Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0013_L09
(479 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P41042 Cluster: 40S ribosomal protein S4; n=38; Eukaryo... 230 1e-59
UniRef50_P62701 Cluster: 40S ribosomal protein S4, X isoform; n=... 224 7e-58
UniRef50_UPI000065EA48 Cluster: similar to 40S ribosomal protein... 221 5e-57
UniRef50_UPI00005A08FF Cluster: PREDICTED: similar to 40S riboso... 199 2e-50
UniRef50_P49204 Cluster: 40S ribosomal protein S4-2; n=55; Eukar... 193 2e-48
UniRef50_UPI0000499069 Cluster: 40S ribosomal protein S4; n=2; E... 163 1e-39
UniRef50_UPI00006CBCC9 Cluster: Ribosomal family S4e containing ... 158 5e-38
UniRef50_Q9XG32 Cluster: 40S ribosomal protein S4; n=1; Guillard... 142 4e-33
UniRef50_A2ECC6 Cluster: 40S ribosomal protein S4-C, putative; n... 131 9e-30
UniRef50_UPI0000D9EB72 Cluster: PREDICTED: similar to 40S riboso... 128 8e-29
UniRef50_Q7KJQ3 Cluster: 40S ribosomal protein S4; n=9; Eukaryot... 122 4e-27
UniRef50_Q00TF1 Cluster: Chromosome 17 contig 1, DNA sequence; n... 79 4e-14
UniRef50_Q9YF85 Cluster: 30S ribosomal protein S4e; n=4; Desulfu... 62 6e-09
UniRef50_Q8SRB9 Cluster: 40S RIBOSOMAL PROTEIN S4; n=1; Encephal... 60 3e-08
UniRef50_Q56230 Cluster: 30S ribosomal protein S4e; n=3; Thermop... 56 4e-07
UniRef50_Q40941 Cluster: 40S ribosomal protein S4; n=2; Bigelowi... 55 7e-07
UniRef50_Q6L1B5 Cluster: 30S ribosomal protein S4e; n=1; Picroph... 53 3e-06
UniRef50_P62428 Cluster: 30S ribosomal protein S4e; n=12; Euryar... 49 5e-05
UniRef50_A5BV74 Cluster: Putative uncharacterized protein; n=1; ... 47 2e-04
UniRef50_A3CT09 Cluster: Ribosomal protein S4E, central; n=3; Me... 46 3e-04
UniRef50_Q6Y3G3 Cluster: RecA; n=2; Desulfuromonadales|Rep: RecA... 44 0.002
UniRef50_A5UL76 Cluster: Ribosomal protein S4e; n=2; Methanobact... 42 0.007
UniRef50_Q12ZT9 Cluster: Ribosomal protein S4E; n=1; Methanococc... 41 0.017
UniRef50_Q8PV38 Cluster: 30S ribosomal protein S4e; n=4; Euryarc... 39 0.067
UniRef50_A0RVY5 Cluster: Ribosomal protein S4E; n=2; Thermoprote... 38 0.088
UniRef50_UPI000038E22A Cluster: hypothetical protein Faci_030011... 38 0.12
UniRef50_A0TIU6 Cluster: Putative uncharacterized protein; n=1; ... 38 0.12
UniRef50_Q0W1X6 Cluster: 30S ribosomal protein S4E; n=2; Euryarc... 36 0.36
UniRef50_Q8XT76 Cluster: 1,4-alpha-glucan-branching enzyme; n=12... 36 0.36
UniRef50_Q3WHX0 Cluster: Putative uncharacterized protein; n=1; ... 35 0.82
UniRef50_A3H986 Cluster: Ribosomal protein S4E; n=1; Caldivirga ... 35 0.82
UniRef50_Q4RIW1 Cluster: Chromosome undetermined SCAF15041, whol... 35 1.1
UniRef50_Q2S3S1 Cluster: Tetratricopeptide repeat family; n=1; S... 35 1.1
UniRef50_A1WVF4 Cluster: CBS domain containing protein precursor... 34 1.4
UniRef50_A3BE82 Cluster: Putative uncharacterized protein; n=1; ... 34 1.4
UniRef50_Q673R6 Cluster: Ribosomal protein S4; n=2; environmenta... 34 1.4
UniRef50_UPI0000383638 Cluster: COG2931: RTX toxins and related ... 33 2.5
UniRef50_UPI0000ECB83B Cluster: Uncharacterized protein C21orf70... 33 2.5
UniRef50_Q3JN86 Cluster: Putative uncharacterized protein; n=2; ... 33 2.5
UniRef50_Q6Y3D2 Cluster: NifD; n=1; Desulfuromonas chloroethenic... 33 2.5
UniRef50_A6GI42 Cluster: Serine/threonine protein kinase; n=1; P... 33 2.5
UniRef50_Q6P3E2 Cluster: Immediate early response 5-like; n=2; E... 33 2.5
UniRef50_Q3W8J3 Cluster: Putative oxidoreductase; n=1; Frankia s... 29 2.9
UniRef50_UPI00006C16E3 Cluster: PREDICTED: hypothetical protein;... 33 3.3
UniRef50_UPI000059FCA3 Cluster: PREDICTED: similar to chromosome... 33 3.3
UniRef50_Q8FTQ3 Cluster: Putative uncharacterized protein; n=1; ... 33 3.3
UniRef50_Q4IVL7 Cluster: Putative uncharacterized protein precur... 33 3.3
UniRef50_A5NNX2 Cluster: Putative uncharacterized protein; n=1; ... 33 3.3
UniRef50_A7SCV5 Cluster: Predicted protein; n=2; Nematostella ve... 33 3.3
UniRef50_UPI0000D5573E Cluster: PREDICTED: similar to Tyrosine-p... 33 4.4
UniRef50_UPI000023E164 Cluster: hypothetical protein FG03308.1; ... 33 4.4
UniRef50_Q4RIY1 Cluster: Chromosome undetermined SCAF15041, whol... 33 4.4
UniRef50_A5NUY4 Cluster: Phosphoribosylformylglycinamidine synth... 33 4.4
UniRef50_A0VDJ9 Cluster: PE-PGRS family protein; n=1; Delftia ac... 33 4.4
UniRef50_Q6UNT1 Cluster: Melanocortin 1 receptor; n=6; Sus scrof... 33 4.4
UniRef50_Q5T953 Cluster: Immediate early response 5-like protein... 33 4.4
UniRef50_UPI0000E212EB Cluster: PREDICTED: hypothetical protein;... 32 5.8
UniRef50_Q2S2F3 Cluster: Phage integrase, N-terminal SAM-like do... 32 5.8
UniRef50_Q3W7E3 Cluster: Putative uncharacterized protein; n=1; ... 32 5.8
UniRef50_A5NR04 Cluster: TspO and MBR like protein; n=3; Alphapr... 32 5.8
UniRef50_A0CK45 Cluster: Chromosome undetermined scaffold_2, who... 32 5.8
UniRef50_Q6CB67 Cluster: Similar to sp|Q15166 Homo sapiens Serum... 32 5.8
UniRef50_Q5KET3 Cluster: Putative uncharacterized protein; n=2; ... 32 5.8
UniRef50_Q52NW9 Cluster: Wee1; n=2; Ustilago maydis|Rep: Wee1 - ... 32 5.8
UniRef50_Q0CZ31 Cluster: Predicted protein; n=1; Aspergillus ter... 32 5.8
UniRef50_UPI00015B412D Cluster: PREDICTED: similar to vrille; n=... 32 7.7
UniRef50_UPI0000DC0B02 Cluster: UPI0000DC0B02 related cluster; n... 32 7.7
UniRef50_Q64G86 Cluster: Envelope glycoprotein; n=2; Human immun... 32 7.7
UniRef50_Q8UW50 Cluster: G-2 and S-phase expressed 1; n=2; Takif... 32 7.7
UniRef50_Q4T179 Cluster: Chromosome undetermined SCAF10701, whol... 32 7.7
UniRef50_Q3VZN6 Cluster: Putative uncharacterized protein; n=1; ... 32 7.7
UniRef50_Q0SEA8 Cluster: Probable isochorismatase; n=1; Rhodococ... 32 7.7
UniRef50_Q08YV0 Cluster: Thioesterase family protein; n=2; Cysto... 32 7.7
UniRef50_A7DEP5 Cluster: Putative uncharacterized protein; n=1; ... 32 7.7
UniRef50_A6W4D1 Cluster: Diguanylate cyclase/phosphodiesterase w... 32 7.7
UniRef50_A5P3I0 Cluster: Inner-membrane translocator; n=3; Alpha... 32 7.7
UniRef50_A4FFP2 Cluster: Putative uncharacterized protein; n=1; ... 32 7.7
UniRef50_A0U838 Cluster: Putative uncharacterized protein; n=2; ... 32 7.7
UniRef50_Q5BBP8 Cluster: Putative uncharacterized protein; n=1; ... 32 7.7
UniRef50_Q8N8D1 Cluster: Programmed cell death protein 7; n=13; ... 32 7.7
UniRef50_Q9AAL4 Cluster: N-succinylarginine dihydrolase 1; n=9; ... 32 7.7
>UniRef50_P41042 Cluster: 40S ribosomal protein S4; n=38;
Eukaryota|Rep: 40S ribosomal protein S4 - Drosophila
melanogaster (Fruit fly)
Length = 261
Score = 230 bits (563), Expect = 1e-59
