Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0013_L09
(479 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M58458-1|AAA63255.1| 263|Homo sapiens ribosomal protein S4X iso... 224 1e-58
M22146-1|AAA36597.1| 244|Homo sapiens protein ( Human scar prot... 224 1e-58
CR456735-1|CAG33016.1| 263|Homo sapiens RPS4X protein. 224 1e-58
BC100904-1|AAI00905.1| 263|Homo sapiens RPS4X protein protein. 224 1e-58
BC100903-1|AAI00904.1| 263|Homo sapiens RPS4X protein protein. 224 1e-58
BC071662-1|AAH71662.1| 263|Homo sapiens ribosomal protein S4, X... 224 1e-58
BC007308-1|AAH07308.2| 243|Homo sapiens RPS4X protein protein. 224 1e-58
BC000472-1|AAH00472.1| 263|Homo sapiens ribosomal protein S4, X... 224 1e-58
AK222479-1|BAD96199.1| 263|Homo sapiens ribosomal protein S4, X... 224 1e-58
AF041428-1|AAB96968.1| 263|Homo sapiens ribosomal protein s4 X ... 224 1e-58
BC100906-1|AAI00907.1| 262|Homo sapiens RPS4Y1 protein protein. 223 3e-58
BC100905-1|AAI00906.1| 263|Homo sapiens ribosomal protein S4, Y... 223 3e-58
M58459-1|AAA63256.1| 263|Homo sapiens ribosomal protein S4Y iso... 221 1e-57
BC010286-1|AAH10286.1| 263|Homo sapiens ribosomal protein S4, Y... 221 1e-57
AF041427-1|AAB96967.1| 263|Homo sapiens ribosomal protein s4 Y ... 221 1e-57
AK222594-1|BAD96314.1| 263|Homo sapiens ribosomal protein S4, Y... 218 7e-57
AF497481-1|AAM18074.1| 263|Homo sapiens ribosomal protein S4 pr... 216 4e-56
BC064028-1|AAH64028.1| 237|Homo sapiens immediate early respons... 33 0.39
AL158151-18|CAI12875.1| 404|Homo sapiens immediate early respon... 33 0.69
AL445584-1|CAH73043.1| 1343|Homo sapiens family with sequence si... 32 0.91
AY307931-1|AAQ73825.1| 336|Homo sapiens intestinal mucin MUC3B ... 32 1.2
AK096970-1|BAC04915.1| 485|Homo sapiens protein ( Homo sapiens ... 32 1.2
U14518-1|AAA57416.1| 140|Homo sapiens centromere protein-A prot... 31 2.8
BT007246-1|AAP35910.1| 140|Homo sapiens centromere protein A, 1... 31 2.8
BC046248-1|AAH46248.1| 503|Homo sapiens similar to CG32656-PA p... 31 2.8
BC002703-1|AAH02703.1| 140|Homo sapiens CENPA protein protein. 31 2.8
BC000881-1|AAH00881.1| 114|Homo sapiens centromere protein A pr... 31 2.8
AK001208-1|BAA91554.1| 263|Homo sapiens protein ( Homo sapiens ... 31 2.8
AC011740-3|AAX93267.1| 140|Homo sapiens unknown protein. 31 2.8
BC052959-1|AAH52959.1| 559|Homo sapiens FIP1L1 protein protein. 30 3.7
AY998490-1|AAX93513.1| 198|Homo sapiens SRY protein protein. 30 3.7
X96421-1|CAA65281.1| 204|Homo sapiens SRY protein. 30 4.8
X53772-1|CAA37790.1| 204|Homo sapiens SRY protein. 30 4.8
L10102-1|AAA60591.1| 204|Homo sapiens sex-determining region Y ... 30 4.8
L10101-1|AAA60590.1| 204|Homo sapiens sex-determining region Y ... 30 4.8
L08063-1|AAA16878.1| 204|Homo sapiens sex determination protein... 30 4.8
DQ086141-1|AAY88212.1| 198|Homo sapiens SRY protein. 30 4.8
DQ086140-1|AAY88211.1| 198|Homo sapiens SRY protein. 30 4.8
BC074924-1|AAH74924.1| 204|Homo sapiens sex determining region ... 30 4.8
BC074923-1|AAH74923.1| 204|Homo sapiens sex determining region ... 30 4.8
AY998491-1|AAY15123.1| 197|Homo sapiens mutant SRY protein prot... 30 4.8
AY998489-1|AAX93512.1| 198|Homo sapiens SRY protein protein. 30 4.8
AY608626-1|AAT37462.1| 198|Homo sapiens SRY protein. 30 4.8
AY608625-1|AAT37461.1| 198|Homo sapiens SRY protein. 30 4.8
AY601860-1|AAT39019.1| 198|Homo sapiens sex-determining region ... 30 4.8
AY601859-1|AAT39018.1| 198|Homo sapiens sex-determining region ... 30 4.8
AY601857-1|AAT39016.1| 198|Homo sapiens sex-determining region ... 30 4.8
AY601856-1|AAT39015.1| 198|Homo sapiens sex-determining region ... 30 4.8
AY601855-1|AAT39014.1| 198|Homo sapiens sex-determining region ... 30 4.8
AY601854-1|AAT39013.1| 198|Homo sapiens sex-determining region ... 30 4.8
AY601853-1|AAT39012.1| 198|Homo sapiens sex-determining region ... 30 4.8
AY601852-1|AAT39011.1| 198|Homo sapiens sex-determining region ... 30 4.8
AY573238-1|AAS79428.1| 198|Homo sapiens SRY protein protein. 30 4.8
AJ421270-1|CAD13147.1| 198|Homo sapiens sex determining region ... 30 4.8
BC110383-1|AAI10384.1| 594|Homo sapiens FIP1 like 1 (S. cerevis... 29 8.5
BC024016-1|AAH24016.1| 559|Homo sapiens FIP1L1 protein protein. 29 8.5
BC011543-1|AAH11543.1| 328|Homo sapiens FIP1L1 protein protein. 29 8.5
AY366510-1|AAQ88277.1| 594|Homo sapiens pre-mRNA 3'end processi... 29 8.5
AK075043-1|BAC11370.1| 265|Homo sapiens protein ( Homo sapiens ... 29 8.5
>M58458-1|AAA63255.1| 263|Homo sapiens ribosomal protein S4X
isoform protein.
