Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0013_L13
(492 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF000262-9|AAN60529.1| 820|Caenorhabditis elegans Hypothetical ... 31 0.60
Z68760-10|CAL49442.1| 1427|Caenorhabditis elegans Hypothetical p... 30 0.79
Z68760-9|CAJ80808.1| 1379|Caenorhabditis elegans Hypothetical pr... 30 0.79
Z68760-8|CAA92996.1| 1398|Caenorhabditis elegans Hypothetical pr... 30 0.79
Z75955-13|CAB00113.2| 424|Caenorhabditis elegans Hypothetical p... 29 1.8
Z30974-5|CAH19087.1| 3183|Caenorhabditis elegans Hypothetical pr... 29 1.8
Z30974-4|CAA83226.2| 3767|Caenorhabditis elegans Hypothetical pr... 29 1.8
Z30423-15|CAH19103.1| 3183|Caenorhabditis elegans Hypothetical p... 29 1.8
Z30423-14|CAC42345.1| 3767|Caenorhabditis elegans Hypothetical p... 29 1.8
AF139060-1|AAD29428.1| 3767|Caenorhabditis elegans transmembrane... 29 1.8
Z81576-2|CAB04644.1| 522|Caenorhabditis elegans Hypothetical pr... 29 2.4
U13876-12|AAA21169.1| 363|Caenorhabditis elegans Hypothetical p... 27 5.6
AJ276590-1|CAB91651.1| 679|Caenorhabditis elegans LET-413 prote... 27 5.6
AF068716-10|AAC17752.2| 679|Caenorhabditis elegans Lethal prote... 27 5.6
AF068716-9|AAT81195.1| 699|Caenorhabditis elegans Lethal protei... 27 5.6
Z81079-8|CAD56581.2| 1175|Caenorhabditis elegans Hypothetical pr... 27 9.8
Z81079-7|CAD21643.1| 778|Caenorhabditis elegans Hypothetical pr... 27 9.8
Z81079-6|CAD21644.2| 1138|Caenorhabditis elegans Hypothetical pr... 27 9.8
Z81079-1|CAB03084.1| 650|Caenorhabditis elegans Hypothetical pr... 27 9.8
Z80215-18|CAD56563.2| 1175|Caenorhabditis elegans Hypothetical p... 27 9.8
Z80215-17|CAD21700.1| 778|Caenorhabditis elegans Hypothetical p... 27 9.8
Z80215-16|CAD21701.2| 1138|Caenorhabditis elegans Hypothetical p... 27 9.8
AF164959-3|AAD47825.1| 650|Caenorhabditis elegans CLE-1C protei... 27 9.8
AF164959-2|AAD47824.1| 778|Caenorhabditis elegans CLE-1B protei... 27 9.8
AF164959-1|AAD47823.1| 1117|Caenorhabditis elegans CLE-1A protei... 27 9.8
AF016674-4|AAB66130.1| 287|Caenorhabditis elegans Hypothetical ... 27 9.8
>AF000262-9|AAN60529.1| 820|Caenorhabditis elegans Hypothetical
protein C48E7.8 protein.
Length = 820
Score = 30.7 bits (66), Expect = 0.60
Identities = 17/40 (42%), Positives = 24/40 (60%)
Frame = -2
Query: 368 LSSLFSACSSLIWAIFSRTCSANVLWPTSLARSAAKRRDS 249
L +LF CSS W IFS TC ++ + T RS A++ +S
Sbjct: 332 LVNLFRVCSSF-WVIFSHTCLFSLHF-TDTIRSVARKGES 369
>Z68760-10|CAL49442.1| 1427|Caenorhabditis elegans Hypothetical
protein F36H1.2c protein.