Identities = 103/133 (77%), Positives = 118/133 (88%)
Frame = +1
Query: 10 RRVATGPKSVPYLVTHDGRTLRYPDPLIKVNDSVQLDISTNKIMDFIKFDSGNLCMITGG 189
++ G K VP+LVTHDGRT+RYPDPLI NDSVQ+DI++ KI D+IKFDSGNLCMITGG
Sbjct: 127 KKTQLGAKGVPFLVTHDGRTIRYPDPLIHANDSVQVDIASGKITDYIKFDSGNLCMITGG 186
Query: 190 RNLGRVGTIVSRERHPGSFDIVHVKDSTGHTFATRLNNVFIIGNGTKAYISLPRGKGVRL 369
RNLGRVGT+V+RERHPGSFDIVH+KDS GH FATRL NVFIIG G K YISLP+GKGV+L
Sbjct: 187 RNLGRVGTVVNRERHPGSFDIVHIKDSQGHVFATRLTNVFIIGKGNKPYISLPKGKGVKL 246
Query: 370 TIAEERDKRIAAK 408
+IAEERDKR+AAK
Sbjct: 247 SIAEERDKRLAAK 259
>UniRef50_P62701 Cluster: 40S ribosomal protein S4, X isoform;
n=137; Eukaryota|Rep: 40S ribosomal protein S4, X
isoform - Homo sapiens (Human)
Length = 263
Score = 224 bits (548), Expect = 7e-58
Identities = 95/133 (71%), Positives = 118/133 (88%)
Frame = +1
Query: 10 RRVATGPKSVPYLVTHDGRTLRYPDPLIKVNDSVQLDISTNKIMDFIKFDSGNLCMITGG 189
R++ G K +P+LVTHD RT+RYPDPLIKVND++Q+D+ T KI DFIKFD+GNLCM+TGG
Sbjct: 127 RKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGG 186
Query: 190 RNLGRVGTIVSRERHPGSFDIVHVKDSTGHTFATRLNNVFIIGNGTKAYISLPRGKGVRL 369
NLGR+G I +RERHPGSFD+VHVKD+ G++FATRL+N+F+IG G K +ISLPRGKG+RL
Sbjct: 187 ANLGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWISLPRGKGIRL 246
Query: 370 TIAEERDKRIAAK 408
TIAEERDKR+AAK
Sbjct: 247 TIAEERDKRLAAK 259
>UniRef50_UPI000065EA48 Cluster: similar to 40S ribosomal protein
S4, X isoform (LOC126235), mRNA; n=1; Takifugu
rubripes|Rep: similar to 40S ribosomal protein S4, X
isoform (LOC126235), mRNA - Takifugu rubripes
Length = 291
Score = 221 bits (541), Expect = 5e-57
Identities = 93/133 (69%), Positives = 118/133 (88%)
Frame = +1
Query: 10 RRVATGPKSVPYLVTHDGRTLRYPDPLIKVNDSVQLDISTNKIMDFIKFDSGNLCMITGG 189
+++ G K +P+LVTHD RT+RYPDPLIKVND+V++D+ T KI DFIKFD+ N+CM+TGG
Sbjct: 159 KKILIGTKGIPHLVTHDARTIRYPDPLIKVNDTVRIDLDTGKITDFIKFDTSNMCMVTGG 218
Query: 190 RNLGRVGTIVSRERHPGSFDIVHVKDSTGHTFATRLNNVFIIGNGTKAYISLPRGKGVRL 369
NLGR+G I +RERHPGSFD+VHVKDSTG++FATRL+N+F+IG G K ++SLPRGKG+RL
Sbjct: 219 ANLGRIGVITNRERHPGSFDVVHVKDSTGNSFATRLSNIFVIGKGNKPWVSLPRGKGIRL 278
Query: 370 TIAEERDKRIAAK 408
TIAEERDKR+AAK
Sbjct: 279 TIAEERDKRLAAK 291
>UniRef50_UPI00005A08FF Cluster: PREDICTED: similar to 40S ribosomal
protein S4, X isoform; n=3; Eutheria|Rep: PREDICTED:
similar to 40S ribosomal protein S4, X isoform - Canis
familiaris
Length = 240
Score = 199 bits (486), Expect = 2e-50
Identities = 82/128 (64%), Positives = 107/128 (83%)
Frame = +1
Query: 10 RRVATGPKSVPYLVTHDGRTLRYPDPLIKVNDSVQLDISTNKIMDFIKFDSGNLCMITGG 189
R++ G K +P+LVTHD RT+RYPDPLIK+ND++Q+D+ T KI DF KFD+GNLCM+TGG
Sbjct: 99 RKIFVGTKGIPHLVTHDARTIRYPDPLIKMNDTIQIDLETGKITDFFKFDTGNLCMVTGG 158
Query: 190 RNLGRVGTIVSRERHPGSFDIVHVKDSTGHTFATRLNNVFIIGNGTKAYISLPRGKGVRL 369
NLGR+G I +RE HPGSFD+VHVKD+ G++FATRL+N+F+IG G +ISLP GKG+R
Sbjct: 159 TNLGRIGVITNRENHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNIPWISLPHGKGIRF 218
Query: 370 TIAEERDK 393
TIAEE+ +
Sbjct: 219 TIAEEKKR 226
>UniRef50_P49204 Cluster: 40S ribosomal protein S4-2; n=55;
Eukaryota|Rep: 40S ribosomal protein S4-2 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 262
Score = 193 bits (470), Expect = 2e-48
Identities = 83/135 (61%), Positives = 110/135 (81%)
Frame = +1
Query: 10 RRVATGPKSVPYLVTHDGRTLRYPDPLIKVNDSVQLDISTNKIMDFIKFDSGNLCMITGG 189
R + G K +PYL T+DGRT+RYPDPLIK ND+++LD+ NKI++FIKFD GN+ M+TGG
Sbjct: 127 RSIQFGQKGIPYLNTYDGRTIRYPDPLIKPNDTIKLDLEENKIVEFIKFDVGNVVMVTGG 186
Query: 190 RNLGRVGTIVSRERHPGSFDIVHVKDSTGHTFATRLNNVFIIGNGTKAYISLPRGKGVRL 369
RN GRVG I +RE+H GSF+ +H++DSTGH FATRL NV+ IG GTK ++SLP+GKG++L
Sbjct: 187 RNRGRVGVIKNREKHKGSFETIHIQDSTGHEFATRLGNVYTIGKGTKPWVSLPKGKGIKL 246
Query: 370 TIAEERDKRIAAKVA 414
TI EE KR+A++ A
Sbjct: 247 TIIEEARKRLASQQA 261
>UniRef50_UPI0000499069 Cluster: 40S ribosomal protein S4; n=2;
Entamoeba histolytica HM-1:IMSS|Rep: 40S ribosomal
protein S4 - Entamoeba histolytica HM-1:IMSS
Length = 326
Score = 163 bits (397), Expect = 1e-39
Identities = 67/125 (53%), Positives = 97/125 (77%)
Frame = +1
Query: 25 GPKSVPYLVTHDGRTLRYPDPLIKVNDSVQLDISTNKIMDFIKFDSGNLCMITGGRNLGR 204
G ++PY+VTHDGRT+RYP P ++ ND+++L++ T KI+DF+KFD GN M+ GG +GR
Sbjct: 132 GTGAIPYIVTHDGRTIRYPHPELQANDTIKLNLETGKIVDFVKFDIGNTAMMIGGNGMGR 191
Query: 205 VGTIVSRERHPGSFDIVHVKDSTGHTFATRLNNVFIIGNGTKAYISLPRGKGVRLTIAEE 384
VG IV RE HPGSF+IVH+KD+ G+TF TRLNNVF+IG GT+ ++LP KG++ + ++
Sbjct: 192 VGVIVKREVHPGSFEIVHIKDAKGNTFTTRLNNVFVIGKGTETLVNLPLDKGIKKPLLQQ 251
Query: 385 RDKRI 399
++ I
Sbjct: 252 VNETI 256
>UniRef50_UPI00006CBCC9 Cluster: Ribosomal family S4e containing
protein; n=1; Tetrahymena thermophila SB210|Rep:
Ribosomal family S4e containing protein - Tetrahymena
thermophila SB210
Length = 370
Score = 158 bits (384), Expect = 5e-38
Identities = 68/128 (53%), Positives = 93/128 (72%)
Frame = +1
Query: 19 ATGPKSVPYLVTHDGRTLRYPDPLIKVNDSVQLDISTNKIMDFIKFDSGNLCMITGGRNL 198
A GP +PY+VTHD RT+R+P+P IK+ D+++ D+ NKI +F +SGN+C I G N+
Sbjct: 242 AIGPNQIPYIVTHDSRTIRFPNPEIKIGDTLKYDLVNNKIENFAHLESGNVCYIQQGNNI 301
Query: 199 GRVGTIVSRERHPGSFDIVHVKDSTGHTFATRLNNVFIIGNGTKAYISLPRGKGVRLTIA 378
GRVG I E+H GSFDI HVKD+ G+ FATRL N+F++G G K++I LP G GVR TI
Sbjct: 302 GRVGIIQHIEKHQGSFDICHVKDAKGNAFATRLGNIFVLGQGKKSWIELPSGDGVRETIL 361
Query: 379 EERDKRIA 402
EER ++ +
Sbjct: 362 EERKRKFS 369
>UniRef50_Q9XG32 Cluster: 40S ribosomal protein S4; n=1; Guillardia
theta|Rep: 40S ribosomal protein S4 - Guillardia theta
(Cryptomonas phi)
Length = 257
Score = 142 bits (344), Expect = 4e-33
Identities = 65/127 (51%), Positives = 93/127 (73%), Gaps = 1/127 (0%)
Frame = +1
Query: 13 RVATGPKSVPYLVTHDGRTLRYPDPLIKVNDSVQLDISTNKIMDFIKFDSGNLCMITGGR 192
RV+ G K +PY+VTHDGRT+R+P+ LIK NDS+ LD+ NK++DFIKF G+LC++ G
Sbjct: 128 RVSIGSKGIPYIVTHDGRTIRFPNLLIKSNDSIVLDLLNNKVIDFIKFSIGSLCVVIKGS 187
Query: 193 NLGRVGTIVSRERHPGSFDIVHVKDSTGHTFATRLNNVFIIGNGTKAYISLPRGKGVR-L 369
N+GR+G ++ GS IV +KD G +F+T+ N+F+IG GTK++ISLPR +G+R L
Sbjct: 188 NIGRIGVFINTIGGQGSDSIVCLKDFNGSSFSTQTKNLFVIGKGTKSFISLPRFRGLRTL 247
Query: 370 TIAEERD 390
T + E D
Sbjct: 248 TKSLEHD 254
>UniRef50_A2ECC6 Cluster: 40S ribosomal protein S4-C, putative; n=4;
Trichomonas vaginalis G3|Rep: 40S ribosomal protein
S4-C, putative - Trichomonas vaginalis G3
Length = 269
Score = 131 bits (316), Expect = 9e-30
Identities = 59/119 (49%), Positives = 84/119 (70%)
Frame = +1
Query: 25 GPKSVPYLVTHDGRTLRYPDPLIKVNDSVQLDISTNKIMDFIKFDSGNLCMITGGRNLGR 204
G K +P++VTHDGRT+ Y DP ++V+D+++ +I T ++ IKF G++ M+T G N+GR
Sbjct: 146 GAKGIPHVVTHDGRTISYVDPSVRVHDALKFNIKTGEVESVIKFKVGDVAMVTAGGNVGR 205