Length = 263
Score = 224 bits (548), Expect = 1e-58
Identities = 95/133 (71%), Positives = 118/133 (88%)
Frame = +1
Query: 10 RRVATGPKSVPYLVTHDGRTLRYPDPLIKVNDSVQLDISTNKIMDFIKFDSGNLCMITGG 189
R++ G K +P+LVTHD RT+RYPDPLIKVND++Q+D+ T KI DFIKFD+GNLCM+TGG
Sbjct: 127 RKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGG 186
Query: 190 RNLGRVGTIVSRERHPGSFDIVHVKDSTGHTFATRLNNVFIIGNGTKAYISLPRGKGVRL 369
NLGR+G I +RERHPGSFD+VHVKD+ G++FATRL+N+F+IG G K +ISLPRGKG+RL
Sbjct: 187 ANLGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWISLPRGKGIRL 246
Query: 370 TIAEERDKRIAAK 408
TIAEERDKR+AAK
Sbjct: 247 TIAEERDKRLAAK 259
>M22146-1|AAA36597.1| 244|Homo sapiens protein ( Human scar protein
mRNA, complete cds. ).
Length = 244
Score = 224 bits (548), Expect = 1e-58
Identities = 95/133 (71%), Positives = 118/133 (88%)
Frame = +1
Query: 10 RRVATGPKSVPYLVTHDGRTLRYPDPLIKVNDSVQLDISTNKIMDFIKFDSGNLCMITGG 189
R++ G K +P+LVTHD RT+RYPDPLIKVND++Q+D+ T KI DFIKFD+GNLCM+TGG
Sbjct: 108 RKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGG 167
Query: 190 RNLGRVGTIVSRERHPGSFDIVHVKDSTGHTFATRLNNVFIIGNGTKAYISLPRGKGVRL 369
NLGR+G I +RERHPGSFD+VHVKD+ G++FATRL+N+F+IG G K +ISLPRGKG+RL
Sbjct: 168 ANLGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWISLPRGKGIRL 227
Query: 370 TIAEERDKRIAAK 408
TIAEERDKR+AAK
Sbjct: 228 TIAEERDKRLAAK 240
>CR456735-1|CAG33016.1| 263|Homo sapiens RPS4X protein.
Length = 263
Score = 224 bits (548), Expect = 1e-58
Identities = 95/133 (71%), Positives = 118/133 (88%)
Frame = +1
Query: 10 RRVATGPKSVPYLVTHDGRTLRYPDPLIKVNDSVQLDISTNKIMDFIKFDSGNLCMITGG 189
R++ G K +P+LVTHD RT+RYPDPLIKVND++Q+D+ T KI DFIKFD+GNLCM+TGG
Sbjct: 127 RKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGG 186
Query: 190 RNLGRVGTIVSRERHPGSFDIVHVKDSTGHTFATRLNNVFIIGNGTKAYISLPRGKGVRL 369
NLGR+G I +RERHPGSFD+VHVKD+ G++FATRL+N+F+IG G K +ISLPRGKG+RL
Sbjct: 187 ANLGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWISLPRGKGIRL 246
Query: 370 TIAEERDKRIAAK 408
TIAEERDKR+AAK
Sbjct: 247 TIAEERDKRLAAK 259
>BC100904-1|AAI00905.1| 263|Homo sapiens RPS4X protein protein.
Length = 263
Score = 224 bits (548), Expect = 1e-58
Identities = 95/133 (71%), Positives = 118/133 (88%)
Frame = +1
Query: 10 RRVATGPKSVPYLVTHDGRTLRYPDPLIKVNDSVQLDISTNKIMDFIKFDSGNLCMITGG 189
R++ G K +P+LVTHD RT+RYPDPLIKVND++Q+D+ T KI DFIKFD+GNLCM+TGG
Sbjct: 127 RKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGG 186
Query: 190 RNLGRVGTIVSRERHPGSFDIVHVKDSTGHTFATRLNNVFIIGNGTKAYISLPRGKGVRL 369
NLGR+G I +RERHPGSFD+VHVKD+ G++FATRL+N+F+IG G K +ISLPRGKG+RL
Sbjct: 187 ANLGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWISLPRGKGIRL 246
Query: 370 TIAEERDKRIAAK 408
TIAEERDKR+AAK
Sbjct: 247 TIAEERDKRLAAK 259
>BC100903-1|AAI00904.1| 263|Homo sapiens RPS4X protein protein.
Length = 263
Score = 224 bits (548), Expect = 1e-58
Identities = 95/133 (71%), Positives = 118/133 (88%)
Frame = +1
Query: 10 RRVATGPKSVPYLVTHDGRTLRYPDPLIKVNDSVQLDISTNKIMDFIKFDSGNLCMITGG 189
R++ G K +P+LVTHD RT+RYPDPLIKVND++Q+D+ T KI DFIKFD+GNLCM+TGG
Sbjct: 127 RKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGG 186
Query: 190 RNLGRVGTIVSRERHPGSFDIVHVKDSTGHTFATRLNNVFIIGNGTKAYISLPRGKGVRL 369
NLGR+G I +RERHPGSFD+VHVKD+ G++FATRL+N+F+IG G K +ISLPRGKG+RL
Sbjct: 187 ANLGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWISLPRGKGIRL 246
Query: 370 TIAEERDKRIAAK 408
TIAEERDKR+AAK
Sbjct: 247 TIAEERDKRLAAK 259
>BC071662-1|AAH71662.1| 263|Homo sapiens ribosomal protein S4,
X-linked protein.
Length = 263
Score = 224 bits (548), Expect = 1e-58
Identities = 95/133 (71%), Positives = 118/133 (88%)
Frame = +1
Query: 10 RRVATGPKSVPYLVTHDGRTLRYPDPLIKVNDSVQLDISTNKIMDFIKFDSGNLCMITGG 189
R++ G K +P+LVTHD RT+RYPDPLIKVND++Q+D+ T KI DFIKFD+GNLCM+TGG
Sbjct: 127 RKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGG 186
Query: 190 RNLGRVGTIVSRERHPGSFDIVHVKDSTGHTFATRLNNVFIIGNGTKAYISLPRGKGVRL 369
NLGR+G I +RERHPGSFD+VHVKD+ G++FATRL+N+F+IG G K +ISLPRGKG+RL
Sbjct: 187 ANLGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWISLPRGKGIRL 246
Query: 370 TIAEERDKRIAAK 408
TIAEERDKR+AAK
Sbjct: 247 TIAEERDKRLAAK 259
>BC007308-1|AAH07308.2| 243|Homo sapiens RPS4X protein protein.
