Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0013_L12
         (572 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ441131-5|CAD29634.1|  574|Anopheles gambiae putative Na+ chann...    27   0.43 
AJ439398-4|CAD28127.1|  572|Anopheles gambiae putative sodium ch...    27   0.43 
AY263176-1|AAP78791.1|  705|Anopheles gambiae TmcB-like protein ...    23   7.1  
AJ010195-1|CAA09034.1|  687|Anopheles gambiae prophenoloxidase p...    23   7.1  
AF004916-1|AAB94672.1|  686|Anopheles gambiae pro-phenol oxidase...    23   7.1  

>AJ441131-5|CAD29634.1|  574|Anopheles gambiae putative Na+ channel
           protein.
          Length = 574

 Score = 27.1 bits (57), Expect = 0.43
 Identities = 12/36 (33%), Positives = 20/36 (55%)
 Frame = +2

Query: 125 KLCEDYQRLLRSNQLFKLESRNEGLLCTFGTITESY 232
           K C   ++  R +++F+    +EGL CTF T+   Y
Sbjct: 185 KACRYAKQPERCSEIFQSIFTDEGLCCTFNTLDTVY 220


>AJ439398-4|CAD28127.1|  572|Anopheles gambiae putative sodium
           channel protein.
          Length = 572

 Score = 27.1 bits (57), Expect = 0.43
 Identities = 12/36 (33%), Positives = 20/36 (55%)
 Frame = +2

Query: 125 KLCEDYQRLLRSNQLFKLESRNEGLLCTFGTITESY 232
           K C   ++  R +++F+    +EGL CTF T+   Y
Sbjct: 185 KACRYAKQPERCSEIFQSIFTDEGLCCTFNTLDTVY 220


>AY263176-1|AAP78791.1|  705|Anopheles gambiae TmcB-like protein
           protein.
          Length = 705

 Score = 23.0 bits (47), Expect = 7.1
 Identities = 10/19 (52%), Positives = 12/19 (63%)
 Frame = -1

Query: 146 VDNLRKV*HHRLNGPHDRY 90
           +D +  V   RLNGP DRY
Sbjct: 648 LDRIELVGGGRLNGPADRY 666


>AJ010195-1|CAA09034.1|  687|Anopheles gambiae prophenoloxidase
           protein.
          Length = 687

 Score = 23.0 bits (47), Expect = 7.1
 Identities = 8/16 (50%), Positives = 13/16 (81%)
 Frame = +1

Query: 508 NVSITYWKRTRIRVRT 555
           NV +TYW+R++I + T
Sbjct: 449 NVLLTYWQRSQIDLGT 464


>AF004916-1|AAB94672.1|  686|Anopheles gambiae pro-phenol oxidase
           subunit 2 protein.
          Length = 686

 Score = 23.0 bits (47), Expect = 7.1
 Identities = 7/16 (43%), Positives = 13/16 (81%)
 Frame = +1

Query: 508 NVSITYWKRTRIRVRT 555
           NV +TYW+R+++ + T
Sbjct: 448 NVLLTYWQRSQVDLAT 463


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 576,716
Number of Sequences: 2352
Number of extensions: 10187
Number of successful extensions: 35
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 35
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 54245403
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)