Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0013_L15
(275 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ... 24 0.40
S78458-1|AAB34402.1| 46|Apis mellifera apamin protein. 22 1.2
X72575-1|CAA51167.1| 168|Apis mellifera Apidaecin precursor pro... 22 1.6
DQ067178-1|AAZ20250.1| 448|Apis mellifera conserved ATPase doma... 21 2.1
X72577-1|CAA51169.1| 283|Apis mellifera Apidaecin precursor pro... 20 4.9
X72576-1|CAA51168.1| 144|Apis mellifera Apidaecin precursor pro... 20 4.9
DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholi... 20 6.5
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr... 20 6.5
DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride... 19 8.6
DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride... 19 8.6
DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride... 19 8.6
AY375535-1|AAQ82648.1| 147|Apis mellifera doublesex protein. 19 8.6
>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
protein.
Length = 1124
Score = 23.8 bits (49), Expect = 0.40
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = +2
Query: 65 NQYSHVDVSVAVATPAGLIYHPIL 136
N Y + VS T AG+IY P++
Sbjct: 826 NPYMFLPVSYMSTTMAGVIYPPVI 849
Score = 21.4 bits (43), Expect = 2.1
Identities = 7/12 (58%), Positives = 10/12 (83%)
Frame = -1
Query: 242 YLLGTLAGVVYP 207
Y+ T+AGV+YP
Sbjct: 835 YMSTTMAGVIYP 846
>S78458-1|AAB34402.1| 46|Apis mellifera apamin protein.
Length = 46
Score = 22.2 bits (45), Expect = 1.2
Identities = 8/18 (44%), Positives = 8/18 (44%)
Frame = -3
Query: 243 VPPWYSCGCSLPSLAFCA 190
V P C C P A CA
Sbjct: 22 VTPVMPCNCKAPETALCA 39
>X72575-1|CAA51167.1| 168|Apis mellifera Apidaecin precursor
protein.
Length = 168
Score = 21.8 bits (44), Expect = 1.6
Identities = 9/19 (47%), Positives = 11/19 (57%)
Frame = +1
Query: 214 TTPARVPRRYSNRLEPGND 270
T PAR+ R EPGN+
Sbjct: 27 TRPARLRREAKPEAEPGNN 45
>DQ067178-1|AAZ20250.1| 448|Apis mellifera conserved ATPase domain
protein protein.
Length = 448
Score = 21.4 bits (43), Expect = 2.1
Identities = 10/18 (55%), Positives = 11/18 (61%)
Frame = +3
Query: 165 TCRRP*RNLHRKLKRVNY 218
+C R RNL RK VNY
Sbjct: 402 SCLRELRNLGRKTIMVNY 419
>X72577-1|CAA51169.1| 283|Apis mellifera Apidaecin precursor
protein.
Length = 283
Score = 20.2 bits (40), Expect = 4.9
Identities = 8/19 (42%), Positives = 10/19 (52%)
Frame = +1
Query: 214 TTPARVPRRYSNRLEPGND 270
T P R+ R EPGN+
Sbjct: 26 TRPTRLRREAKPEAEPGNN 44
>X72576-1|CAA51168.1| 144|Apis mellifera Apidaecin precursor
protein.
Length = 144
Score = 20.2 bits (40), Expect = 4.9
Identities = 8/19 (42%), Positives = 10/19 (52%)
Frame = +1
Query: 214 TTPARVPRRYSNRLEPGND 270
T P R+ R EPGN+
Sbjct: 27 TRPTRLRREAEPEAEPGNN 45
>DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholine
receptor alpha9subunit protein.
Length = 431
Score = 19.8 bits (39), Expect = 6.5
Identities = 6/12 (50%), Positives = 10/12 (83%)
Frame = -1
Query: 200 LSVQVPSWSSTS 165
+S++VP W ST+
Sbjct: 342 MSIEVPYWISTT 353
>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
protein.
Length = 1308
Score = 19.8 bits (39), Expect = 6.5
Identities = 8/19 (42%), Positives = 10/19 (52%)
Frame = -3
Query: 234 WYSCGCSLPSLAFCASSFM 178
WYS S P+L A F+
Sbjct: 433 WYSLASSWPALVPLALGFL 451
>DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride
channel variant 4 protein.
Length = 489
Score = 19.4 bits (38), Expect = 8.6
Identities = 7/25 (28%), Positives = 16/25 (64%)
Frame = -1
Query: 122 KLDRRVLPPLHLHQRGNIGLMNVSI 48
+ D+R+LPP+ N+ ++ +S+
Sbjct: 73 RYDKRLLPPVQGTLTVNVSVLLLSL 97
>DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride
channel variant 3 protein.
Length = 475
Score = 19.4 bits (38), Expect = 8.6
Identities = 7/25 (28%), Positives = 16/25 (64%)
Frame = -1
Query: 122 KLDRRVLPPLHLHQRGNIGLMNVSI 48
+ D+R+LPP+ N+ ++ +S+
Sbjct: 73 RYDKRLLPPVQGTLTVNVSVLLLSL 97
>DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride
channel protein.
Length = 458
Score = 19.4 bits (38), Expect = 8.6
Identities = 7/25 (28%), Positives = 16/25 (64%)
Frame = -1
Query: 122 KLDRRVLPPLHLHQRGNIGLMNVSI 48
+ D+R+LPP+ N+ ++ +S+
Sbjct: 73 RYDKRLLPPVQGTLTVNVSVLLLSL 97
>AY375535-1|AAQ82648.1| 147|Apis mellifera doublesex protein.
Length = 147
Score = 19.4 bits (38), Expect = 8.6
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = -1
Query: 110 RVLPPLHLH 84
R LPPLH H
Sbjct: 99 RKLPPLHPH 107
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 89,914
Number of Sequences: 438
Number of extensions: 1742
Number of successful extensions: 13
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 48
effective length of database: 125,319
effective search space used: 5388717
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)
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