Length = 243
Score = 224 bits (548), Expect = 1e-58
Identities = 95/133 (71%), Positives = 118/133 (88%)
Frame = +1
Query: 10 RRVATGPKSVPYLVTHDGRTLRYPDPLIKVNDSVQLDISTNKIMDFIKFDSGNLCMITGG 189
R++ G K +P+LVTHD RT+RYPDPLIKVND++Q+D+ T KI DFIKFD+GNLCM+TGG
Sbjct: 107 RKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGG 166
Query: 190 RNLGRVGTIVSRERHPGSFDIVHVKDSTGHTFATRLNNVFIIGNGTKAYISLPRGKGVRL 369
NLGR+G I +RERHPGSFD+VHVKD+ G++FATRL+N+F+IG G K +ISLPRGKG+RL
Sbjct: 167 ANLGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWISLPRGKGIRL 226
Query: 370 TIAEERDKRIAAK 408
TIAEERDKR+AAK
Sbjct: 227 TIAEERDKRLAAK 239
>BC000472-1|AAH00472.1| 263|Homo sapiens ribosomal protein S4,
X-linked protein.
Length = 263
Score = 224 bits (548), Expect = 1e-58
Identities = 95/133 (71%), Positives = 118/133 (88%)
Frame = +1
Query: 10 RRVATGPKSVPYLVTHDGRTLRYPDPLIKVNDSVQLDISTNKIMDFIKFDSGNLCMITGG 189
R++ G K +P+LVTHD RT+RYPDPLIKVND++Q+D+ T KI DFIKFD+GNLCM+TGG
Sbjct: 127 RKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGG 186
Query: 190 RNLGRVGTIVSRERHPGSFDIVHVKDSTGHTFATRLNNVFIIGNGTKAYISLPRGKGVRL 369
NLGR+G I +RERHPGSFD+VHVKD+ G++FATRL+N+F+IG G K +ISLPRGKG+RL
Sbjct: 187 ANLGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWISLPRGKGIRL 246
Query: 370 TIAEERDKRIAAK 408
TIAEERDKR+AAK
Sbjct: 247 TIAEERDKRLAAK 259
>AK222479-1|BAD96199.1| 263|Homo sapiens ribosomal protein S4,
X-linked X isoform variant protein.
Length = 263
Score = 224 bits (548), Expect = 1e-58
Identities = 95/133 (71%), Positives = 118/133 (88%)
Frame = +1
Query: 10 RRVATGPKSVPYLVTHDGRTLRYPDPLIKVNDSVQLDISTNKIMDFIKFDSGNLCMITGG 189
R++ G K +P+LVTHD RT+RYPDPLIKVND++Q+D+ T KI DFIKFD+GNLCM+TGG
Sbjct: 127 RKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGG 186
Query: 190 RNLGRVGTIVSRERHPGSFDIVHVKDSTGHTFATRLNNVFIIGNGTKAYISLPRGKGVRL 369
NLGR+G I +RERHPGSFD+VHVKD+ G++FATRL+N+F+IG G K +ISLPRGKG+RL
Sbjct: 187 ANLGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWISLPRGKGIRL 246
Query: 370 TIAEERDKRIAAK 408
TIAEERDKR+AAK
Sbjct: 247 TIAEERDKRLAAK 259
>AF041428-1|AAB96968.1| 263|Homo sapiens ribosomal protein s4 X
isoform protein.
Length = 263
Score = 224 bits (548), Expect = 1e-58
Identities = 95/133 (71%), Positives = 118/133 (88%)
Frame = +1
Query: 10 RRVATGPKSVPYLVTHDGRTLRYPDPLIKVNDSVQLDISTNKIMDFIKFDSGNLCMITGG 189
R++ G K +P+LVTHD RT+RYPDPLIKVND++Q+D+ T KI DFIKFD+GNLCM+TGG
Sbjct: 127 RKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGG 186
Query: 190 RNLGRVGTIVSRERHPGSFDIVHVKDSTGHTFATRLNNVFIIGNGTKAYISLPRGKGVRL 369
NLGR+G I +RERHPGSFD+VHVKD+ G++FATRL+N+F+IG G K +ISLPRGKG+RL
Sbjct: 187 ANLGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWISLPRGKGIRL 246
Query: 370 TIAEERDKRIAAK 408
TIAEERDKR+AAK
Sbjct: 247 TIAEERDKRLAAK 259
>BC100906-1|AAI00907.1| 262|Homo sapiens RPS4Y1 protein protein.
Length = 262
Score = 223 bits (544), Expect = 3e-58
Identities = 94/133 (70%), Positives = 119/133 (89%)
Frame = +1
Query: 10 RRVATGPKSVPYLVTHDGRTLRYPDPLIKVNDSVQLDISTNKIMDFIKFDSGNLCMITGG 189
R++ G K +P+LVTHD RT+RYPDP+IKVND+VQ+D+ T KI++FIKFD+GNLCM+ GG
Sbjct: 126 RKITVGVKGIPHLVTHDARTIRYPDPVIKVNDTVQIDLGTGKIINFIKFDTGNLCMVIGG 185
Query: 190 RNLGRVGTIVSRERHPGSFDIVHVKDSTGHTFATRLNNVFIIGNGTKAYISLPRGKGVRL 369
NLGRVG I +RERHPGSFD+VHVKD+ G++FATRL+N+F+IGNG K +ISLPRGKG+RL
Sbjct: 186 ANLGRVGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGNGNKPWISLPRGKGIRL 245
Query: 370 TIAEERDKRIAAK 408
T+AEERDKR+AAK
Sbjct: 246 TVAEERDKRLAAK 258
>BC100905-1|AAI00906.1| 263|Homo sapiens ribosomal protein S4,
Y-linked 1 protein.
