Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0013_L09
(479 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC024780-6|AAF60569.1| 259|Caenorhabditis elegans Ribosomal pro... 183 5e-47
AL132948-1|CAC51077.1| 735|Caenorhabditis elegans Hypothetical ... 33 0.14
Z81518-1|CAB04214.3| 601|Caenorhabditis elegans Hypothetical pr... 31 0.33
Z79605-1|CAB01904.1| 719|Caenorhabditis elegans Hypothetical pr... 30 0.76
U10413-2|AAA20090.1| 719|Caenorhabditis elegans lin-15A protein... 30 0.76
U10411-1|AAA20087.1| 719|Caenorhabditis elegans lin-15A protein... 30 0.76
AF164625-1|AAD47816.1| 944|Caenorhabditis elegans tandem-array-... 29 1.7
AF022974-6|AAC48041.1| 944|Caenorhabditis elegans Tandem array ... 29 1.7
Z81496-4|CAI79124.1| 77|Caenorhabditis elegans Hypothetical pr... 28 3.1
AF000263-12|AAO21392.1| 838|Caenorhabditis elegans Hypothetical... 28 3.1
AF000263-11|AAL77184.1| 866|Caenorhabditis elegans Hypothetical... 28 3.1
AF000263-8|AAK21461.1| 924|Caenorhabditis elegans Hypothetical ... 28 3.1
AF000263-7|AAK21463.1| 925|Caenorhabditis elegans Hypothetical ... 28 3.1
L10986-11|AAK93846.2| 203|Caenorhabditis elegans Hypothetical p... 28 4.0
U53180-7|AAA96289.1| 425|Caenorhabditis elegans Hypothetical pr... 27 5.3
AF099918-1|AAK29840.2| 820|Caenorhabditis elegans Hypothetical ... 27 5.3
AC006834-7|AAF40003.2| 176|Caenorhabditis elegans Lipid deplete... 27 5.3
Z98877-16|CAH60800.1| 975|Caenorhabditis elegans Hypothetical p... 27 7.0
AF077536-7|AAT81207.1| 570|Caenorhabditis elegans Hypothetical ... 27 7.0
Z81043-1|CAB02799.1| 755|Caenorhabditis elegans Hypothetical pr... 27 9.3
AF043699-7|AAK84627.1| 927|Caenorhabditis elegans Dipeptidyl pe... 27 9.3
AF043699-6|AAB97564.1| 931|Caenorhabditis elegans Dipeptidyl pe... 27 9.3
>AC024780-6|AAF60569.1| 259|Caenorhabditis elegans Ribosomal
protein, small subunitprotein 4 protein.
Length = 259
Score = 183 bits (446), Expect = 5e-47
Identities = 83/133 (62%), Positives = 104/133 (78%)
Frame = +1
Query: 10 RRVATGPKSVPYLVTHDGRTLRYPDPLIKVNDSVQLDISTNKIMDFIKFDSGNLCMITGG 189
+ V T K VP L T DGRT+RYPDP +KVND++ +IST KI D +KF+ GNL +TGG
Sbjct: 126 KSVRTVNKGVPVLTTTDGRTIRYPDPHVKVNDTIVFNISTQKITDSVKFEPGNLAYVTGG 185
Query: 190 RNLGRVGTIVSRERHPGSFDIVHVKDSTGHTFATRLNNVFIIGNGTKAYISLPRGKGVRL 369
RN+GRVG I RER PG+ DI+H+KDS GH+FATR++NVF+IG G KA +SLP G G+RL
Sbjct: 186 RNVGRVGIIGHRERLPGASDIIHIKDSAGHSFATRISNVFVIGKGNKALVSLPTGAGIRL 245
Query: 370 TIAEERDKRIAAK 408
+IAEERDKR+A K
Sbjct: 246 SIAEERDKRMAQK 258
>AL132948-1|CAC51077.1| 735|Caenorhabditis elegans Hypothetical
protein Y39B6A.1 protein.