Query: 205 VGTIVSRERHPGSFDIVHVKDSTGHTFATRLNNVFIIGNGTKAYISLPRGKGVRLTIAE 381
VGTI E+ SFDIVH+KD++G FATR+ NVF+IG ISLP +GVR +I E
Sbjct: 206 VGTIQKIEKQMASFDIVHLKDTSGAVFATRIMNVFVIGENEHPLISLPAREGVRPSILE 264
>UniRef50_UPI0000D9EB72 Cluster: PREDICTED: similar to 40S ribosomal
protein S4, X isoform; n=1; Macaca mulatta|Rep:
PREDICTED: similar to 40S ribosomal protein S4, X
isoform - Macaca mulatta
Length = 244
Score = 128 bits (308), Expect = 8e-29
Identities = 58/113 (51%), Positives = 81/113 (71%)
Frame = +1
Query: 10 RRVATGPKSVPYLVTHDGRTLRYPDPLIKVNDSVQLDISTNKIMDFIKFDSGNLCMITGG 189
R++ K +P+LV HD T+R+PD LIKVND++Q+D+ T KI +KFD+GNLC++TGG
Sbjct: 137 RKIFVRAKGIPHLVIHDIHTVRHPDSLIKVNDTIQIDLETGKITA-LKFDTGNLCLVTGG 195
Query: 190 RNLGRVGTIVSRERHPGSFDIVHVKDSTGHTFATRLNNVFIIGNGTKAYISLP 348
N GR+G I +RERHP SFD HVKD+ ++F+ +F+I G K +ISLP
Sbjct: 196 GNWGRIGVITNRERHPVSFDTFHVKDANSNSFSI----IFVIDKGNKPWISLP 244
>UniRef50_Q7KJQ3 Cluster: 40S ribosomal protein S4; n=9;
Eukaryota|Rep: 40S ribosomal protein S4 - Leishmania
major
Length = 273
Score = 122 bits (294), Expect = 4e-27
Identities = 54/132 (40%), Positives = 83/132 (62%), Gaps = 1/132 (0%)
Frame = +1
Query: 22 TGPKSVPYLVTHDGRTLRYPDPLIKVNDSVQLDISTNKIMDFIKFDSGNLCMITGGRNLG 201
T VP VTHDG +RYPDP + D++ ++ K +D IK G ++TGG N G
Sbjct: 128 TATGRVPVAVTHDGHRIRYPDPHTSIGDTIVYNVKEKKCVDLIKNRQGKAVIVTGGANRG 187
Query: 202 RVGTIVSRERHPGSFDIVHVKDSTGHTFATRLNNVFIIGNG-TKAYISLPRGKGVRLTIA 378
R+G IV E HPG+F+I H+KD++G FATR N+F+IG +++P+ +G+R+ +
Sbjct: 188 RIGEIVKVECHPGAFNIAHLKDASGAEFATRAANIFVIGKDLNNLQVTVPKQQGLRMNVI 247
Query: 379 EERDKRIAAKVA 414
+ER++R+ A A
Sbjct: 248 QEREERLIAAEA 259
>UniRef50_Q00TF1 Cluster: Chromosome 17 contig 1, DNA sequence; n=1;
Ostreococcus tauri|Rep: Chromosome 17 contig 1, DNA
sequence - Ostreococcus tauri
Length = 197
Score = 79.4 bits (187), Expect = 4e-14
Identities = 50/121 (41%), Positives = 63/121 (52%)
Frame = -3
Query: 393 LVPLLRDGEAHSLPAREGDVRLRAIADYEHVV*PGRERVPGGVLDVHDVEGAGVALARDD 214
L+ + DGE +L + D RL A D EHV R+ + GGVL VH+ EG V LA D
Sbjct: 27 LLLFVDDGELDTLALGKRDHRLVARTDGEHVRRARRKLLTGGVLQVHNFEGTDVLLAALD 86
Query: 213 GADATQIPAAGDHAEVAGVELDEVHDLVGGDVELHRVVHLDXXXXXXXXXXXXRHQVRHA 34
DAT + GDHA+ A VELD + DLV DV+ + V LD + RHA
Sbjct: 87 HPDATGVVTTGDHAQSADVELDRIGDLVRRDVDHNGVTLLDHGIRVTNGAAVVQTDARHA 146
Query: 33 L 31
L
Sbjct: 147 L 147
>UniRef50_Q9YF85 Cluster: 30S ribosomal protein S4e; n=4;
Desulfurococcales|Rep: 30S ribosomal protein S4e -
Aeropyrum pernix
Length = 253
Score = 62.1 bits (144), Expect = 6e-09
Identities = 39/109 (35%), Positives = 62/109 (56%), Gaps = 9/109 (8%)
Frame = +1
Query: 55 HDGRTL--RYPDP------LIKVNDSVQLDISTNKIMDFIKFDSGNLCMITGGRNLGRVG 210
HDGR + R DP + + D++ + + +I IKF G + +I GGRN+GRVG
Sbjct: 143 HDGRNILVRVKDPRNPVEDVYRTMDTLLITVPGQEIKGHIKFGEGAIAIIVGGRNVGRVG 202
Query: 211 TIVSRERHPG-SFDIVHVKDSTGHTFATRLNNVFIIGNGTKAYISLPRG 354
+ S ++ G +V ++D++G+ F T L+ VF+IG + ISLP G
Sbjct: 203 VVKSVQKGWGRKRTLVTLEDASGNLFQTSLDYVFVIGL-DRPVISLPEG 250
>UniRef50_Q8SRB9 Cluster: 40S RIBOSOMAL PROTEIN S4; n=1;
Encephalitozoon cuniculi|Rep: 40S RIBOSOMAL PROTEIN S4 -
Encephalitozoon cuniculi
Length = 268
Score = 60.1 bits (139), Expect = 3e-08
Identities = 29/128 (22%), Positives = 72/128 (56%), Gaps = 1/128 (0%)
Frame = +1
Query: 31 KSVPYLVTHDGRTLRYPDPLIKVNDSVQLDISTNKIMDFIKFDSGNLCMITGGRNLGRVG 210
+ +PY+V+ G ++R+ DP I + ++++ T+K++++I + ++ G+ GRVG
Sbjct: 133 QGIPYIVSSCGLSIRFCDPAIDLGYTIKISNETSKVIEYIVPGPDKVIFVSRGKARGRVG 192
Query: 211 TIVSRERHPGSFDIVHVKDSTGHTFATRLNNVFIIGNGTK-AYISLPRGKGVRLTIAEER 387
+++ G + + D G+TF+ + +IG ++ +I+LP+ +G+R + E+
Sbjct: 193 -VINTISTQGKETVYGMTDFAGNTFSCTSKSCILIGESSENIWITLPKERGIRQSELEKI 251
Query: 388 DKRIAAKV 411
+ ++ +
Sbjct: 252 NAQLGEMI 259
>UniRef50_Q56230 Cluster: 30S ribosomal protein S4e; n=3;
Thermoplasma|Rep: 30S ribosomal protein S4e -
Thermoplasma acidophilum
Length = 235
Score = 56.0 bits (129), Expect = 4e-07
Identities = 35/102 (34%), Positives = 53/102 (51%), Gaps = 1/102 (0%)
Frame = +1
Query: 46 LVTHDGRTLRYPDPLIKVNDSVQLDISTNKIMDFIKFDSGNLCMITGGRNLGRVGTIVSR 225
L THDGRT D KV D + + KI + IK GN IT G ++ + GTI
Sbjct: 133 LGTHDGRTFITDDKSKKVGDVWAVSVPDMKISEIIKMQPGNKAYITAGSHVNQTGTISKI 192
Query: 226 ERHPG-SFDIVHVKDSTGHTFATRLNNVFIIGNGTKAYISLP 348
E G S ++VH ++ F+T ++VF+IG+ +++ P
Sbjct: 193 EAKEGSSANLVHFQEG----FSTIKDHVFMIGSSKFSFVLSP 230
>UniRef50_Q40941 Cluster: 40S ribosomal protein S4; n=2;
Bigelowiella natans|Rep: 40S ribosomal protein S4 -
Bigelowiella natans (Pedinomonas minutissima)
(Chlorarachnion sp.(strain CCMP 621))
Length = 242
Score = 55.2 bits (127), Expect = 7e-07
Identities = 27/100 (27%), Positives = 54/100 (54%)
Frame = +1
Query: 46 LVTHDGRTLRYPDPLIKVNDSVQLDISTNKIMDFIKFDSGNLCMITGGRNLGRVGTIVSR 225
++T D R L+ IKV DS+ + ++I+ +KF+ G+LC+IT G++LG + I
Sbjct: 139 IITDDLRELKINYAKIKVEDSLLIKTINDEIVYALKFEVGSLCLITRGKHLGTIAVIKEI 198
Query: 226 ERHPGSFDIVHVKDSTGHTFATRLNNVFIIGNGTKAYISL 345
+ ++H++ G + +++ +IG + +SL
Sbjct: 199 RKTKSLRKMIHLEKIDGKKLTKKCSDLLVIGESKTSILSL 238
>UniRef50_Q6L1B5 Cluster: 30S ribosomal protein S4e; n=1;
Picrophilus torridus|Rep: 30S ribosomal protein S4e -
Picrophilus torridus
Length = 234
Score = 53.2 bits (122), Expect = 3e-06
Identities = 35/99 (35%), Positives = 54/99 (54%), Gaps = 1/99 (1%)
Frame = +1
Query: 55 HDGRTLRYPDPLIKVNDSVQLDISTNKIMDFIKFDSGNLCMITGGRNLGRVGTIVSRE-R 231
HDG T+ IK DSV + I +I+D +KF GN ITGG ++G + TI S E +
Sbjct: 136 HDGSTMVTDRKDIKNGDSVLVKIPKKEIVDVLKFAPGNRVFITGGSHVGEIATIKSIEIK 195
Query: 232 HPGSFDIVHVKDSTGHTFATRLNNVFIIGNGTKAYISLP 348
++VH+ + F+T + VF++G+ K S+P
Sbjct: 196 SSSGENMVHMNEG----FSTVSSYVFVMGS-PKYTFSMP 229
>UniRef50_P62428 Cluster: 30S ribosomal protein S4e; n=12;
Euryarchaeota|Rep: 30S ribosomal protein S4e -
Methanococcus maripaludis
Length = 244
Score = 49.2 bits (112), Expect = 5e-05
Identities = 27/79 (34%), Positives = 38/79 (48%)
Frame = +1
Query: 82 DPLIKVNDSVQLDISTNKIMDFIKFDSGNLCMITGGRNLGRVGTIVSRERHPGSFDIVHV 261
+ + K DSV + I I + F G L ITGG+++G IV E DIV +
Sbjct: 158 EDVYKTGDSVLISIPEQSIAGHVAFGEGKLAYITGGKHVGEFAKIVEVENRALYSDIVTL 217
Query: 262 KDSTGHTFATRLNNVFIIG 318
++ G F T VFI+G
Sbjct: 218 ENKDGEKFKTVKPYVFIVG 236
>UniRef50_A5BV74 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 186
Score = 47.2 bits (107), Expect = 2e-04
Identities = 26/91 (28%), Positives = 45/91 (49%)
Frame = -3
Query: 408 LRCDALVPLLRDGEAHSLPAREGDVRLRAIADYEHVV*PGRERVPGGVLDVHDVEGAGVA 229
L C L+ L D + L R+ RL +A+ EH+ + +P G+L+V ++G V
Sbjct: 88 LGCKPLLGLFDDRQLDXLTLRKRYPRLCPLANDEHIAQTSCKFMPSGILNVDGLKGPLVL 147
Query: 228 LARDDGADATQIPAAGDHAEVAGVELDEVHD 136