Length = 263
Score = 223 bits (544), Expect = 3e-58
Identities = 94/133 (70%), Positives = 119/133 (89%)
Frame = +1
Query: 10 RRVATGPKSVPYLVTHDGRTLRYPDPLIKVNDSVQLDISTNKIMDFIKFDSGNLCMITGG 189
R++ G K +P+LVTHD RT+RYPDP+IKVND+VQ+D+ T KI++FIKFD+GNLCM+ GG
Sbjct: 127 RKITVGVKGIPHLVTHDARTIRYPDPVIKVNDTVQIDLGTGKIINFIKFDTGNLCMVIGG 186
Query: 190 RNLGRVGTIVSRERHPGSFDIVHVKDSTGHTFATRLNNVFIIGNGTKAYISLPRGKGVRL 369
NLGRVG I +RERHPGSFD+VHVKD+ G++FATRL+N+F+IGNG K +ISLPRGKG+RL
Sbjct: 187 ANLGRVGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGNGNKPWISLPRGKGIRL 246
Query: 370 TIAEERDKRIAAK 408
T+AEERDKR+AAK
Sbjct: 247 TVAEERDKRLAAK 259
>M58459-1|AAA63256.1| 263|Homo sapiens ribosomal protein S4Y
isoform protein.
Length = 263
Score = 221 bits (540), Expect = 1e-57
Identities = 93/133 (69%), Positives = 118/133 (88%)
Frame = +1
Query: 10 RRVATGPKSVPYLVTHDGRTLRYPDPLIKVNDSVQLDISTNKIMDFIKFDSGNLCMITGG 189
R++ G K +P+LVTHD RT+RYPDP+IKVND+VQ+D+ T KI++FIKFD+GNLCM+ GG
Sbjct: 127 RKITVGVKGIPHLVTHDARTIRYPDPVIKVNDTVQIDLGTGKIINFIKFDTGNLCMVIGG 186
Query: 190 RNLGRVGTIVSRERHPGSFDIVHVKDSTGHTFATRLNNVFIIGNGTKAYISLPRGKGVRL 369
NLGRVG I +RERHPGSFD+VHVKD+ G++FATRL+N+F+IGNG K +ISLPRGKG+RL
Sbjct: 187 ANLGRVGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGNGNKPWISLPRGKGIRL 246
Query: 370 TIAEERDKRIAAK 408
T+AEERDKR+A K
Sbjct: 247 TVAEERDKRLATK 259
>BC010286-1|AAH10286.1| 263|Homo sapiens ribosomal protein S4,
Y-linked 1 protein.
Length = 263
Score = 221 bits (540), Expect = 1e-57
Identities = 93/133 (69%), Positives = 118/133 (88%)
Frame = +1
Query: 10 RRVATGPKSVPYLVTHDGRTLRYPDPLIKVNDSVQLDISTNKIMDFIKFDSGNLCMITGG 189
R++ G K +P+LVTHD RT+RYPDP+IKVND+VQ+D+ T KI++FIKFD+GNLCM+ GG
Sbjct: 127 RKITVGVKGIPHLVTHDARTIRYPDPVIKVNDTVQIDLGTGKIINFIKFDTGNLCMVIGG 186
Query: 190 RNLGRVGTIVSRERHPGSFDIVHVKDSTGHTFATRLNNVFIIGNGTKAYISLPRGKGVRL 369
NLGRVG I +RERHPGSFD+VHVKD+ G++FATRL+N+F+IGNG K +ISLPRGKG+RL
Sbjct: 187 ANLGRVGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGNGNKPWISLPRGKGIRL 246
Query: 370 TIAEERDKRIAAK 408
T+AEERDKR+A K
Sbjct: 247 TVAEERDKRLATK 259
>AF041427-1|AAB96967.1| 263|Homo sapiens ribosomal protein s4 Y
isoform protein.
Length = 263
Score = 221 bits (540), Expect = 1e-57
Identities = 93/133 (69%), Positives = 118/133 (88%)
Frame = +1
Query: 10 RRVATGPKSVPYLVTHDGRTLRYPDPLIKVNDSVQLDISTNKIMDFIKFDSGNLCMITGG 189
R++ G K +P+LVTHD RT+RYPDP+IKVND+VQ+D+ T KI++FIKFD+GNLCM+ GG
Sbjct: 127 RKITVGVKGIPHLVTHDARTIRYPDPVIKVNDTVQIDLGTGKIINFIKFDTGNLCMVIGG 186
Query: 190 RNLGRVGTIVSRERHPGSFDIVHVKDSTGHTFATRLNNVFIIGNGTKAYISLPRGKGVRL 369
NLGRVG I +RERHPGSFD+VHVKD+ G++FATRL+N+F+IGNG K +ISLPRGKG+RL
Sbjct: 187 ANLGRVGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGNGNKPWISLPRGKGIRL 246
Query: 370 TIAEERDKRIAAK 408
T+AEERDKR+A K
Sbjct: 247 TVAEERDKRLATK 259
>AK222594-1|BAD96314.1| 263|Homo sapiens ribosomal protein S4,
Y-linked 1 Y isoform variant protein.
Length = 263
Score = 218 bits (533), Expect = 7e-57
Identities = 92/133 (69%), Positives = 117/133 (87%)
Frame = +1
Query: 10 RRVATGPKSVPYLVTHDGRTLRYPDPLIKVNDSVQLDISTNKIMDFIKFDSGNLCMITGG 189
R++ G K +P+LVTHD RT+RYPDP+IKVND+VQ+D+ T KI++FIKFD+GNLCM+ GG
Sbjct: 127 RKITVGVKGIPHLVTHDARTIRYPDPVIKVNDTVQIDLGTGKIINFIKFDTGNLCMVIGG 186
Query: 190 RNLGRVGTIVSRERHPGSFDIVHVKDSTGHTFATRLNNVFIIGNGTKAYISLPRGKGVRL 369
NLGRVG I +RERHPGSF +VHVKD+ G++FATRL+N+F+IGNG K +ISLPRGKG+RL
Sbjct: 187 ANLGRVGVITNRERHPGSFGVVHVKDANGNSFATRLSNIFVIGNGNKPWISLPRGKGIRL 246
Query: 370 TIAEERDKRIAAK 408
T+AEERDKR+A K
Sbjct: 247 TVAEERDKRLATK 259
>AF497481-1|AAM18074.1| 263|Homo sapiens ribosomal protein S4
protein.
