPPDIVQCGLTRYHRLVDDHEGT 189
           C+ +PT  I    M     P  P  C C+ GN R     P +    L + +  V   E +
Sbjct: 40  CQVMPTPEIGGGQMICTCSPPVPPKCVCTEGNVRNIITGPSLP--ALFKPYNCVSTCESS 97

Query: 190 CTES 201
           C ES
Sbjct: 98  CLES 101


>U00058-3|AAD31933.1|  162|Caenorhabditis elegans Ground-like (grd
           related) protein22 protein.
          Length = 162

 Score = 25.0 bits (52), Expect = 7.7
 Identities = 11/21 (52%), Positives = 12/21 (57%)
 Frame = +1

Query: 124 PPDIVQCGLTRYHRLVDDHEG 186
           PP +  CG  R  R VDD EG
Sbjct: 58  PPPMCGCGCGRKKRSVDDVEG 78


>AF016663-3|AAC70878.1| 1170|Caenorhabditis elegans Hypothetical
           protein F21E9.1 protein.
          Length = 1170

 Score = 25.0 bits (52), Expect = 7.7
 Identities = 12/29 (41%), Positives = 19/29 (65%)
 Frame = +3

Query: 126 TRYCSMRTHAVSSTCRRP*RNLHRKLKRV 212
           T +C  ++ +VS +   P  N+HRKLKR+
Sbjct: 614 TLHCPTKSISVSKS-PSPYHNIHRKLKRL 641


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,134,581
Number of Sequences: 27780
Number of extensions: 137243
Number of successful extensions: 339
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 335
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 336
length of database: 12,740,198
effective HSP length: 69
effective length of database: 10,823,378
effective search space used: 238114316
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)