Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0013_L14
(649 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBP8B7.25 |cyp4||cyclophilin family peptidyl-prolyl cis-trans i... 170 1e-43
SPBC28F2.03 |ppi1|cyp2|cyclophilin family peptidyl-prolyl cis-tr... 151 8e-38
SPAC1B3.03c |wis2|cyp5|cyclophilin family peptidyl-prolyl cis-tr... 146 3e-36
SPBC1709.04c |cyp3||cyclophilin family peptidyl-prolyl cis-trans... 136 3e-33
SPAC57A10.03 |cyp1||cyclophilin family peptidyl-prolyl cis-trans... 121 1e-28
SPCC553.04 |cyp9||WD repeat containing cyclophilin family peptid... 100 2e-22
SPAC21E11.05c |cyp8||cyclophilin family peptidyl-prolyl cis-tran... 93 4e-20
SPBC16H5.05c |cyp7|cwf27|cyclophilin family peptidyl-prolyl cis-... 69 4e-13
SPBC17G9.05 |rct1|cyp6|RRM-containing cyclophilin regulating tra... 49 7e-07
SPBC23E6.02 |||ATP-dependent DNA helicase |Schizosaccharomyces p... 26 5.4
SPBC3H7.06c |pof9||F-box protein Paf9|Schizosaccharomyces pombe|... 25 9.4
>SPBP8B7.25 |cyp4||cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 201
Score = 170 bits (414), Expect = 1e-43
Identities = 81/133 (60%), Positives = 95/133 (71%)
Frame = -3
Query: 647 KTVPKTVDNFYQLAQKPEGEGYKGSKFHRVIDNFMIQXXXXXXXXXXXGRSIYGERFNDE 468
KTVPKT +NF LA +G GY+GS FHRVI NFMIQ G+SIYG RF DE
Sbjct: 50 KTVPKTAENFRALATGEKGFGYEGSIFHRVIPNFMIQGGDITKGDGTGGKSIYGSRFPDE 109
Query: 467 NFKLRHYGAGWLSMANAGKDTNGSQFFITTVKTPWLDGRHVVFGKIIEGMDVVRKIEKTV 288
NFKL H G LSMANAG D+NGSQFFITTVKTPWLDG HVVFG+++ G D+V+KI K
Sbjct: 110 NFKLSHQRPGLLSMANAGPDSNGSQFFITTVKTPWLDGHHVVFGEVLSGYDIVKKISKAE 169
Query: 287 TGANDRPVKDVVV 249
T D+P++DV +
Sbjct: 170 TDNRDKPLEDVKI 182
>SPBC28F2.03 |ppi1|cyp2|cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 162
Score = 151 bits (366), Expect = 8e-38
Identities = 75/133 (56%), Positives = 89/133 (66%)
Frame = -3
Query: 641 VPKTVDNFYQLAQKPEGEGYKGSKFHRVIDNFMIQXXXXXXXXXXXGRSIYGERFNDENF 462
VPKT NF L +G GY GS FHRVI FM+Q G+SIYGE+F DENF
Sbjct: 27 VPKTAANFRALCTGEKGYGYAGSTFHRVIPQFMLQGGDFTRGNGTGGKSIYGEKFPDENF 86
Query: 461 KLRHYGAGWLSMANAGKDTNGSQFFITTVKTPWLDGRHVVFGKIIEGMDVVRKIEKTVTG 282
L+H G LSMANAG +TNGSQFFITTV TPWLDG+HVVFG++ EGMDVV+K+E G
Sbjct: 87 ALKHNKPGLLSMANAGPNTNGSQFFITTVVTPWLDGKHVVFGEVTEGMDVVKKVES--LG 144
Query: 281 ANDRPVKDVVVAD 243
+N + +V D
Sbjct: 145 SNSGATRARIVID 157
>SPAC1B3.03c |wis2|cyp5|cyclophilin family peptidyl-prolyl cis-trans
isomerase Wis2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 356
Score = 146 bits (353), Expect = 3e-36
Identities = 79/140 (56%), Positives = 91/140 (65%), Gaps = 4/140 (2%)
Frame = -3
Query: 641 VPKTVDNFYQLAQKPEGEG----YKGSKFHRVIDNFMIQXXXXXXXXXXXGRSIYGERFN 474
VPKTV NF L E +G YKGS+FHRVI NFM+Q G SIYGE+F
Sbjct: 28 VPKTVKNFASLCNGFEKDGRCLTYKGSRFHRVIKNFMLQGGDFTRGNGTGGESIYGEKFE 87
Query: 473 DENFKLRHYGAGWLSMANAGKDTNGSQFFITTVKTPWLDGRHVVFGKIIEGMDVVRKIEK 294