Length = 263
Score = 216 bits (527), Expect = 4e-56
Identities = 92/133 (69%), Positives = 115/133 (86%)
Frame = +1
Query: 10 RRVATGPKSVPYLVTHDGRTLRYPDPLIKVNDSVQLDISTNKIMDFIKFDSGNLCMITGG 189
R++ G K +P+LVTHD RT+RYPDPLIKVND+VQ+D+ T KI FIKFD+GN+CM+ G
Sbjct: 127 RKITVGTKGIPHLVTHDARTIRYPDPLIKVNDTVQIDLGTGKITSFIKFDTGNVCMVIAG 186
Query: 190 RNLGRVGTIVSRERHPGSFDIVHVKDSTGHTFATRLNNVFIIGNGTKAYISLPRGKGVRL 369
NLGRVG I +RERHPGS D+VHVKD+ G++FATR++N+F+IGNG K +ISLPRGKG+RL
Sbjct: 187 ANLGRVGVITNRERHPGSCDVVHVKDANGNSFATRISNIFVIGNGNKPWISLPRGKGIRL 246
Query: 370 TIAEERDKRIAAK 408
TIAEERDKR+AAK
Sbjct: 247 TIAEERDKRLAAK 259
>BC064028-1|AAH64028.1| 237|Homo sapiens immediate early response
5-like protein.
Length = 237
Score = 33.5 bits (73), Expect = 0.39
Identities = 15/28 (53%), Positives = 18/28 (64%)
Frame = +3
Query: 102 RLGAARHLHQQDHGLHQVRLRQPLHDHR 185
R AARH Q H LHQ+ L+Q LH H+
Sbjct: 103 RESAARHQLHQLHQLHQLHLQQQLHQHQ 130
>AL158151-18|CAI12875.1| 404|Homo sapiens immediate early response
5-like protein.
Length = 404
Score = 32.7 bits (71), Expect = 0.69
Identities = 14/25 (56%), Positives = 17/25 (68%)
Frame = +3
Query: 111 AARHLHQQDHGLHQVRLRQPLHDHR 185
AARH Q H LHQ+ L+Q LH H+
Sbjct: 106 AARHQLHQLHQLHQLHLQQQLHQHQ 130
>AL445584-1|CAH73043.1| 1343|Homo sapiens family with sequence
similarity 75, member A6 protein.
Length = 1343
Score = 32.3 bits (70), Expect = 0.91
Identities = 20/62 (32%), Positives = 34/62 (54%), Gaps = 4/62 (6%)
Frame = -1
Query: 302 LFNLVANVCPVESLTCTMS----KEPGWRSRETMVPTRPRFLPPVIMQRLPESNLMKSMI 135
LFN ++NVCP++ T TMS + R+ + + P+FLP + Q +++L S
Sbjct: 446 LFNEMSNVCPIQRET-TMSPLLFQAQPLSHRQPFISSTPQFLPTPMAQAEAQAHLQSSFP 504
Query: 134 LL 129
+L
Sbjct: 505 VL 506
>AY307931-1|AAQ73825.1| 336|Homo sapiens intestinal mucin MUC3B
precursor protein.
Length = 336
Score = 31.9 bits (69), Expect = 1.2
Identities = 23/102 (22%), Positives = 40/102 (39%)
Frame = -1
Query: 392 LSRSSAMVRRTPFPRGREMYAFVPLPIMNTLFNLVANVCPVESLTCTMSKEPGWRSRETM 213
+S ++ RTP P G P P+ TL V + P+ S T T + + T
Sbjct: 220 ISSTTRTTERTPLPTGSIHTTMSPTPVFTTLKTAVTSTSPITS-TITSTNTVTSMTTTTS 278
Query: 212 VPTRPRFLPPVIMQRLPESNLMKSMILLVEMSSCTESFTLMS 87
PT L + L + + ++ ++ T TL++
Sbjct: 279 RPTATNTLSSLTSSILSSTPAPNTEVITSHTTTTTPPSTLVT 320
>AK096970-1|BAC04915.1| 485|Homo sapiens protein ( Homo sapiens
cDNA FLJ39651 fis, clone SMINT2005161, highly similar to
Mus musculus ES18 mRNA. ).
Length = 485
Score = 31.9 bits (69), Expect = 1.2
Identities = 17/34 (50%), Positives = 17/34 (50%)
Frame = +3
Query: 18 RDRPQERAVPGDARRAHAPVPGPAHQGERLGAAR 119
RDR AV G RRA PVP H G LG R
Sbjct: 142 RDRQWLEAVFGTPRRAGCPVPQRTHAGPSLGEVR 175
>U14518-1|AAA57416.1| 140|Homo sapiens centromere protein-A
protein.
Length = 140
Score = 30.7 bits (66), Expect = 2.8
Identities = 13/39 (33%), Positives = 20/39 (51%)
Frame = +3
Query: 18 RDRPQERAVPGDARRAHAPVPGPAHQGERLGAARHLHQQ 134
R R ++ P + P PGP+ +G LGA+ H H +
Sbjct: 4 RRRSRKPEAPRRRSPSPTPTPGPSRRGPSLGASSHQHSR 42
>BT007246-1|AAP35910.1| 140|Homo sapiens centromere protein A,
17kDa protein.
Length = 140
Score = 30.7 bits (66), Expect = 2.8
Identities = 13/39 (33%), Positives = 20/39 (51%)
Frame = +3
Query: 18 RDRPQERAVPGDARRAHAPVPGPAHQGERLGAARHLHQQ 134
R R ++ P + P PGP+ +G LGA+ H H +
Sbjct: 4 RRRSRKPEAPRRRSPSPTPTPGPSRRGPSLGASSHQHSR 42
>BC046248-1|AAH46248.1| 503|Homo sapiens similar to CG32656-PA
protein.