L D ++ +P+ H + ++ DEV D
Sbjct: 148 LPVLDDSNTAPVPSTSHHDNIPNIKFDEVXD 178
>UniRef50_A3CT09 Cluster: Ribosomal protein S4E, central; n=3;
Methanomicrobiales|Rep: Ribosomal protein S4E, central -
Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498
/ JR1)
Length = 242
Score = 46.4 bits (105), Expect = 3e-04
Identities = 30/91 (32%), Positives = 44/91 (48%), Gaps = 7/91 (7%)
Frame = +1
Query: 82 DPLIKVNDSVQLDISTN-----KIMDFIKFDSGNLCMITGGRNLGRVGTIVSRERHPGSF 246
D K DSV + + T+ +I+D + GN+ MI GG++ G+VG IV R S
Sbjct: 145 DNTYKAKDSVVVTLGTDGEDRFRIVDHFPYAEGNVAMIVGGKHSGKVGRIVEIIRTASSV 204
Query: 247 --DIVHVKDSTGHTFATRLNNVFIIGNGTKA 333
++ DS G F T VF++G A
Sbjct: 205 PNHVILTDDSAGERFETIEEYVFMVGRSAIA 235
>UniRef50_Q6Y3G3 Cluster: RecA; n=2; Desulfuromonadales|Rep: RecA -
Geobacter chapelleii
Length = 171
Score = 44.0 bits (99), Expect = 0.002
Identities = 25/65 (38%), Positives = 36/65 (55%), Gaps = 2/65 (3%)
Frame = +3
Query: 9 AARRDRPQERAVP-GDARRAHAPVPGPAHQG-ERLGAARHLHQQDHGLHQVRLRQPLHDH 182
A R+R ++ +P G A H P P AH+ +++ RHLHQ D + +RQP +DH
Sbjct: 27 APGRNRGRDGRLPHGTAGPPHVPSPAQAHRHHQQIQLLRHLHQPDPHEDRRHVRQPRNDH 86
Query: 183 RRQES 197
RQ S
Sbjct: 87 GRQRS 91
>UniRef50_A5UL76 Cluster: Ribosomal protein S4e; n=2;
Methanobacteriaceae|Rep: Ribosomal protein S4e -
Methanobrevibacter smithii (strain PS / ATCC 35061 / DSM
861)
Length = 242
Score = 41.9 bits (94), Expect = 0.007
Identities = 27/101 (26%), Positives = 50/101 (49%), Gaps = 4/101 (3%)
Frame = +1
Query: 55 HDGRTLRYPDPLIKVNDSVQLDISTNKIMDFIKFDSGNLCMITGGRNLGRVGT----IVS 222
HDG+ + + V D + L + ++I + + G +ITGG++ G +GT IV+
Sbjct: 141 HDGKNVIIDENDYNVGDVIDLKVPDHEINEVFELKEGACVLITGGKHTGELGTVSEIIVN 200
Query: 223 RERHPGSFDIVHVKDSTGHTFATRLNNVFIIGNGTKAYISL 345
+P + + +++S F T + F++G A ISL
Sbjct: 201 ESSNPNT---IIIENSAKDEFLTLKDYAFVVGEDAPA-ISL 237
>UniRef50_Q12ZT9 Cluster: Ribosomal protein S4E; n=1;
Methanococcoides burtonii DSM 6242|Rep: Ribosomal
protein S4E - Methanococcoides burtonii (strain DSM
6242)
Length = 236
Score = 40.7 bits (91), Expect = 0.017
Identities = 17/38 (44%), Positives = 25/38 (65%)
Frame = +1
Query: 103 DSVQLDISTNKIMDFIKFDSGNLCMITGGRNLGRVGTI 216
DS+ L + K++ IK++ GNL MI GG + G VG+I
Sbjct: 152 DSIILSVPDKKVVKHIKYEVGNLAMIVGGSHAGEVGSI 189
>UniRef50_Q8PV38 Cluster: 30S ribosomal protein S4e; n=4;
Euryarchaeota|Rep: 30S ribosomal protein S4e -
Methanosarcina mazei (Methanosarcina frisia)
Length = 235
Score = 38.7 bits (86), Expect = 0.067
Identities = 24/73 (32%), Positives = 37/73 (50%), Gaps = 1/73 (1%)
Frame = +1
Query: 103 DSVQLDISTNKIMDFIKFDSGNLCMITGGRNLGRVGTIVS-RERHPGSFDIVHVKDSTGH 279
DS+ L I ++ +KF+ GNL M+ GG++ G G I+ RE + V + T
Sbjct: 151 DSLILSIPDKHVVKHLKFEVGNLAMVIGGQHSGETGKIMEIREVKSSRHNTVMISGET-- 208
Query: 280 TFATRLNNVFIIG 318
F T + V +IG
Sbjct: 209 DFETIEDYVIVIG 221
>UniRef50_A0RVY5 Cluster: Ribosomal protein S4E; n=2;
Thermoprotei|Rep: Ribosomal protein S4E - Cenarchaeum
symbiosum
Length = 238
Score = 38.3 bits (85), Expect = 0.088
Identities = 19/54 (35%), Positives = 28/54 (51%)
Frame = +1
Query: 55 HDGRTLRYPDPLIKVNDSVQLDISTNKIMDFIKFDSGNLCMITGGRNLGRVGTI 216
HDGR+L D + V DS + + KI+ + + G ++T G N G GTI
Sbjct: 143 HDGRSL-ISDEKVSVGDSCLVQVPGQKILKVARMEKGAHAVVTRGTNAGSTGTI 195
>UniRef50_UPI000038E22A Cluster: hypothetical protein Faci_03001139;
n=1; Ferroplasma acidarmanus fer1|Rep: hypothetical
protein Faci_03001139 - Ferroplasma acidarmanus fer1
Length = 241
Score = 37.9 bits (84), Expect = 0.12
Identities = 25/89 (28%), Positives = 47/89 (52%), Gaps = 1/89 (1%)
Frame = +1
Query: 55 HDGRTLRYPDPLIKVNDSVQLDISTNKIMDFIKFDSGNLCMITGGRNLGRVGTIVSRERH 234
HDG+T+ I +D + + I +I + +K G+ ITGG ++G + TI S E
Sbjct: 139 HDGKTIVTDRKDINTSDVLLMKIPDLEIENVLKIAEGDKVFITGGSHVGELATIKSIEVK 198
Query: 235 PGSF-DIVHVKDSTGHTFATRLNNVFIIG 318
S ++V++ + F+T + +F++G
Sbjct: 199 KSSVKNMVYLNEG----FSTIKDYMFVVG 223
>UniRef50_A0TIU6 Cluster: Putative uncharacterized protein; n=1;
Burkholderia ambifaria MC40-6|Rep: Putative
uncharacterized protein - Burkholderia ambifaria MC40-6
Length = 402
Score = 37.9 bits (84), Expect = 0.12
Identities = 29/71 (40%), Positives = 35/71 (49%), Gaps = 5/71 (7%)
Frame = +3
Query: 3 TRAAR-RDRPQERAVPGDARRAHAP----VPGPAHQGERLGAARHLHQQDHGLHQVRLRQ 167
TRA RDR ++ V G+ RR HA V GER G+ R L Q +H + R RQ
Sbjct: 45 TRAQMARDRERDWRVRGEQRRTHAASRRVVKARVEVGERRGSRRRLVQIEH--DRRRHRQ 102
Query: 168 PLHDHRRQESG 200
P RR E G
Sbjct: 103 PARAERRAERG 113
>UniRef50_Q0W1X6 Cluster: 30S ribosomal protein S4E; n=2;
Euryarchaeota|Rep: 30S ribosomal protein S4E -
Uncultured methanogenic archaeon RC-I
Length = 234
Score = 36.3 bits (80), Expect = 0.36
Identities = 27/93 (29%), Positives = 41/93 (44%)
Frame = +1
Query: 55 HDGRTLRYPDPLIKVNDSVQLDISTNKIMDFIKFDSGNLCMITGGRNLGRVGTIVSRERH 234
HDG T+ + K DSV L + KI + G+L M+T G++ G +G + +
Sbjct: 137 HDGTTMIASNDY-KTKDSVILKMPERKIDQHFTYAVGSLVMVTEGKHSGEIGKVKEIKVV 195
Query: 235 PGSFDIVHVKDSTGHTFATRLNNVFIIGNGTKA 333
S V + F T VF+IG + A
Sbjct: 196 RSSAPNTVVITTPEGDFETIEQYVFVIGKDSPA 228
>UniRef50_Q8XT76 Cluster: 1,4-alpha-glucan-branching enzyme; n=128;
cellular organisms|Rep: 1,4-alpha-glucan-branching
enzyme - Ralstonia solanacearum (Pseudomonas
solanacearum)
Length = 775
Score = 36.3 bits (80), Expect = 0.36
Identities = 20/53 (37%), Positives = 28/53 (52%)
Frame = -3
Query: 393 LVPLLRDGEAHSLPAREGDVRLRAIADYEHVV*PGRERVPGGVLDVHDVEGAG 235
+ P+ RDG +P +G VR R + + + V G GGV+DV DVE G
Sbjct: 704 MTPVPRDGYRIGVPDVDGAVRWREMLNTDSAVYGGTNLGNGGVVDVEDVESHG 756
>UniRef50_Q3WHX0 Cluster: Putative uncharacterized protein; n=1;
Frankia sp. EAN1pec|Rep: Putative uncharacterized
protein - Frankia sp. EAN1pec
Length = 643
Score = 35.1 bits (77), Expect = 0.82
Identities = 22/57 (38%), Positives = 25/57 (43%), Gaps = 4/57 (7%)
Frame = +3
Query: 12 ARRDRPQERAVPGDARRAH----APVPGPAHQGERLGAARHLHQQDHGLHQVRLRQP 170
ARR R R +P RRAH PVPG H+ R R H HQ R +P
Sbjct: 157 ARRGRADRRRLPHRPRRAHRARTRPVPGRGHRRVRRRPRRRRHPHPRYRHQRRRLRP 213
Score = 33.1 bits (72), Expect = 3.3
Identities = 19/54 (35%), Positives = 24/54 (44%)
Frame = +3
Query: 27 PQERAVPGDARRAHAPVPGPAHQGERLGAARHLHQQDHGLHQVRLRQPLHDHRR 188
P+ R P R H PV P+H+ + RH + HQ R R P H RR
Sbjct: 298 PRIRVHPPGRLRPHPPVRHPSHR-HQPPPGRHRGHRQRRRHQPRPRSPRHRQRR 350
>UniRef50_A3H986 Cluster: Ribosomal protein S4E; n=1; Caldivirga
maquilingensis IC-167|Rep: Ribosomal protein S4E -
Caldivirga maquilingensis IC-167
Length = 237
Score = 35.1 bits (77), Expect = 0.82
Identities = 19/71 (26%), Positives = 33/71 (46%)
Frame = +1
Query: 106 SVQLDISTNKIMDFIKFDSGNLCMITGGRNLGRVGTIVSRERHPGSFDIVHVKDSTGHTF 285