Length = 1427
Score = 30.3 bits (65), Expect = 0.79
Identities = 30/100 (30%), Positives = 49/100 (49%), Gaps = 7/100 (7%)
Frame = +1
Query: 103 YMDSIAEEML--GTWASECDTIGNFVVSAACYIAQGNISSASIILGK-----SQNPESLR 261
Y D I E ++ G + ++CD GN+++++A + GN + +IL K Q+ E R
Sbjct: 238 YAD-ICESLINSGAFVNQCDRFGNWILTSA--VRSGNAAIVRMILDKFADINCQDSEK-R 293
Query: 262 LAADLAKLVGHNTFAEHVLEKIAQIKLEQAENSDDKLPKL 381
LA N A +LEK ++L +N D + P L
Sbjct: 294 TPLHLAIDKSFNDIAYILLEKKPNLEL---KNKDGETPLL 330
>Z68760-9|CAJ80808.1| 1379|Caenorhabditis elegans Hypothetical
protein F36H1.2b protein.
Length = 1379
Score = 30.3 bits (65), Expect = 0.79
Identities = 30/100 (30%), Positives = 49/100 (49%), Gaps = 7/100 (7%)
Frame = +1
Query: 103 YMDSIAEEML--GTWASECDTIGNFVVSAACYIAQGNISSASIILGK-----SQNPESLR 261
Y D I E ++ G + ++CD GN+++++A + GN + +IL K Q+ E R
Sbjct: 238 YAD-ICESLINSGAFVNQCDRFGNWILTSA--VRSGNAAIVRMILDKFADINCQDSEK-R 293
Query: 262 LAADLAKLVGHNTFAEHVLEKIAQIKLEQAENSDDKLPKL 381
LA N A +LEK ++L +N D + P L
Sbjct: 294 TPLHLAIDKSFNDIAYILLEKKPNLEL---KNKDGETPLL 330
>Z68760-8|CAA92996.1| 1398|Caenorhabditis elegans Hypothetical
protein F36H1.2a protein.
Length = 1398
Score = 30.3 bits (65), Expect = 0.79
Identities = 30/100 (30%), Positives = 49/100 (49%), Gaps = 7/100 (7%)
Frame = +1
Query: 103 YMDSIAEEML--GTWASECDTIGNFVVSAACYIAQGNISSASIILGK-----SQNPESLR 261
Y D I E ++ G + ++CD GN+++++A + GN + +IL K Q+ E R
Sbjct: 238 YAD-ICESLINSGAFVNQCDRFGNWILTSA--VRSGNAAIVRMILDKFADINCQDSEK-R 293
Query: 262 LAADLAKLVGHNTFAEHVLEKIAQIKLEQAENSDDKLPKL 381
LA N A +LEK ++L +N D + P L
Sbjct: 294 TPLHLAIDKSFNDIAYILLEKKPNLEL---KNKDGETPLL 330
>Z75955-13|CAB00113.2| 424|Caenorhabditis elegans Hypothetical
protein R07B7.4 protein.
Length = 424
Score = 29.1 bits (62), Expect = 1.8
Identities = 14/34 (41%), Positives = 20/34 (58%)
Frame = -1
Query: 369 FIIAILSLFKFNLGYFLENVLCECIVAD*FSQVC 268
FII+++SLF + LGY N+ C+ S VC
Sbjct: 386 FIISVISLFWYLLGYCRGNLQAYCLQCAVVSGVC 419
>Z30974-5|CAH19087.1| 3183|Caenorhabditis elegans Hypothetical
protein K08E5.3b protein.
Length = 3183
Score = 29.1 bits (62), Expect = 1.8
Identities = 16/57 (28%), Positives = 31/57 (54%)
Frame = +1
Query: 199 QGNISSASIILGKSQNPESLRLAADLAKLVGHNTFAEHVLEKIAQIKLEQAENSDDK 369
Q +I+ +IIL ++ +++ AD A+ + NTFA V + + +LE S ++
Sbjct: 748 QSDIARVAIILTDGRSQDNVTGPADSARKLSINTFAIGVTDHVLASELESIAGSPNR 804
>Z30974-4|CAA83226.2| 3767|Caenorhabditis elegans Hypothetical protein
K08E5.3a protein.
Length = 3767
Score = 29.1 bits (62), Expect = 1.8
Identities = 16/57 (28%), Positives = 31/57 (54%)
Frame = +1
Query: 199 QGNISSASIILGKSQNPESLRLAADLAKLVGHNTFAEHVLEKIAQIKLEQAENSDDK 369
Q +I+ +IIL ++ +++ AD A+ + NTFA V + + +LE S ++
Sbjct: 1332 QSDIARVAIILTDGRSQDNVTGPADSARKLSINTFAIGVTDHVLASELESIAGSPNR 1388
>Z30423-15|CAH19103.1| 3183|Caenorhabditis elegans Hypothetical
protein K08E5.3b protein.