Length = 503
Score = 30.7 bits (66), Expect = 2.8
Identities = 13/25 (52%), Positives = 15/25 (60%)
Frame = +3
Query: 24 RPQERAVPGDARRAHAPVPGPAHQG 98
R + PG ARR A VPGPA +G
Sbjct: 257 RLSPESAPGPARRGRASVPGPARRG 281
>BC002703-1|AAH02703.1| 140|Homo sapiens CENPA protein protein.
Length = 140
Score = 30.7 bits (66), Expect = 2.8
Identities = 13/39 (33%), Positives = 20/39 (51%)
Frame = +3
Query: 18 RDRPQERAVPGDARRAHAPVPGPAHQGERLGAARHLHQQ 134
R R ++ P + P PGP+ +G LGA+ H H +
Sbjct: 4 RRRSRKPEAPRRRSPSPTPTPGPSRRGPSLGASSHQHSR 42
>BC000881-1|AAH00881.1| 114|Homo sapiens centromere protein A
protein.
Length = 114
Score = 30.7 bits (66), Expect = 2.8
Identities = 13/39 (33%), Positives = 20/39 (51%)
Frame = +3
Query: 18 RDRPQERAVPGDARRAHAPVPGPAHQGERLGAARHLHQQ 134
R R ++ P + P PGP+ +G LGA+ H H +
Sbjct: 4 RRRSRKPEAPRRRSPSPTPTPGPSRRGPSLGASSHQHSR 42
>AK001208-1|BAA91554.1| 263|Homo sapiens protein ( Homo sapiens
cDNA FLJ10346 fis, clone NT2RM2001004. ).
Length = 263
Score = 30.7 bits (66), Expect = 2.8
Identities = 15/34 (44%), Positives = 16/34 (47%)
Frame = -2
Query: 415 RRPSLRCACPAPPRW*GALPSRAGGRCTPSCHCR 314
R SLRC R GA P RC+P HCR
Sbjct: 128 RLQSLRCCLAGKCRAGGAGPQLEAPRCSPPLHCR 161
>AC011740-3|AAX93267.1| 140|Homo sapiens unknown protein.
Length = 140
Score = 30.7 bits (66), Expect = 2.8
Identities = 13/39 (33%), Positives = 20/39 (51%)
Frame = +3
Query: 18 RDRPQERAVPGDARRAHAPVPGPAHQGERLGAARHLHQQ 134
R R ++ P + P PGP+ +G LGA+ H H +
Sbjct: 4 RRRSRKPEAPRRRSPSPTPTPGPSRRGPSLGASSHQHSR 42
>BC052959-1|AAH52959.1| 559|Homo sapiens FIP1L1 protein protein.
Length = 559
Score = 30.3 bits (65), Expect = 3.7
Identities = 21/102 (20%), Positives = 34/102 (33%), Gaps = 1/102 (0%)
Frame = +3
Query: 18 RDRPQERAVPGDARRAHAPVPGPAHQGERLGAARHLHQQDHGLHQV-RLRQPLHDHRRQE 194
RDR +ER + R H+P P + E R ++ + H+ R R+ H RR
Sbjct: 440 RDRERERTRERERERDHSPTPSVFNSDEERYRYREYAERGYERHRASREREERHRERRHR 499
Query: 195 SGSXXXXXXXXXXXXXXXXXXXQGLHRAHVRDQVKQRVHNRQ 320
HR H + K+ ++
Sbjct: 500 EKEETRHKSSRSNSRRRHESEEGDSHRRHKHKKSKRSKEGKE 541
>AY998490-1|AAX93513.1| 198|Homo sapiens SRY protein protein.
Length = 198
Score = 30.3 bits (65), Expect = 3.7
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = +3
Query: 285 RDQVKQRVHNRQWHEGVHLPPAREGSAPHHR 377
RD + H+R H+ HLPP S+P R
Sbjct: 165 RDDCTEATHSRMEHQLGHLPPINAASSPQQR 195
>X96421-1|CAA65281.1| 204|Homo sapiens SRY protein.
Length = 204
Score = 29.9 bits (64), Expect = 4.8
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = +3
Query: 285 RDQVKQRVHNRQWHEGVHLPPAREGSAPHHR 377
RD + H+R H+ HLPP S+P R
Sbjct: 165 RDDCTKATHSRMEHQLGHLPPINAASSPQQR 195
>X53772-1|CAA37790.1| 204|Homo sapiens SRY protein.
Length = 204
Score = 29.9 bits (64), Expect = 4.8
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = +3
Query: 285 RDQVKQRVHNRQWHEGVHLPPAREGSAPHHR 377
RD + H+R H+ HLPP S+P R
Sbjct: 165 RDDCTKATHSRMEHQLGHLPPINAASSPQQR 195
>L10102-1|AAA60591.1| 204|Homo sapiens sex-determining region Y
protein.
Length = 204
Score = 29.9 bits (64), Expect = 4.8
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = +3
Query: 285 RDQVKQRVHNRQWHEGVHLPPAREGSAPHHR 377
RD + H+R H+ HLPP S+P R
Sbjct: 165 RDDCTKATHSRMEHQLGHLPPINAASSPQQR 195
>L10101-1|AAA60590.1| 204|Homo sapiens sex-determining region Y
protein.
Length = 204
Score = 29.9 bits (64), Expect = 4.8
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = +3
Query: 285 RDQVKQRVHNRQWHEGVHLPPAREGSAPHHR 377
RD + H+R H+ HLPP S+P R
Sbjct: 165 RDDCTKATHSRMEHQLGHLPPINAASSPQQR 195
>L08063-1|AAA16878.1| 204|Homo sapiens sex determination protein
protein.
Length = 204
Score = 29.9 bits (64), Expect = 4.8
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = +3
Query: 285 RDQVKQRVHNRQWHEGVHLPPAREGSAPHHR 377
RD + H+R H+ HLPP S+P R
Sbjct: 165 RDDCTKATHSRMEHQLGHLPPINAASSPQQR 195
>DQ086141-1|AAY88212.1| 198|Homo sapiens SRY protein.
Length = 198
Score = 29.9 bits (64), Expect = 4.8
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = +3
Query: 285 RDQVKQRVHNRQWHEGVHLPPAREGSAPHHR 377
RD + H+R H+ HLPP S+P R
Sbjct: 165 RDDCTKATHSRMEHQLGHLPPINAASSPQQR 195
>DQ086140-1|AAY88211.1| 198|Homo sapiens SRY protein.