SV +++ K+MD+ + G N+GR GT+++ R D + + F
Sbjct: 157 SVVVNLEDGKLMDYYPMQPNQYVIAFNGVNVGRHGTLINWVRSFRKRDAIATVKAKDSEF 216
Query: 286 ATRLNNVFIIG 318
T LN + +IG
Sbjct: 217 RTVLNYLLVIG 227
>UniRef50_Q4RIW1 Cluster: Chromosome undetermined SCAF15041, whole
genome shotgun sequence; n=1; Tetraodon
nigroviridis|Rep: Chromosome undetermined SCAF15041,
whole genome shotgun sequence - Tetraodon nigroviridis
(Green puffer)
Length = 459
Score = 34.7 bits (76), Expect = 1.1
Identities = 36/126 (28%), Positives = 44/126 (34%), Gaps = 6/126 (4%)
Frame = +3
Query: 57 RRAHAPVPGPAHQGERLGAARHLHQQDHGLHQVRLRQPLHDHRRQESGSXXXXXXXXXXX 236
R A PGP Q +R G +H QD G+ Q R DHRR + +
Sbjct: 191 RPPRASGPGPVGQVQRAG--HQVHHQDRGIRQAGSRLHRADHRRPDHAAEGRLPGHSDPA 248
Query: 237 XXXXXXXXQGLH----RAHVR-DQVKQRVHNRQWHEGVHL-PPAREGSAPHHRGGAGQAH 398
G H RA + D QR G+HL PA H G Q H
Sbjct: 249 HLYPVHPRPGHHDLLRRADPQPDPDAQRRLRAPHRPGLHLRQPAAAHRDGRHGDGPPQRH 308
Query: 399 RSEGRR 416
+ RR
Sbjct: 309 LPDLRR 314
>UniRef50_Q2S3S1 Cluster: Tetratricopeptide repeat family; n=1;
Salinibacter ruber DSM 13855|Rep: Tetratricopeptide
repeat family - Salinibacter ruber (strain DSM 13855)
Length = 990
Score = 34.7 bits (76), Expect = 1.1
Identities = 19/36 (52%), Positives = 26/36 (72%), Gaps = 3/36 (8%)
Frame = +2
Query: 323 ARRR---TSPSRAGRECASPSRRSGTSASQRRSPDS 421
ARRR T+PS++GRE A+PS+R +SA+ RS S
Sbjct: 944 ARRRPAPTTPSQSGRERATPSQRRDSSATPTRSASS 979
>UniRef50_A1WVF4 Cluster: CBS domain containing protein precursor;
n=4; Gammaproteobacteria|Rep: CBS domain containing
protein precursor - Halorhodospira halophila (strain DSM
244 / SL1) (Ectothiorhodospirahalophila (strain DSM 244
/ SL1))
Length = 291
Score = 34.3 bits (75), Expect = 1.4
Identities = 31/97 (31%), Positives = 45/97 (46%), Gaps = 3/97 (3%)
Frame = -3
Query: 405 RCDALVPLLRDGEAHSLPAREGDVRLRAIADYEHVV*PGRERVPGGVLDVHDVEGAGVAL 226
R DAL+ R+ H + L I E V+ E++ G + D HD + L
Sbjct: 151 RLDALLKQFRESRNHMSVVVDEYGGLAGIVTIEDVI----EQIVGEIDDEHDFDEDAPIL 206
Query: 225 ARDDGA---DATQIPAAGDHAEVAGVELDEVHDLVGG 124
ARDDG+ A A + A AG++ D++ D VGG
Sbjct: 207 ARDDGSWIVKAVTPIEAFNEALSAGLKEDDL-DTVGG 242
>UniRef50_A3BE82 Cluster: Putative uncharacterized protein; n=1;
Oryza sativa (japonica cultivar-group)|Rep: Putative
uncharacterized protein - Oryza sativa subsp. japonica
(Rice)
Length = 247
Score = 34.3 bits (75), Expect = 1.4
Identities = 24/70 (34%), Positives = 31/70 (44%), Gaps = 4/70 (5%)
Frame = +3
Query: 3 TRAAR--RDRPQERAVPGDARRAHAPVPGPAHQGERLGAARHLHQQDHGLHQVRLRQPLH 176
+R AR R R RA G+A R H PVP + RH H G ++RLR+
Sbjct: 105 SRRARLLRRREDRRAAAGEAHRVHHPVPDHRERAPPHRVPRH-HPDGQGRRRLRLRRARR 163
Query: 177 --DHRRQESG 200
+ QE G
Sbjct: 164 AGERHAQEGG 173
>UniRef50_Q673R6 Cluster: Ribosomal protein S4; n=2; environmental
samples|Rep: Ribosomal protein S4 - uncultured marine
group II euryarchaeote DeepAnt-JyKC7
Length = 232
Score = 34.3 bits (75), Expect = 1.4
Identities = 29/106 (27%), Positives = 46/106 (43%), Gaps = 2/106 (1%)
Frame = +1
Query: 7 GRRVATGPKSVPYLVTHDGRTLRYPDP-LIKVNDSVQLDISTNKIMDFIKFDSGNLCMIT 183
G+ T K+ +L HDGR + D L D++ + + + F G +T
Sbjct: 123 GKSTITDGKTQIHL--HDGRNILVSDAKLYDSGDTLVISLPDQSVAGHHPFSKGATAYLT 180
Query: 184 GGRNLGRVGTIVSRE-RHPGSFDIVHVKDSTGHTFATRLNNVFIIG 318
GG ++G +VSR+ + + V D F T + VFIIG
Sbjct: 181 GGSHIGITAKVVSRDIKRSSKPNEVQFPD-----FGTVADYVFIIG 221
>UniRef50_UPI0000383638 Cluster: COG2931: RTX toxins and related
Ca2+-binding proteins; n=6; Magnetospirillum
magnetotacticum MS-1|Rep: COG2931: RTX toxins and
related Ca2+-binding proteins - Magnetospirillum
magnetotacticum MS-1
Length = 732
Score = 33.5 bits (73), Expect = 2.5
Identities = 31/92 (33%), Positives = 41/92 (44%), Gaps = 5/92 (5%)
Frame = -3
Query: 372 GEAHSLPAREGD-VRLRAIADYEHVV*PGRERVPGGVLDVH-DVEGAGVALARDD---GA 208
GEA + A EGD V L V GR+ V G + D +G + D G
Sbjct: 386 GEADEIRAGEGDNVVLGGAGGDSLVTGSGRDTVLGDHGQIRFDAKGLIARVESLDTGLGG 445
Query: 207 DATQIPAAGDHAEVAGVELDEVHDLVGGDVEL 112
D T AGD+ +AG+ D+V L G D+ L
Sbjct: 446 DDTVEAGAGDNLVIAGIGADKVTALGGSDIVL 477
>UniRef50_UPI0000ECB83B Cluster: Uncharacterized protein C21orf70.;
n=3; Gallus gallus|Rep: Uncharacterized protein
C21orf70. - Gallus gallus
Length = 144
Score = 33.5 bits (73), Expect = 2.5
Identities = 15/31 (48%), Positives = 16/31 (51%)
Frame = -2
Query: 418 VRRPSLRCACPAPPRW*GALPSRAGGRCTPS 326
VRRP L CA P PP P GGR P+
Sbjct: 5 VRRPRLHCAAPRPPPRPNPAPPGPGGRSAPA 35
>UniRef50_Q3JN86 Cluster: Putative uncharacterized protein; n=2;
Burkholderia|Rep: Putative uncharacterized protein -
Burkholderia pseudomallei (strain 1710b)
Length = 769
Score = 33.5 bits (73), Expect = 2.5
Identities = 39/138 (28%), Positives = 52/138 (37%), Gaps = 3/138 (2%)
Frame = +3
Query: 15 RRDRPQERAVPGDARRAHAPVPG---PAHQGERLGAARHLHQQDHGLHQVRLRQPLHDHR 185
RRDR + R G H P G PAHQ +R G ARH H + R R P
Sbjct: 603 RRDR-RSRDQSGRFADRHVPRVGRGRPAHQQDRFGGARHAHPDGN-----RRRVPGRPLA 656
Query: 186 RQESGSXXXXXXXXXXXXXXXXXXXQGLHRAHVRDQVKQRVHNRQWHEGVHLPPAREGSA 365
QE GS +G A D++ + + + V LP + +
Sbjct: 657 AQEQGSRAEGARRADQGQAVSRAAREGGSHAQEPDRLGRPL---RADPHVQLPAGPDDRS 713
Query: 366 PHHRGGAGQAHRSEGRRT 419
P + A QA GRR+
Sbjct: 714 P-DQPDAVQARTDHGRRS 730
>UniRef50_Q6Y3D2 Cluster: NifD; n=1; Desulfuromonas
chloroethenica|Rep: NifD - Desulfuromonas chloroethenica
Length = 152
Score = 33.5 bits (73), Expect = 2.5
Identities = 26/69 (37%), Positives = 29/69 (42%), Gaps = 9/69 (13%)
Frame = +3
Query: 12 ARRDRPQERAVPGDARRAHAPVPGPAHQGERLGAARHLHQQDHGL--------HQVRLRQ 167
AR RP R PG++R H V G R A Q H L H RLR
Sbjct: 16 ARHCRPLRRDHPGESRGGHRQVHAGDAGGHRRVQAAPRRQDRHALRRRPAPPPHHRRLRG 75
Query: 168 PLH-DHRRQ 191
P H DHRR+
Sbjct: 76 PRHPDHRRR 84
>UniRef50_A6GI42 Cluster: Serine/threonine protein kinase; n=1;
Plesiocystis pacifica SIR-1|Rep: Serine/threonine
protein kinase - Plesiocystis pacifica SIR-1
Length = 838
Score = 33.5 bits (73), Expect = 2.5
Identities = 24/55 (43%), Positives = 25/55 (45%), Gaps = 1/55 (1%)
Frame = +3
Query: 6 RAARRDRPQERAVPG-DARRAHAPVPGPAHQGERLGAARHLHQQDHGLHQVRLRQ 167
RA R P RA PG DA R AP GP Q +R A R HG RL Q
Sbjct: 775 RARRTHAPPHRAEPGQDAARPRAP--GPGRQDQRRQAPRGRRHALHGHAPGRLAQ 827
>UniRef50_Q6P3E2 Cluster: Immediate early response 5-like; n=2;
Eutheria|Rep: Immediate early response 5-like - Homo
sapiens (Human)
Length = 237
Score = 33.5 bits (73), Expect = 2.5
Identities = 15/28 (53%), Positives = 18/28 (64%)
Frame = +3
Query: 102 RLGAARHLHQQDHGLHQVRLRQPLHDHR 185
R AARH Q H LHQ+ L+Q LH H+
Sbjct: 103 RESAARHQLHQLHQLHQLHLQQQLHQHQ 130
>UniRef50_Q3W8J3 Cluster: Putative oxidoreductase; n=1; Frankia sp.