Length = 3183
Score = 29.1 bits (62), Expect = 1.8
Identities = 16/57 (28%), Positives = 31/57 (54%)
Frame = +1
Query: 199 QGNISSASIILGKSQNPESLRLAADLAKLVGHNTFAEHVLEKIAQIKLEQAENSDDK 369
Q +I+ +IIL ++ +++ AD A+ + NTFA V + + +LE S ++
Sbjct: 748 QSDIARVAIILTDGRSQDNVTGPADSARKLSINTFAIGVTDHVLASELESIAGSPNR 804
>Z30423-14|CAC42345.1| 3767|Caenorhabditis elegans Hypothetical
protein K08E5.3a protein.
Length = 3767
Score = 29.1 bits (62), Expect = 1.8
Identities = 16/57 (28%), Positives = 31/57 (54%)
Frame = +1
Query: 199 QGNISSASIILGKSQNPESLRLAADLAKLVGHNTFAEHVLEKIAQIKLEQAENSDDK 369
Q +I+ +IIL ++ +++ AD A+ + NTFA V + + +LE S ++
Sbjct: 1332 QSDIARVAIILTDGRSQDNVTGPADSARKLSINTFAIGVTDHVLASELESIAGSPNR 1388
>AF139060-1|AAD29428.1| 3767|Caenorhabditis elegans transmembrane cell
adhesion receptorMUA-3 precursor protein.
Length = 3767
Score = 29.1 bits (62), Expect = 1.8
Identities = 16/57 (28%), Positives = 31/57 (54%)
Frame = +1
Query: 199 QGNISSASIILGKSQNPESLRLAADLAKLVGHNTFAEHVLEKIAQIKLEQAENSDDK 369
Q +I+ +IIL ++ +++ AD A+ + NTFA V + + +LE S ++
Sbjct: 1332 QSDIARVAIILTDGRSQDNVTGPADSARKLSINTFAIGVTDHVLASELESIAGSPNR 1388
>Z81576-2|CAB04644.1| 522|Caenorhabditis elegans Hypothetical
protein R10E8.3 protein.
Length = 522
Score = 28.7 bits (61), Expect = 2.4
Identities = 15/40 (37%), Positives = 23/40 (57%)
Frame = +1
Query: 208 ISSASIILGKSQNPESLRLAADLAKLVGHNTFAEHVLEKI 327
+SSA ++ + +P S+ DL KL GH EH+LE +
Sbjct: 206 VSSAQML--QETHPSSIP-TFDLVKLTGHQPVIEHILESL 242
>U13876-12|AAA21169.1| 363|Caenorhabditis elegans Hypothetical
protein F57B9.3 protein.
Length = 363
Score = 27.5 bits (58), Expect = 5.6
Identities = 12/27 (44%), Positives = 17/27 (62%), Gaps = 1/27 (3%)
Frame = +3
Query: 129 VRHLGIRMRHD-WKFCCICCLLHSPRE 206
+R I ++ D WKF C+C LL + RE
Sbjct: 201 IRQFYINVQKDEWKFNCLCDLLKTSRE 227
>AJ276590-1|CAB91651.1| 679|Caenorhabditis elegans LET-413 protein
protein.
Length = 679
Score = 27.5 bits (58), Expect = 5.6
Identities = 24/81 (29%), Positives = 38/81 (46%)
Frame = +1
Query: 154 DTIGNFVVSAACYIAQGNISSASIILGKSQNPESLRLAADLAKLVGHNTFAEHVLEKIAQ 333
DTIGN + Q ++ + +GK +N L +A++ KL H F VL K+
Sbjct: 329 DTIGNCKSLTVLSLRQNILTELPMTIGKCENLTVLDVASN--KL-PHLPFTVKVLYKLQA 385
Query: 334 IKLEQAENSDDKLPKLTSRAD 396
+ L +EN + KL+ D
Sbjct: 386 LWL--SENQTQSILKLSETRD 404
>AF068716-10|AAC17752.2| 679|Caenorhabditis elegans Lethal protein
413, isoform a protein.