Length = 198
Score = 29.9 bits (64), Expect = 4.8
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = +3
Query: 285 RDQVKQRVHNRQWHEGVHLPPAREGSAPHHR 377
RD + H+R H+ HLPP S+P R
Sbjct: 165 RDDCTKATHSRMEHQLGHLPPINAASSPQQR 195
>BC074924-1|AAH74924.1| 204|Homo sapiens sex determining region Y
protein.
Length = 204
Score = 29.9 bits (64), Expect = 4.8
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = +3
Query: 285 RDQVKQRVHNRQWHEGVHLPPAREGSAPHHR 377
RD + H+R H+ HLPP S+P R
Sbjct: 165 RDDCTKATHSRMEHQLGHLPPINAASSPQQR 195
>BC074923-1|AAH74923.1| 204|Homo sapiens sex determining region Y
protein.
Length = 204
Score = 29.9 bits (64), Expect = 4.8
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = +3
Query: 285 RDQVKQRVHNRQWHEGVHLPPAREGSAPHHR 377
RD + H+R H+ HLPP S+P R
Sbjct: 165 RDDCTKATHSRMEHQLGHLPPINAASSPQQR 195
>AY998491-1|AAY15123.1| 197|Homo sapiens mutant SRY protein
protein.
Length = 197
Score = 29.9 bits (64), Expect = 4.8
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = +3
Query: 285 RDQVKQRVHNRQWHEGVHLPPAREGSAPHHR 377
RD + H+R H+ HLPP S+P R
Sbjct: 165 RDDCTKATHSRMEHQLGHLPPINAASSPQQR 195
>AY998489-1|AAX93512.1| 198|Homo sapiens SRY protein protein.
Length = 198
Score = 29.9 bits (64), Expect = 4.8
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = +3
Query: 285 RDQVKQRVHNRQWHEGVHLPPAREGSAPHHR 377
RD + H+R H+ HLPP S+P R
Sbjct: 165 RDDCTKATHSRMEHQLGHLPPINAASSPQQR 195
>AY608626-1|AAT37462.1| 198|Homo sapiens SRY protein.
Length = 198
Score = 29.9 bits (64), Expect = 4.8
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = +3
Query: 285 RDQVKQRVHNRQWHEGVHLPPAREGSAPHHR 377
RD + H+R H+ HLPP S+P R
Sbjct: 165 RDDCTKATHSRMEHQLGHLPPINAASSPQQR 195
>AY608625-1|AAT37461.1| 198|Homo sapiens SRY protein.
Length = 198
Score = 29.9 bits (64), Expect = 4.8
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = +3
Query: 285 RDQVKQRVHNRQWHEGVHLPPAREGSAPHHR 377
RD + H+R H+ HLPP S+P R
Sbjct: 165 RDDCTKATHSRMEHQLGHLPPINAASSPQQR 195
>AY601860-1|AAT39019.1| 198|Homo sapiens sex-determining region on
Y protein.
Length = 198
Score = 29.9 bits (64), Expect = 4.8
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = +3
Query: 285 RDQVKQRVHNRQWHEGVHLPPAREGSAPHHR 377
RD + H+R H+ HLPP S+P R
Sbjct: 165 RDDCTKATHSRMEHQLGHLPPINAASSPQQR 195
>AY601859-1|AAT39018.1| 198|Homo sapiens sex-determining region on
Y protein.
Length = 198
Score = 29.9 bits (64), Expect = 4.8
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = +3
Query: 285 RDQVKQRVHNRQWHEGVHLPPAREGSAPHHR 377
RD + H+R H+ HLPP S+P R
Sbjct: 165 RDDCTKATHSRMEHQLGHLPPINAASSPQQR 195
>AY601857-1|AAT39016.1| 198|Homo sapiens sex-determining region on
Y protein.
Length = 198
Score = 29.9 bits (64), Expect = 4.8
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = +3
Query: 285 RDQVKQRVHNRQWHEGVHLPPAREGSAPHHR 377
RD + H+R H+ HLPP S+P R
Sbjct: 165 RDDCTKATHSRMEHQLGHLPPINAASSPQQR 195
>AY601856-1|AAT39015.1| 198|Homo sapiens sex-determining region on
Y protein.
Length = 198
Score = 29.9 bits (64), Expect = 4.8
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = +3
Query: 285 RDQVKQRVHNRQWHEGVHLPPAREGSAPHHR 377
RD + H+R H+ HLPP S+P R
Sbjct: 165 RDDCTKATHSRMEHQLGHLPPINAASSPQQR 195
>AY601855-1|AAT39014.1| 198|Homo sapiens sex-determining region on
Y protein.
Length = 198
Score = 29.9 bits (64), Expect = 4.8
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = +3
Query: 285 RDQVKQRVHNRQWHEGVHLPPAREGSAPHHR 377
RD + H+R H+ HLPP S+P R
Sbjct: 165 RDDCTKATHSRMEHQLGHLPPINAASSPQQR 195
>AY601854-1|AAT39013.1| 198|Homo sapiens sex-determining region on
Y protein.
Length = 198
Score = 29.9 bits (64), Expect = 4.8
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = +3
Query: 285 RDQVKQRVHNRQWHEGVHLPPAREGSAPHHR 377
RD + H+R H+ HLPP S+P R
Sbjct: 165 RDDCTKATHSRMEHQLGHLPPINAASSPQQR 195
>AY601853-1|AAT39012.1| 198|Homo sapiens sex-determining region on
Y protein.
Length = 198
Score = 29.9 bits (64), Expect = 4.8
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = +3
Query: 285 RDQVKQRVHNRQWHEGVHLPPAREGSAPHHR 377
RD + H+R H+ HLPP S+P R
Sbjct: 165 RDDCTKATHSRMEHQLGHLPPINAASSPQQR 195
>AY601852-1|AAT39011.1| 198|Homo sapiens sex-determining region on
Y protein.