EAN1pec|Rep: Putative oxidoreductase - Frankia sp.
EAN1pec
Length = 578
Score = 28.7 bits (61), Expect(2) = 2.9
Identities = 15/37 (40%), Positives = 21/37 (56%)
Frame = +3
Query: 90 HQGERLGAARHLHQQDHGLHQVRLRQPLHDHRRQESG 200
H G+R GA R ++ HGL + R +PL HR +G
Sbjct: 434 HGGDRHGARRRAPRR-HGLGRRRRHRPLPRHRPHRAG 469
Score = 23.4 bits (48), Expect(2) = 2.9
Identities = 12/26 (46%), Positives = 13/26 (50%)
Frame = +3
Query: 6 RAARRDRPQERAVPGDARRAHAPVPG 83
R A R R + R ARR PVPG
Sbjct: 373 RRAERARGERRPGAARARRVLQPVPG 398
>UniRef50_UPI00006C16E3 Cluster: PREDICTED: hypothetical protein;
n=2; Homo sapiens|Rep: PREDICTED: hypothetical protein -
Homo sapiens
Length = 310
Score = 33.1 bits (72), Expect = 3.3
Identities = 20/53 (37%), Positives = 24/53 (45%)
Frame = +3
Query: 261 QGLHRAHVRDQVKQRVHNRQWHEGVHLPPAREGSAPHHRGGAGQAHRSEGRRT 419
QG H A RD +Q H + + H P G H RG A H EGR+T
Sbjct: 188 QGTHTA--RDG-RQETHTLEGQQRGHTPARDGGQDTHPRGTADSKHTREGRQT 237
>UniRef50_UPI000059FCA3 Cluster: PREDICTED: similar to chromosome 9
open reading frame 36; n=3; Laurasiatheria|Rep:
PREDICTED: similar to chromosome 9 open reading frame 36
- Canis familiaris
Length = 1268
Score = 33.1 bits (72), Expect = 3.3
Identities = 21/67 (31%), Positives = 32/67 (47%), Gaps = 4/67 (5%)
Frame = -1
Query: 302 LFNLVANVCPVE----SLTCTMSKEPGWRSRETMVPTRPRFLPPVIMQRLPESNLMKSMI 135
LFN ++N CPV+ SL + + T P+F PP + Q L + +L S+
Sbjct: 354 LFNGISNTCPVQMQAKSLLSQSKPLSQLEFQSQPLSTTPQFQPPPLAQILTQEHLQSSLP 413
Query: 134 LLVEMSS 114
+L SS
Sbjct: 414 ILSPSSS 420
>UniRef50_Q8FTQ3 Cluster: Putative uncharacterized protein; n=1;
Corynebacterium efficiens|Rep: Putative uncharacterized
protein - Corynebacterium efficiens
Length = 722
Score = 33.1 bits (72), Expect = 3.3
Identities = 19/50 (38%), Positives = 25/50 (50%)
Frame = +3
Query: 36 RAVPGDARRAHAPVPGPAHQGERLGAARHLHQQDHGLHQVRLRQPLHDHR 185
RAV DA + H G AH + G A H++ G+ V LR P+ HR
Sbjct: 143 RAVVADAHQ-HRGHQGQAHHCDEAGDALVFHRRGGGIEPVGLRWPICQHR 191
>UniRef50_Q4IVL7 Cluster: Putative uncharacterized protein
precursor; n=1; Azotobacter vinelandii AvOP|Rep:
Putative uncharacterized protein precursor - Azotobacter
vinelandii AvOP
Length = 1343
Score = 33.1 bits (72), Expect = 3.3
Identities = 17/36 (47%), Positives = 18/36 (50%)
Frame = +2
Query: 320 MARRRTSPSRAGRECASPSRRSGTSASQRRSPDSSA 427
+ARRRT R G P GT SQRR P S A
Sbjct: 741 LARRRTGQDRPGGRGRGPDPPPGTRRSQRRGPGSPA 776
>UniRef50_A5NNX2 Cluster: Putative uncharacterized protein; n=1;
Methylobacterium sp. 4-46|Rep: Putative uncharacterized
protein - Methylobacterium sp. 4-46
Length = 105
Score = 33.1 bits (72), Expect = 3.3
Identities = 14/23 (60%), Positives = 15/23 (65%)
Frame = +3
Query: 15 RRDRPQERAVPGDARRAHAPVPG 83
RRDRPQER P RRA P+ G
Sbjct: 73 RRDRPQERLAPRSLRRAERPLTG 95
>UniRef50_A7SCV5 Cluster: Predicted protein; n=2; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 326
Score = 33.1 bits (72), Expect = 3.3
Identities = 20/56 (35%), Positives = 25/56 (44%), Gaps = 1/56 (1%)
Frame = -2
Query: 463 CCFSIYIN*RISSATVRRPSLRCA-CPAPPRW*GALPSRAGGRCTPSCHCRL*TRC 299
CCF+ N I T RP R A CPAP + + R G +C CR +C
Sbjct: 144 CCFNGCQNDCIQPVTDVRPDNRSADCPAPWKGLDGICDRMGDQCQSDIECRPNQQC 199
>UniRef50_UPI0000D5573E Cluster: PREDICTED: similar to
Tyrosine-protein phosphatase non-receptor type 13
(Protein-tyrosine phosphatase 1E) (PTP-E1) (hPTPE1)
(PTP-BAS) (Protein-tyrosine phosphatase PTPL1)
(Fas-associated protein-tyrosine phosphatase 1) (FAP-1);
n=1; Tribolium castaneum|Rep: PREDICTED: similar to
Tyrosine-protein phosphatase non-receptor type 13
(Protein-tyrosine phosphatase 1E) (PTP-E1) (hPTPE1)
(PTP-BAS) (Protein-tyrosine phosphatase PTPL1)
(Fas-associated protein-tyrosine phosphatase 1) (FAP-1)
- Tribolium castaneum
Length = 768
Score = 32.7 bits (71), Expect = 4.4
Identities = 16/45 (35%), Positives = 27/45 (60%)
Frame = +1
Query: 46 LVTHDGRTLRYPDPLIKVNDSVQLDISTNKIMDFIKFDSGNLCMI 180
+ DGR L+ D +IKVND +ST +I+D ++ G +C++
Sbjct: 708 VAARDGR-LKPGDRVIKVNDESVEHLSTTEIIDLLRIVRGPVCIV 751
>UniRef50_UPI000023E164 Cluster: hypothetical protein FG03308.1;
n=1; Gibberella zeae PH-1|Rep: hypothetical protein
FG03308.1 - Gibberella zeae PH-1
Length = 295
Score = 32.7 bits (71), Expect = 4.4
Identities = 18/44 (40%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
Frame = +3
Query: 24 RPQERAVPGDARRAHAPVPGPAH-QGERLGAARHLHQQDHGLHQ 152
RPQ++A G R AHA PGP R +H+ Q H HQ
Sbjct: 69 RPQQQAKSGGPRLAHATKPGPPKGHTSRPQHVQHVQQIQHVHHQ 112
>UniRef50_Q4RIY1 Cluster: Chromosome undetermined SCAF15041, whole
genome shotgun sequence; n=1; Tetraodon
nigroviridis|Rep: Chromosome undetermined SCAF15041,
whole genome shotgun sequence - Tetraodon nigroviridis
(Green puffer)
Length = 476
Score = 32.7 bits (71), Expect = 4.4
Identities = 19/43 (44%), Positives = 24/43 (55%), Gaps = 2/43 (4%)
Frame = +3
Query: 81 GPAHQGERLGA-ARHLH-QQDHGLHQVRLRQPLHDHRRQESGS 203
GP G+ GA A HL Q HG HQ R + LH +R+E G+
Sbjct: 160 GPDAPGQHHGAQALHLQGAQQHGGHQPRAGEGLHQGQRREGGA 202
>UniRef50_A5NUY4 Cluster: Phosphoribosylformylglycinamidine
synthase; n=1; Methylobacterium sp. 4-46|Rep:
Phosphoribosylformylglycinamidine synthase -
Methylobacterium sp. 4-46
Length = 819
Score = 32.7 bits (71), Expect = 4.4
Identities = 20/47 (42%), Positives = 24/47 (51%), Gaps = 3/47 (6%)
Frame = +3
Query: 36 RAVPGDARRAHAPVPG---PAHQGERLGAARHLHQQDHGLHQVRLRQ 167
R PGDARR+ A G P + LGA R LH + HG R R+
Sbjct: 451 RPGPGDARRSPAEADGLARPRLEALGLGAVRPLHPRQHGPEAGRRRR 497
>UniRef50_A0VDJ9 Cluster: PE-PGRS family protein; n=1; Delftia
acidovorans SPH-1|Rep: PE-PGRS family protein - Delftia
acidovorans SPH-1
Length = 201
Score = 32.7 bits (71), Expect = 4.4
Identities = 22/41 (53%), Positives = 25/41 (60%)
Frame = +3
Query: 12 ARRDRPQERAVPGDARRAHAPVPGPAHQGERLGAARHLHQQ 134
A+R R Q RA P AR P PGP H+G R GAA LH+Q
Sbjct: 45 AQRARRQ-RAHPPPARAG--PGPGPGHRG-RAGAAAALHRQ 81
>UniRef50_Q6UNT1 Cluster: Melanocortin 1 receptor; n=6; Sus
scrofa|Rep: Melanocortin 1 receptor - Sus scrofa (Pig)
Length = 321
Score = 32.7 bits (71), Expect = 4.4
Identities = 22/56 (39%), Positives = 26/56 (46%), Gaps = 3/56 (5%)
Frame = +3
Query: 6 RAARR-DRPQERAVPGDARRAHA-PVPGPAH-QGERLGAARHLHQQDHGLHQVRLR 164
RA R+ D+P VPG A P PG +GER G RH + L V LR
Sbjct: 25 RAGRQPDQPDGPPVPGGVHSRRALPQPGAGEPRGERAGGGRHRQEPQPALAHVLLR 80
>UniRef50_Q5T953 Cluster: Immediate early response 5-like protein;
n=11; Eutheria|Rep: Immediate early response 5-like
protein - Homo sapiens (Human)
Length = 404
Score = 32.7 bits (71), Expect = 4.4
Identities = 14/25 (56%), Positives = 17/25 (68%)
Frame = +3
Query: 111 AARHLHQQDHGLHQVRLRQPLHDHR 185
AARH Q H LHQ+ L+Q LH H+
Sbjct: 106 AARHQLHQLHQLHQLHLQQQLHQHQ 130
>UniRef50_UPI0000E212EB Cluster: PREDICTED: hypothetical protein;
n=1; Pan troglodytes|Rep: PREDICTED: hypothetical
protein - Pan troglodytes
Length = 301
Score = 32.3 bits (70), Expect = 5.8
Identities = 19/39 (48%), Positives = 21/39 (53%), Gaps = 2/39 (5%)
Frame = +3
Query: 9 AARRDRPQERAV--PGDARRAHAPVPGPAHQGERLGAAR 119