Length = 679
Score = 27.5 bits (58), Expect = 5.6
Identities = 24/81 (29%), Positives = 38/81 (46%)
Frame = +1
Query: 154 DTIGNFVVSAACYIAQGNISSASIILGKSQNPESLRLAADLAKLVGHNTFAEHVLEKIAQ 333
DTIGN + Q ++ + +GK +N L +A++ KL H F VL K+
Sbjct: 329 DTIGNCKSLTVLSLRQNILTELPMTIGKCENLTVLDVASN--KL-PHLPFTVKVLYKLQA 385
Query: 334 IKLEQAENSDDKLPKLTSRAD 396
+ L +EN + KL+ D
Sbjct: 386 LWL--SENQTQSILKLSETRD 404
>AF068716-9|AAT81195.1| 699|Caenorhabditis elegans Lethal protein
413, isoform b protein.
Length = 699
Score = 27.5 bits (58), Expect = 5.6
Identities = 24/81 (29%), Positives = 38/81 (46%)
Frame = +1
Query: 154 DTIGNFVVSAACYIAQGNISSASIILGKSQNPESLRLAADLAKLVGHNTFAEHVLEKIAQ 333
DTIGN + Q ++ + +GK +N L +A++ KL H F VL K+
Sbjct: 329 DTIGNCKSLTVLSLRQNILTELPMTIGKCENLTVLDVASN--KL-PHLPFTVKVLYKLQA 385
Query: 334 IKLEQAENSDDKLPKLTSRAD 396
+ L +EN + KL+ D
Sbjct: 386 LWL--SENQTQSILKLSETRD 404
>Z81079-8|CAD56581.2| 1175|Caenorhabditis elegans Hypothetical
protein C36B1.1d protein.
Length = 1175
Score = 26.6 bits (56), Expect = 9.8
Identities = 11/38 (28%), Positives = 20/38 (52%)
Frame = +1
Query: 307 EHVLEKIAQIKLEQAENSDDKLPKLTSRADAIATRGEE 420
E + ++A I+ E E LP+ S+ + T+GE+
Sbjct: 826 ERIARRVASIQKESNEPMRGDLPEYNSKVHSFTTKGEK 863
>Z81079-7|CAD21643.1| 778|Caenorhabditis elegans Hypothetical
protein C36B1.1b protein.
Length = 778
Score = 26.6 bits (56), Expect = 9.8
Identities = 11/38 (28%), Positives = 20/38 (52%)
Frame = +1
Query: 307 EHVLEKIAQIKLEQAENSDDKLPKLTSRADAIATRGEE 420
E + ++A I+ E E LP+ S+ + T+GE+
Sbjct: 429 ERIARRVASIQKESNEPMRGDLPEYNSKVHSFTTKGEK 466
>Z81079-6|CAD21644.2| 1138|Caenorhabditis elegans Hypothetical
protein C36B1.1a protein.
Length = 1138
Score = 26.6 bits (56), Expect = 9.8
Identities = 11/38 (28%), Positives = 20/38 (52%)
Frame = +1
Query: 307 EHVLEKIAQIKLEQAENSDDKLPKLTSRADAIATRGEE 420
E + ++A I+ E E LP+ S+ + T+GE+
Sbjct: 789 ERIARRVASIQKESNEPMRGDLPEYNSKVHSFTTKGEK 826
>Z81079-1|CAB03084.1| 650|Caenorhabditis elegans Hypothetical
protein C36B1.1c protein.
Length = 650
Score = 26.6 bits (56), Expect = 9.8
Identities = 11/38 (28%), Positives = 20/38 (52%)
Frame = +1
Query: 307 EHVLEKIAQIKLEQAENSDDKLPKLTSRADAIATRGEE 420
E + ++A I+ E E LP+ S+ + T+GE+
Sbjct: 301 ERIARRVASIQKESNEPMRGDLPEYNSKVHSFTTKGEK 338
>Z80215-18|CAD56563.2| 1175|Caenorhabditis elegans Hypothetical
protein C36B1.1d protein.