Length = 198
Score = 29.9 bits (64), Expect = 4.8
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = +3
Query: 285 RDQVKQRVHNRQWHEGVHLPPAREGSAPHHR 377
RD + H+R H+ HLPP S+P R
Sbjct: 165 RDDCTKATHSRMEHQLGHLPPINAASSPQQR 195
>AY573238-1|AAS79428.1| 198|Homo sapiens SRY protein protein.
Length = 198
Score = 29.9 bits (64), Expect = 4.8
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = +3
Query: 285 RDQVKQRVHNRQWHEGVHLPPAREGSAPHHR 377
RD + H+R H+ HLPP S+P R
Sbjct: 165 RDDCTKATHSRMEHQLGHLPPINAASSPQQR 195
>AJ421270-1|CAD13147.1| 198|Homo sapiens sex determining region Y
protein.
Length = 198
Score = 29.9 bits (64), Expect = 4.8
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = +3
Query: 285 RDQVKQRVHNRQWHEGVHLPPAREGSAPHHR 377
RD + H+R H+ HLPP S+P R
Sbjct: 165 RDDCTKATHSRMEHQLGHLPPINAASSPQQR 195
>BC110383-1|AAI10384.1| 594|Homo sapiens FIP1 like 1 (S.
cerevisiae) protein.
Length = 594
Score = 29.1 bits (62), Expect = 8.5
Identities = 20/102 (19%), Positives = 34/102 (33%), Gaps = 1/102 (0%)
Frame = +3
Query: 18 RDRPQERAVPGDARRAHAPVPGPAHQGERLGAARHLHQQDHGLHQV-RLRQPLHDHRRQE 194
RDR +ER + R H+P P + E R ++ + H+ R ++ H RR
Sbjct: 475 RDRERERTRERERERDHSPTPSVFNSDEERYRYREYAERGYERHRASREKEERHRERRHR 534
Query: 195 SGSXXXXXXXXXXXXXXXXXXXQGLHRAHVRDQVKQRVHNRQ 320
HR H + K+ ++
Sbjct: 535 EKEETRHKSSRSNSRRRHESEEGDSHRRHKHKKSKRSKEGKE 576
>BC024016-1|AAH24016.1| 559|Homo sapiens FIP1L1 protein protein.
Length = 559
Score = 29.1 bits (62), Expect = 8.5
Identities = 20/102 (19%), Positives = 34/102 (33%), Gaps = 1/102 (0%)
Frame = +3
Query: 18 RDRPQERAVPGDARRAHAPVPGPAHQGERLGAARHLHQQDHGLHQV-RLRQPLHDHRRQE 194
RDR +ER + R H+P P + E R ++ + H+ R ++ H RR
Sbjct: 440 RDRERERTRERERERDHSPTPSVFNSDEERYRYREYAERGYERHRASREKEERHRERRHR 499
Query: 195 SGSXXXXXXXXXXXXXXXXXXXQGLHRAHVRDQVKQRVHNRQ 320
HR H + K+ ++
Sbjct: 500 EKEETRHKSSRSNSRRRHESEEGDSHRRHKHKKSKRSKEGKE 541
>BC011543-1|AAH11543.1| 328|Homo sapiens FIP1L1 protein protein.
Length = 328
Score = 29.1 bits (62), Expect = 8.5
Identities = 20/102 (19%), Positives = 34/102 (33%), Gaps = 1/102 (0%)
Frame = +3
Query: 18 RDRPQERAVPGDARRAHAPVPGPAHQGERLGAARHLHQQDHGLHQV-RLRQPLHDHRRQE 194
RDR +ER + R H+P P + E R ++ + H+ R ++ H RR
Sbjct: 209 RDRERERTRERERERDHSPTPSVFNSDEERYRYREYAERGYERHRASREKEERHRERRHR 268
Query: 195 SGSXXXXXXXXXXXXXXXXXXXQGLHRAHVRDQVKQRVHNRQ 320
HR H + K+ ++
Sbjct: 269 EKEETRHKSSRSNSRRRHESEEGDSHRRHKHKKSKRSKEGKE 310
>AY366510-1|AAQ88277.1| 594|Homo sapiens pre-mRNA 3'end processing
factor FIP1 protein.
Length = 594
Score = 29.1 bits (62), Expect = 8.5
Identities = 20/102 (19%), Positives = 34/102 (33%), Gaps = 1/102 (0%)
Frame = +3
Query: 18 RDRPQERAVPGDARRAHAPVPGPAHQGERLGAARHLHQQDHGLHQV-RLRQPLHDHRRQE 194
RDR +ER + R H+P P + E R ++ + H+ R ++ H RR
Sbjct: 475 RDRERERTRERERERDHSPTPSVFNSDEERYRYREYAERGYERHRASREKEERHRERRHR 534
Query: 195 SGSXXXXXXXXXXXXXXXXXXXQGLHRAHVRDQVKQRVHNRQ 320
HR H + K+ ++
Sbjct: 535 EKEETRHKSSRSNSRRRHESEEGDSHRRHKHKKSKRSKEGKE 576
>AK075043-1|BAC11370.1| 265|Homo sapiens protein ( Homo sapiens
cDNA FLJ90562 fis, clone OVARC1001163. ).
Length = 265
Score = 29.1 bits (62), Expect = 8.5
Identities = 34/119 (28%), Positives = 41/119 (34%)
Frame = +3
Query: 48 GDARRAHAPVPGPAHQGERLGAARHLHQQDHGLHQVRLRQPLHDHRRQESGSXXXXXXXX 227
GD RR A G H G RL HL L L PL RR+E
Sbjct: 139 GDQRREQA---GGWHAGRRLPELHHLRGDAVRLRGPALCLPLPGVRREEGEFTSPPGTHA 195
Query: 228 XXXXXXXXXXXQGLHRAHVRDQVKQRVHNRQWHEGVHLPPAREGSAPHHRGGAGQAHRS 404
HRA Q+ R+ H H AR G+ P GG+G + +S
Sbjct: 196 EHLQRHQGDSEPPGHRAGRHPQLLPRL--PALHAAGHARGARPGTHP-GGGGSGGSRKS 251
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 62,948,701
Number of Sequences: 237096
Number of extensions: 1328583
Number of successful extensions: 6379
Number of sequences better than 10.0: 59
Number of HSP's better than 10.0 without gapping: 5835
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6377
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 4270724850
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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