DENF+L+H LSMANAG +TNGSQFFITTV TP LDG+HVVFGK+I+G VR IE
Sbjct: 88 DENFELKHDKPFLLSMANAGPNTNGSQFFITTVPTPHLDGKHVVFGKVIQGKSTVRTIEN 147
Query: 293 TVTGANDRPVKDVVVADTET 234
T ND PV VV+ + T
Sbjct: 148 LET-KNDDPVVPVVIEECGT 166
>SPBC1709.04c |cyp3||cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp3 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 173
Score = 136 bits (328), Expect = 3e-33
Identities = 72/142 (50%), Positives = 88/142 (61%), Gaps = 9/142 (6%)
Frame = -3
Query: 641 VPKTVDNFYQLA--------QKPEGEGYKGSKFHRVIDNFMIQXXXXXXXXXXXGRSIYG 486
VPKT +NF Q QKP G YK S FHR+I FMIQ +I+
Sbjct: 30 VPKTAENFRQFCTGETLGVNQKPIG--YKNSTFHRIIQGFMIQGGDFVSGDGTGSATIFN 87
Query: 485 ER-FNDENFKLRHYGAGWLSMANAGKDTNGSQFFITTVKTPWLDGRHVVFGKIIEGMDVV 309
R F DENF L+H G LSMANAGKD+NG QFFITTV +LDG+HVVFG++IEG D+V
Sbjct: 88 SRTFPDENFTLKHDRPGLLSMANAGKDSNGCQFFITTVPCDFLDGKHVVFGEVIEGYDIV 147
Query: 308 RKIEKTVTGANDRPVKDVVVAD 243
++IE T GAN RP +V + +
Sbjct: 148 KEIESTPVGANSRPKSNVAIVE 169
>SPAC57A10.03 |cyp1||cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 155
Score = 121 bits (291), Expect = 1e-28
Identities = 62/131 (47%), Positives = 85/131 (64%), Gaps = 1/131 (0%)
Frame = -3
Query: 638 PKTVDNFYQLAQKPEGEGYKGSKFHRVIDNFMIQXXXXXXXXXXXGRSIYGERFNDE-NF 462
PKT NFY LA+ EG Y G FHRVI +F+IQ SIYG++F+DE +
Sbjct: 23 PKTCQNFYTLAK--EGY-YDGVIFHRVIPDFVIQGGDPTGTGRGGT-SIYGDKFDDEIHS 78
Query: 461 KLRHYGAGWLSMANAGKDTNGSQFFITTVKTPWLDGRHVVFGKIIEGMDVVRKIEKTVTG 282
L H GAG LSMANAG +TN SQFFIT TPWLDG+H +FG+++ G+ V +++ T
Sbjct: 79 DLHHTGAGILSMANAGPNTNSSQFFITLAPTPWLDGKHTIFGRVVSGLSVCKRMGLIRTD 138
Query: 281 ANDRPVKDVVV 249
++DRP++ + +
Sbjct: 139 SSDRPIEPLKI 149
>SPCC553.04 |cyp9||WD repeat containing cyclophilin family
peptidyl-prolyl cis-trans isomerase
Cyp9|Schizosaccharomyces pombe|chr 3|||Manual
Length = 610
Score = 100 bits (239), Expect = 2e-22
Identities = 57/127 (44%), Positives = 74/127 (58%), Gaps = 1/127 (0%)
Frame = -3
Query: 638 PKTVDNFYQLAQKPEGEGYKGSKFHRVIDNFMIQXXXXXXXXXXXGRSIYGERFNDE-NF 462
PK V NF A E Y + FHR+I NFMIQ SI+ + F DE +
Sbjct: 476 PKAVQNFTTHA---ENGYYDNTIFHRIIKNFMIQGGDPLGDGTGG-ESIWKKDFEDEISP 531
Query: 461 KLRHYGAGWLSMANAGKDTNGSQFFITTVKTPWLDGRHVVFGKIIEGMDVVRKIEKTVTG 282
L+H +SMAN+G +TNGSQFFITT TPWLDG+H +F + G+DVV +IE+ T
Sbjct: 532 NLKHDRPFTVSMANSGPNTNGSQFFITTDLTPWLDGKHTIFARAYAGLDVVHRIEQGETD 591
Query: 281 ANDRPVK 261
DRP++
Sbjct: 592 KYDRPLE 598
>SPAC21E11.05c |cyp8||cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp8|Schizosaccharomyces pombe|chr 1|||Manual
Length = 516
Score = 92.7 bits (220), Expect = 4e-20
Identities = 53/133 (39%), Positives = 75/133 (56%), Gaps = 1/133 (0%)
Frame = -3
Query: 638 PKTVDNFYQLAQKPEGEGYKGSKFHRVIDNFMIQXXXXXXXXXXXGRSIYGERFNDENFK 459
P V NF QLA++ Y+ + FHR I FMIQ +SI+G+ F DE
Sbjct: 297 PHAVYNFVQLAKQGY---YRNTIFHRNIARFMIQGGDPSGTGRGG-QSIWGKPFKDEFCN 352
Query: 458 -LRHYGAGWLSMANAGKDTNGSQFFITTVKTPWLDGRHVVFGKIIEGMDVVRKIEKTVTG 282