AA R+RP+ER PGDAR A P P P G AR
Sbjct: 22 AAPRERPRERLGLDPGDARAAELPAPVPPPPCPPAGRAR 60
>UniRef50_Q2S2F3 Cluster: Phage integrase, N-terminal SAM-like
domain protein; n=1; Salinibacter ruber DSM 13855|Rep:
Phage integrase, N-terminal SAM-like domain protein -
Salinibacter ruber (strain DSM 13855)
Length = 302
Score = 32.3 bits (70), Expect = 5.8
Identities = 20/62 (32%), Positives = 30/62 (48%), Gaps = 2/62 (3%)
Frame = -3
Query: 270 GVLDVHDVEGAGVALARDDGADATQIPAAGDHAEVAGVELDEVHD--LVGGDVELHRVVH 97
G + + + G+ LA D GA +QI A G A +VHD GG+++ VH
Sbjct: 233 GSITIDTLRRTGLRLAADGGASLSQIQAHGRFGNSAAAA--QVHDPETTGGNLQDSAAVH 290
Query: 96 LD 91
+D
Sbjct: 291 ID 292
>UniRef50_Q3W7E3 Cluster: Putative uncharacterized protein; n=1;
Frankia sp. EAN1pec|Rep: Putative uncharacterized
protein - Frankia sp. EAN1pec
Length = 344
Score = 32.3 bits (70), Expect = 5.8
Identities = 16/40 (40%), Positives = 18/40 (45%)
Frame = +3
Query: 9 AARRDRPQERAVPGDARRAHAPVPGPAHQGERLGAARHLH 128
AAR Q RA PGD R + PGP G A +H
Sbjct: 18 AARDGHRQARATPGDHRSSSGSAPGPIRTGRERHYAEGVH 57
>UniRef50_A5NR04 Cluster: TspO and MBR like protein; n=3;
Alphaproteobacteria|Rep: TspO and MBR like protein -
Methylobacterium sp. 4-46
Length = 543
Score = 32.3 bits (70), Expect = 5.8
Identities = 15/39 (38%), Positives = 19/39 (48%)
Frame = +3
Query: 273 RAHVRDQVKQRVHNRQWHEGVHLPPAREGSAPHHRGGAG 389
R H RD V+ V + H+ P RE + H RGG G
Sbjct: 127 RQHARDHVRVAVQHLGGRVHDHVGPERERAGDHRRGGGG 165
>UniRef50_A0CK45 Cluster: Chromosome undetermined scaffold_2, whole
genome shotgun sequence; n=4; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_2,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 558
Score = 32.3 bits (70), Expect = 5.8
Identities = 20/61 (32%), Positives = 32/61 (52%)
Frame = -1
Query: 272 VESLTCTMSKEPGWRSRETMVPTRPRFLPPVIMQRLPESNLMKSMILLVEMSSCTESFTL 93
VE+L + EP + R MV T FLP I++R ++ ++ M +L + ESF L
Sbjct: 146 VENLPLKIYDEPAYAYRGVMVDTARHFLPLKILERTIDALVINKMNVLHWHITDDESFPL 205
Query: 92 M 90
+
Sbjct: 206 L 206
>UniRef50_Q6CB67 Cluster: Similar to sp|Q15166 Homo sapiens Serum
paraoxonase/arylesterase 3; n=1; Yarrowia
lipolytica|Rep: Similar to sp|Q15166 Homo sapiens Serum
paraoxonase/arylesterase 3 - Yarrowia lipolytica
(Candida lipolytica)
Length = 421
Score = 32.3 bits (70), Expect = 5.8
Identities = 14/26 (53%), Positives = 18/26 (69%)
Frame = +1
Query: 253 VHVKDSTGHTFATRLNNVFIIGNGTK 330
VHVKD GHTF + +VF + +GTK
Sbjct: 120 VHVKDFEGHTFTSHGLDVFTLKDGTK 145
>UniRef50_Q5KET3 Cluster: Putative uncharacterized protein; n=2;
Filobasidiella neoformans|Rep: Putative uncharacterized
protein - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 477
Score = 32.3 bits (70), Expect = 5.8
Identities = 18/62 (29%), Positives = 29/62 (46%)
Frame = -1
Query: 209 PTRPRFLPPVIMQRLPESNLMKSMILLVEMSSCTESFTLMSGSGYRSVRPSCVTRYGTLL 30
P RP++LPP I + S++ S ++ SS + S T ++ G P + R T
Sbjct: 256 PIRPKYLPPTIFPSVTISSITHSPTTIIRSSSSSSSSTKINDKGKEREDP--IKRPSTFA 313
Query: 29 GP 24
P
Sbjct: 314 DP 315
>UniRef50_Q52NW9 Cluster: Wee1; n=2; Ustilago maydis|Rep: Wee1 -
Ustilago maydis (Smut fungus)
Length = 1525
Score = 32.3 bits (70), Expect = 5.8
Identities = 21/70 (30%), Positives = 28/70 (40%), Gaps = 5/70 (7%)
Frame = +3
Query: 9 AARRDRPQERAVPGDARRAHAPVPGPAHQGERLGAARHLHQ-----QDHGLHQVRLRQPL 173
A++R RP VP + + + PA Q HL HGLH + QP
Sbjct: 282 ASQRTRPPRSRVPSSSNASLPQLTTPARQRSTTSTNTHLDNTVYTSSFHGLHSLPSTQPR 341
Query: 174 HDHRRQESGS 203
HR + S S
Sbjct: 342 ITHRARASSS 351
>UniRef50_Q0CZ31 Cluster: Predicted protein; n=1; Aspergillus
terreus NIH2624|Rep: Predicted protein - Aspergillus
terreus (strain NIH 2624)
Length = 447
Score = 32.3 bits (70), Expect = 5.8
Identities = 24/52 (46%), Positives = 28/52 (53%)
Frame = -3
Query: 282 RVPGGVLDVHDVEGAGVALARDDGADATQIPAAGDHAEVAGVELDEVHDLVG 127
R G + D D G ALAR +GA I AAGD A AGV+ H+LVG
Sbjct: 245 RALGALDDAADGAGGLAALARGEGAG--HIVAAGDIAGTAGVQ----HNLVG 290
>UniRef50_UPI00015B412D Cluster: PREDICTED: similar to vrille; n=1;
Nasonia vitripennis|Rep: PREDICTED: similar to vrille -
Nasonia vitripennis
Length = 476
Score = 31.9 bits (69), Expect = 7.7
Identities = 15/45 (33%), Positives = 21/45 (46%), Gaps = 1/45 (2%)
Frame = +3
Query: 63 AHAPVPGPAHQGERLGAARHLHQQDHGLHQVRLRQPLH-DHRRQE 194
AH P+P H G + HQQ Q+ QP H H++Q+
Sbjct: 71 AHGPLPPMTHSGHHMQPQHVSHQQQQQQQQLHHPQPQHMQHQQQQ 115
>UniRef50_UPI0000DC0B02 Cluster: UPI0000DC0B02 related cluster; n=1;
Rattus norvegicus|Rep: UPI0000DC0B02 UniRef100 entry -
Rattus norvegicus
Length = 230
Score = 31.9 bits (69), Expect = 7.7
Identities = 16/47 (34%), Positives = 23/47 (48%)
Frame = -3
Query: 285 ERVPGGVLDVHDVEGAGVALARDDGADATQIPAAGDHAEVAGVELDE 145
ER+PG L VH +G G + + +AT +P G E E +E
Sbjct: 50 ERLPGASLSVHTWQGNGYSHTKSFREEATNLPGGGGDDEEGEEEEEE 96
>UniRef50_Q64G86 Cluster: Envelope glycoprotein; n=2; Human
immunodeficiency virus 1|Rep: Envelope glycoprotein -
Human immunodeficiency virus 1
Length = 144
Score = 31.9 bits (69), Expect = 7.7
Identities = 21/88 (23%), Positives = 38/88 (43%)
Frame = -1
Query: 329 FVPLPIMNTLFNLVANVCPVESLTCTMSKEPGWRSRETMVPTRPRFLPPVIMQRLPESNL 150
F PL TL ++ + +TC PGW +E + T+ ++ P + R P
Sbjct: 56 FAPLTCPGTLVGVIKLMVRF-GITC-----PGWSGKEKLTITQVYYI-PYLKNRKPSKKK 108
Query: 149 MKSMILLVEMSSCTESFTLMSGSGYRSV 66
I + M E ++ +G GY+++
Sbjct: 109 CTRTIGIGPMGKFVELVSITNGCGYKNI 136
>UniRef50_Q8UW50 Cluster: G-2 and S-phase expressed 1; n=2; Takifugu
rubripes|Rep: G-2 and S-phase expressed 1 - Fugu
rubripes (Japanese pufferfish) (Takifugu rubripes)
Length = 676
Score = 31.9 bits (69), Expect = 7.7
Identities = 21/61 (34%), Positives = 28/61 (45%)
Frame = -1
Query: 191 LPPVIMQRLPESNLMKSMILLVEMSSCTESFTLMSGSGYRSVRPSCVTRYGTLLGPVATR 12
LPP I QRL + S++ + +S S S V+P+CVTR T PV
Sbjct: 151 LPPAIQQRLLRGSSNTSIVSSLRSASAPLSTRPASAHPKSVVKPACVTRLST-SSPVTRA 209
Query: 11 R 9
R
Sbjct: 210 R 210
>UniRef50_Q4T179 Cluster: Chromosome undetermined SCAF10701, whole
genome shotgun sequence; n=1; Tetraodon
nigroviridis|Rep: Chromosome undetermined SCAF10701,
whole genome shotgun sequence - Tetraodon nigroviridis
(Green puffer)
Length = 489
Score = 31.9 bits (69), Expect = 7.7
Identities = 24/65 (36%), Positives = 27/65 (41%), Gaps = 6/65 (9%)
Frame = +3
Query: 6 RAARRDRPQERAVPGDARRAHA--PVPGPAHQGERLGA----ARHLHQQDHGLHQVRLRQ 167
R A R P R + HA P G HQ R GA +RHLH+ D L R
Sbjct: 293 RHAARHLPLRRGEQPHRQAHHALRPPRGRHHQHGRHGALRGGSRHLHRPDERLRPGRRAD 352
Query: 168 PLHDH 182
P H H
Sbjct: 353 PHHQH 357
>UniRef50_Q3VZN6 Cluster: Putative uncharacterized protein; n=1;
Frankia sp. EAN1pec|Rep: Putative uncharacterized
protein - Frankia sp. EAN1pec
Length = 369
Score = 31.9 bits (69), Expect = 7.7
Identities = 16/40 (40%), Positives = 21/40 (52%)
Frame = +3
Query: 18 RDRPQERAVPGDARRAHAPVPGPAHQGERLGAARHLHQQD 137
R +P+ RA GD R H V G GER+ H H++D
Sbjct: 257 RRQPEHRAGAGDDREGH--VSGDDGAGERVAGEAHHHEED 294
>UniRef50_Q0SEA8 Cluster: Probable isochorismatase; n=1; Rhodococcus
sp. RHA1|Rep: Probable isochorismatase - Rhodococcus sp.