Length = 735
Score = 32.7 bits (71), Expect = 0.14
Identities = 16/50 (32%), Positives = 21/50 (42%), Gaps = 2/50 (4%)
Frame = +3
Query: 261 QGLHRAHVRDQVKQRVHNRQW--HEGVHLPPAREGSAPHHRGGAGQAHRS 404
+G H H + VH+R H G H PA G H G G+ H +
Sbjct: 386 EGEHHEHAAHHDEHGVHHRHHGEHHGTHHSPAHHGEHGTHHGHHGEHHHA 435
Score = 26.6 bits (56), Expect = 9.3
Identities = 24/114 (21%), Positives = 27/114 (23%)
Frame = +3
Query: 66 HAPVPGPAHQGERLGAARHLHQQDHGLHQVRLRQPLHDHRRQESGSXXXXXXXXXXXXXX 245
H+P H A H H +HG H + H H G
Sbjct: 498 HSPAHHGHHGEHHHAPAHHGHHGEHGTHHGHHGE--HHHAPAHHGHHGEHGTHHGHHGSH 555
Query: 246 XXXXXQGLHRAHVRDQVKQRVHNRQWHEGVHLPPAREGSAPHHRGGAGQAHRSE 407
G H H H GVH E H A H E
Sbjct: 556 HSPAHHGHHGEHHHAPAHHGHHGHHGSHGVH-HGHHESHGHGHHAPAHHGHHGE 608
>Z81518-1|CAB04214.3| 601|Caenorhabditis elegans Hypothetical
protein F28D9.1 protein.
Length = 601
Score = 31.5 bits (68), Expect = 0.33
Identities = 18/34 (52%), Positives = 21/34 (61%)
Frame = +2
Query: 326 RRRTSPSRAGRECASPSRRSGTSASQRRSPDSSA 427
RRR SP+ A R SP RR S +RRSP SS+
Sbjct: 479 RRRRSPAAAPRRRQSPQRR--RSPRRRRSPSSSS 510
>Z79605-1|CAB01904.1| 719|Caenorhabditis elegans Hypothetical
protein ZK678.1 protein.
Length = 719
Score = 30.3 bits (65), Expect = 0.76
Identities = 13/52 (25%), Positives = 23/52 (44%)
Frame = -1
Query: 302 LFNLVANVCPVESLTCTMSKEPGWRSRETMVPTRPRFLPPVIMQRLPESNLM 147
L N + P + ++ P + P+ P+ +PP M++ PE LM
Sbjct: 660 LLNQPTSASPRRMIKVVRNRNPHLAKQVAAAPSEPKHIPPTHMEKKPEELLM 711
>U10413-2|AAA20090.1| 719|Caenorhabditis elegans lin-15A protein
protein.
Length = 719
Score = 30.3 bits (65), Expect = 0.76
Identities = 13/52 (25%), Positives = 23/52 (44%)
Frame = -1
Query: 302 LFNLVANVCPVESLTCTMSKEPGWRSRETMVPTRPRFLPPVIMQRLPESNLM 147
L N + P + ++ P + P+ P+ +PP M++ PE LM
Sbjct: 660 LLNQPTSASPRRMIKVVRNRNPHLAKQVAAAPSEPKHIPPTHMEKKPEELLM 711
>U10411-1|AAA20087.1| 719|Caenorhabditis elegans lin-15A protein
protein.
Length = 719
Score = 30.3 bits (65), Expect = 0.76
Identities = 13/52 (25%), Positives = 23/52 (44%)
Frame = -1
Query: 302 LFNLVANVCPVESLTCTMSKEPGWRSRETMVPTRPRFLPPVIMQRLPESNLM 147
L N + P + ++ P + P+ P+ +PP M++ PE LM
Sbjct: 660 LLNQPTSASPRRMIKVVRNRNPHLAKQVAAAPSEPKHIPPTHMEKKPEELLM 711
>AF164625-1|AAD47816.1| 944|Caenorhabditis elegans
tandem-array-modifier protein protein.