L+H G +SMAN GK+TNGSQFFI LD +H +FG+++ G++V+ +EK T
Sbjct: 353 PLKHDDRGIISMANRGKNTNGSQFFILYGPAKHLDNKHTIFGRVVGGLNVLDALEKVPTN 412
Query: 281 ANDRPVKDVVVAD 243
+ND P + + D
Sbjct: 413 SNDHPKLPIKLED 425
>SPBC16H5.05c |cyp7|cwf27|cyclophilin family peptidyl-prolyl
cis-trans isomerase Cyp7|Schizosaccharomyces pombe|chr
2|||Manual
Length = 463
Score = 69.3 bits (162), Expect = 4e-13
Identities = 51/139 (36%), Positives = 68/139 (48%), Gaps = 2/139 (1%)
Frame = -3
Query: 647 KTVPKTVDNFYQLAQKPEGEGYKGSKFHRVIDNFMIQXXXXXXXXXXXGRSIYGERFNDE 468
K VPK NF QL EG Y G+ HRV+ F+IQ SIYGE F E
Sbjct: 31 KEVPKACRNFIQLCL--EGY-YDGTIVHRVVPEFLIQGGDPTGTGMGG-ESIYGEPFAVE 86
Query: 467 NF-KLRHYGAGWLSMANAGKDTNGSQFFITTVKTPWLDGRHVVFGKII-EGMDVVRKIEK 294
+LR G + MA + N SQFFIT TP +G+ +FG+++ + + V +I +
Sbjct: 87 THPRLRFIRRGLVGMACTENEGNNSQFFITLGPTPEWNGKQTLFGRVVGDTIYNVVRISE 146
Query: 293 TVTGANDRPVKDVVVADTE 237
AN RPV + TE
Sbjct: 147 LELDANQRPVFPPKIISTE 165
>SPBC17G9.05 |rct1|cyp6|RRM-containing cyclophilin regulating
transcription Rct1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 432
Score = 48.8 bits (111), Expect = 7e-07
Identities = 45/160 (28%), Positives = 71/160 (44%), Gaps = 15/160 (9%)
Frame = -3
Query: 647 KTVPKTVDNFYQLAQKPEGEGYKGSKFHRVIDNFMIQXXXXXXXXXXXGRSIY-----GE 483
K PKT +NF +L + + Y F+ + N+ Q GR ++ G
Sbjct: 19 KEAPKTCENFLKLCKL---KYYNFCPFYNIQHNYTCQTGDPLGPTGDGGRCVWNVLNKGT 75
Query: 482 RFNDENFK--LRHYGAGWLSMANA---GKDTN----GSQFFIT-TVKTPWLDGRHVVFGK 333
RF F L H G +SM+ A +D GSQF IT + LD R+ ++G+
Sbjct: 76 RFFKAEFNPSLVHNKMGLVSMSTATISSRDDKLLVCGSQFIITLSDNLEGLDERYPIYGQ 135
Query: 332 IIEGMDVVRKIEKTVTGANDRPVKDVVVADTETEIVSEPF 213
+ EG D + KI + +P +D+ + T I+ +PF
Sbjct: 136 VAEGFDTLLKINDAICDEEGQPYRDIRI--KHTIILDDPF 173
>SPBC23E6.02 |||ATP-dependent DNA helicase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1040
Score = 25.8 bits (54), Expect = 5.4
Identities = 13/56 (23%), Positives = 27/56 (48%)
Frame = -1
Query: 532 EILPRVMALVVGAFMENVSMMKTLSSAIMVLDGYQWLMLAKTQMDRXXXXXX*KPL 365
E+ P V L++ NV + T ++ +++LD + + + +DR KP+
Sbjct: 930 EVDPNVRVLLISLKAGNVGLNLTCANHVIILDPFWNPYIEEQAVDRAHRIGQDKPV 985
>SPBC3H7.06c |pof9||F-box protein Paf9|Schizosaccharomyces pombe|chr
2|||Manual
Length = 467
Score = 25.0 bits (52), Expect = 9.4
Identities = 8/21 (38%), Positives = 16/21 (76%)
Frame = +1
Query: 274 SLAPVTVFSILRTTSIPSIIF 336
++ P+T FSI+R + +P++ F
Sbjct: 434 NVPPITTFSIIRPSRVPALRF 454
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,352,328
Number of Sequences: 5004
Number of extensions: 43438
Number of successful extensions: 114
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 103
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 107
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 291768710
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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