(strain RHA1)
Length = 80
Score = 31.9 bits (69), Expect = 7.7
Identities = 22/59 (37%), Positives = 32/59 (54%), Gaps = 3/59 (5%)
Frame = -3
Query: 294 PGRERVPGGVLDVHDVEGAGV---ALARDDGADATQIPAAGDHAEVAGVELDEVHDLVG 127
P R+R+ V DV DV A + A D+G D+ ++ A + GV++D V DLVG
Sbjct: 9 PTRDRIRADVADVLDVPVAEIDDSANLLDEGMDSVRVMALVERWRADGVQVDLV-DLVG 66
>UniRef50_Q08YV0 Cluster: Thioesterase family protein; n=2;
Cystobacterineae|Rep: Thioesterase family protein -
Stigmatella aurantiaca DW4/3-1
Length = 723
Score = 31.9 bits (69), Expect = 7.7
Identities = 35/102 (34%), Positives = 43/102 (42%), Gaps = 12/102 (11%)
Frame = -3
Query: 372 GEAHSLPAREGDVRLRAIADY-----EHVV*PGRERVPGGVLDVHDVEGAGVALARDDGA 208
G LP+ EG VR RA A + H PG +P + +V GA VA R
Sbjct: 123 GAHQPLPSAEGPVRERAQAQHGGQPQHHGPRPGHHGIPHRRQHLGEVGGAQVAHLRVGRQ 182
Query: 207 DATQIPAAGDHAE---VAGVELDEVHDLVGG----DVELHRV 103
Q+ AGD E VA E +L GG + LHRV
Sbjct: 183 REQQVQRAGDQPEERTVADEEEVAPGNLPGGLLIREALLHRV 224
>UniRef50_A7DEP5 Cluster: Putative uncharacterized protein; n=1;
Methylobacterium extorquens PA1|Rep: Putative
uncharacterized protein - Methylobacterium extorquens
PA1
Length = 2262
Score = 31.9 bits (69), Expect = 7.7
Identities = 32/92 (34%), Positives = 39/92 (42%), Gaps = 5/92 (5%)
Frame = -3
Query: 372 GEAHSLPAREGD-VRLRAIADYEHVV*PGRERVPGGVLDVH-DVEGA---GVALARDDGA 208
GEA + A EGD V L + V GR+ V G V D +G +L G
Sbjct: 291 GEADEIRAGEGDNVVLGGVGGDTIVTGSGRDTVFGDAGQVRFDAKGLVERAESLDTAIGG 350
Query: 207 DATQIPAAGDHAEVAGVELDEVHDLVGGDVEL 112
D T AGD+ V G D+V L G D L
Sbjct: 351 DDTIEAGAGDNLVVGGAGADKVTTLGGNDAVL 382
>UniRef50_A6W4D1 Cluster: Diguanylate cyclase/phosphodiesterase with
GAF sensor; n=1; Kineococcus radiotolerans SRS30216|Rep:
Diguanylate cyclase/phosphodiesterase with GAF sensor -
Kineococcus radiotolerans SRS30216
Length = 750
Score = 31.9 bits (69), Expect = 7.7
Identities = 19/46 (41%), Positives = 21/46 (45%), Gaps = 2/46 (4%)
Frame = -3
Query: 252 DVEGAGVALARDDGADATQI--PAAGDHAEVAGVELDEVHDLVGGD 121
DVEG G A DGA A + P D A A L +H VG D
Sbjct: 2 DVEGRGRGGAHGDGAGAPAVLLPPVSDFASAAAATLRHLHQRVGMD 47
>UniRef50_A5P3I0 Cluster: Inner-membrane translocator; n=3;
Alphaproteobacteria|Rep: Inner-membrane translocator -
Methylobacterium sp. 4-46
Length = 1512
Score = 31.9 bits (69), Expect = 7.7
Identities = 21/43 (48%), Positives = 22/43 (51%), Gaps = 2/43 (4%)
Frame = +3
Query: 6 RAARRDRPQERAVPGDAR-RAHAPVPGPAHQGERLGAARH-LH 128
RAA D Q AV G AR R H P+P P G R A H LH
Sbjct: 107 RAAAVDHRQVGAVEGVARHRDHGPLPAPGQVGPRQEAPGHRLH 149
>UniRef50_A4FFP2 Cluster: Putative uncharacterized protein; n=1;
Saccharopolyspora erythraea NRRL 2338|Rep: Putative
uncharacterized protein - Saccharopolyspora erythraea
(strain NRRL 23338)
Length = 316
Score = 31.9 bits (69), Expect = 7.7
Identities = 19/40 (47%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = +3
Query: 3 TRAARRDR-PQERAVPGDARRAHAPVPGPAHQGERLGAAR 119
TRA R R P E +PG A R H P+ GP ER+ AR
Sbjct: 249 TRAVNRGRAPAEELLPGTAVRLHGPI-GPVGIVERVQPAR 287
>UniRef50_A0U838 Cluster: Putative uncharacterized protein; n=2;
Burkholderia cepacia complex|Rep: Putative
uncharacterized protein - Burkholderia cenocepacia MC0-3
Length = 582
Score = 31.9 bits (69), Expect = 7.7
Identities = 18/38 (47%), Positives = 20/38 (52%)
Frame = +3
Query: 303 RVHNRQWHEGVHLPPAREGSAPHHRGGAGQAHRSEGRR 416
R H GV PPA +AP H+ GAGQ HR RR
Sbjct: 92 RAHAHGLRVGVGDPPALR-AAPFHQLGAGQVHRFGDRR 128
>UniRef50_Q5BBP8 Cluster: Putative uncharacterized protein; n=1;
Emericella nidulans|Rep: Putative uncharacterized
protein - Emericella nidulans (Aspergillus nidulans)
Length = 2221
Score = 31.9 bits (69), Expect = 7.7
Identities = 24/79 (30%), Positives = 34/79 (43%), Gaps = 1/79 (1%)
Frame = -3
Query: 324 AIADYEHVV*PGRERVPGGVLDVHDVEGAGVALARDDGADATQIPAAGDHAEVAGV-ELD 148
A+ DY+ V P + G VHD E VA AD I G +VAG +L+
Sbjct: 363 AMLDYKEVDVPKHRQYDKGKEPVHDTESVQVAEPPLQEADENVIAVVGMSIKVAGANDLE 422
Query: 147 EVHDLVGGDVELHRVVHLD 91
E ++ H++V D
Sbjct: 423 EFQQMLKTGHSQHQLVTND 441
>UniRef50_Q8N8D1 Cluster: Programmed cell death protein 7; n=13;
Theria|Rep: Programmed cell death protein 7 - Homo
sapiens (Human)
Length = 485
Score = 31.9 bits (69), Expect = 7.7
Identities = 17/34 (50%), Positives = 17/34 (50%)
Frame = +3
Query: 18 RDRPQERAVPGDARRAHAPVPGPAHQGERLGAAR 119
RDR AV G RRA PVP H G LG R
Sbjct: 142 RDRQWLEAVFGTPRRAGCPVPQRTHAGPSLGEVR 175
>UniRef50_Q9AAL4 Cluster: N-succinylarginine dihydrolase 1; n=9;
Alphaproteobacteria|Rep: N-succinylarginine dihydrolase
1 - Caulobacter crescentus (Caulobacter vibrioides)
Length = 426
Score = 31.9 bits (69), Expect = 7.7
Identities = 17/43 (39%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Frame = +3
Query: 36 RAVPGDARRAHAPVPGPAHQGERLGAARHLH-QQDHGLHQVRL 161
R G+A HAP+P AH G+ GAA H+ +HG V +
Sbjct: 150 RVFSGEAFAVHAPLPFAAHLGDE-GAANHMRLAANHGARGVNV 191
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 435,190,833
Number of Sequences: 1657284
Number of extensions: 9330306
Number of successful extensions: 48253
Number of sequences better than 10.0: 81
Number of HSP's better than 10.0 without gapping: 44174
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 48129
length of database: 575,637,011
effective HSP length: 94
effective length of database: 419,852,315
effective search space used: 27290400475
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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