Length = 1175
Score = 26.6 bits (56), Expect = 9.8
Identities = 11/38 (28%), Positives = 20/38 (52%)
Frame = +1
Query: 307 EHVLEKIAQIKLEQAENSDDKLPKLTSRADAIATRGEE 420
E + ++A I+ E E LP+ S+ + T+GE+
Sbjct: 826 ERIARRVASIQKESNEPMRGDLPEYNSKVHSFTTKGEK 863
>Z80215-17|CAD21700.1| 778|Caenorhabditis elegans Hypothetical
protein C36B1.1b protein.
Length = 778
Score = 26.6 bits (56), Expect = 9.8
Identities = 11/38 (28%), Positives = 20/38 (52%)
Frame = +1
Query: 307 EHVLEKIAQIKLEQAENSDDKLPKLTSRADAIATRGEE 420
E + ++A I+ E E LP+ S+ + T+GE+
Sbjct: 429 ERIARRVASIQKESNEPMRGDLPEYNSKVHSFTTKGEK 466
>Z80215-16|CAD21701.2| 1138|Caenorhabditis elegans Hypothetical
protein C36B1.1a protein.
Length = 1138
Score = 26.6 bits (56), Expect = 9.8
Identities = 11/38 (28%), Positives = 20/38 (52%)
Frame = +1
Query: 307 EHVLEKIAQIKLEQAENSDDKLPKLTSRADAIATRGEE 420
E + ++A I+ E E LP+ S+ + T+GE+
Sbjct: 789 ERIARRVASIQKESNEPMRGDLPEYNSKVHSFTTKGEK 826
>AF164959-3|AAD47825.1| 650|Caenorhabditis elegans CLE-1C protein
protein.
Length = 650
Score = 26.6 bits (56), Expect = 9.8
Identities = 11/38 (28%), Positives = 20/38 (52%)
Frame = +1
Query: 307 EHVLEKIAQIKLEQAENSDDKLPKLTSRADAIATRGEE 420
E + ++A I+ E E LP+ S+ + T+GE+
Sbjct: 301 ERIARRVASIQKESNEPMRGDLPEYNSKVHSFTTKGEK 338
>AF164959-2|AAD47824.1| 778|Caenorhabditis elegans CLE-1B protein
protein.
Length = 778
Score = 26.6 bits (56), Expect = 9.8
Identities = 11/38 (28%), Positives = 20/38 (52%)
Frame = +1
Query: 307 EHVLEKIAQIKLEQAENSDDKLPKLTSRADAIATRGEE 420
E + ++A I+ E E LP+ S+ + T+GE+
Sbjct: 429 ERIARRVASIQKESNEPMRGDLPEYNSKVHSFTTKGEK 466
>AF164959-1|AAD47823.1| 1117|Caenorhabditis elegans CLE-1A protein
protein.
Length = 1117
Score = 26.6 bits (56), Expect = 9.8
Identities = 11/38 (28%), Positives = 20/38 (52%)
Frame = +1
Query: 307 EHVLEKIAQIKLEQAENSDDKLPKLTSRADAIATRGEE 420
E + ++A I+ E E LP+ S+ + T+GE+
Sbjct: 768 ERIARRVASIQKESNEPMRGDLPEYNSKVHSFTTKGEK 805
>AF016674-4|AAB66130.1| 287|Caenorhabditis elegans Hypothetical
protein C03H5.3 protein.
Length = 287
Score = 26.6 bits (56), Expect = 9.8
Identities = 18/44 (40%), Positives = 24/44 (54%)
Frame = +1
Query: 235 KSQNPESLRLAADLAKLVGHNTFAEHVLEKIAQIKLEQAENSDD 366
K + P SLR + LAK G N+ AE + E+ +I ENS D
Sbjct: 46 KEKLPISLRKSERLAKNSGENSSAE-IAEEHKEIVAPSQENSVD 88
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,313,135
Number of Sequences: 27780
Number of extensions: 194049
Number of successful extensions: 542
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 515
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 542
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 924715866
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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