Length = 944
Score = 29.1 bits (62), Expect = 1.7
Identities = 19/62 (30%), Positives = 28/62 (45%), Gaps = 2/62 (3%)
Frame = +3
Query: 15 RRDRPQERAVPGDARRAHAPVPGPAHQGERLGAAR--HLHQQDHGLHQVRLRQPLHDHRR 188
R ++P V G + P P H + G R ++HQQ H +HQV Q H+R
Sbjct: 440 RMNQPMMAQVGGRPGQYIMGHPPPMHHQMQQGPPRMMYMHQQHHPMHQVE-DQMQRQHQR 498
Query: 189 QE 194
+
Sbjct: 499 MQ 500
>AF022974-6|AAC48041.1| 944|Caenorhabditis elegans Tandem array
expression modifierprotein 1 protein.
Length = 944
Score = 29.1 bits (62), Expect = 1.7
Identities = 19/62 (30%), Positives = 28/62 (45%), Gaps = 2/62 (3%)
Frame = +3
Query: 15 RRDRPQERAVPGDARRAHAPVPGPAHQGERLGAAR--HLHQQDHGLHQVRLRQPLHDHRR 188
R ++P V G + P P H + G R ++HQQ H +HQV Q H+R
Sbjct: 440 RMNQPMMAQVGGRPGQYIMGHPPPMHHQMQQGPPRMMYMHQQHHPMHQVE-DQMQRQHQR 498
Query: 189 QE 194
+
Sbjct: 499 MQ 500
>Z81496-4|CAI79124.1| 77|Caenorhabditis elegans Hypothetical
protein F09C6.13 protein.
Length = 77
Score = 28.3 bits (60), Expect = 3.1
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = +1
Query: 151 KFDSGNLCMITGGRNLGRVGTIVSRERHPGSFDIVHVK 264
K DSGN + T R++ R+ V E H D+ H++
Sbjct: 12 KVDSGNTTINTTNRSINRIDNSVDYESHGLDTDLEHLQ 49
>AF000263-12|AAO21392.1| 838|Caenorhabditis elegans Hypothetical
protein T08B2.5f protein.
Length = 838
Score = 28.3 bits (60), Expect = 3.1
Identities = 18/35 (51%), Positives = 21/35 (60%)
Frame = +2
Query: 323 ARRRTSPSRAGRECASPSRRSGTSASQRRSPDSSA 427
+RRRTS R R+ S RR S S+ RSP SSA
Sbjct: 51 SRRRTSRDR--RDDRSSRRRRDRSHSRSRSPPSSA 83
>AF000263-11|AAL77184.1| 866|Caenorhabditis elegans Hypothetical
protein T08B2.5c protein.
Length = 866
Score = 28.3 bits (60), Expect = 3.1
Identities = 18/35 (51%), Positives = 21/35 (60%)
Frame = +2
Query: 323 ARRRTSPSRAGRECASPSRRSGTSASQRRSPDSSA 427
+RRRTS R R+ S RR S S+ RSP SSA
Sbjct: 79 SRRRTSRDR--RDDRSSRRRRDRSHSRSRSPPSSA 111
>AF000263-8|AAK21461.1| 924|Caenorhabditis elegans Hypothetical
protein T08B2.5a protein.
Length = 924
Score = 28.3 bits (60), Expect = 3.1
Identities = 18/35 (51%), Positives = 21/35 (60%)
Frame = +2
Query: 323 ARRRTSPSRAGRECASPSRRSGTSASQRRSPDSSA 427
+RRRTS R R+ S RR S S+ RSP SSA
Sbjct: 137 SRRRTSRDR--RDDRSSRRRRDRSHSRSRSPPSSA 169
>AF000263-7|AAK21463.1| 925|Caenorhabditis elegans Hypothetical
protein T08B2.5b protein.
Length = 925
Score = 28.3 bits (60), Expect = 3.1
Identities = 18/35 (51%), Positives = 21/35 (60%)
Frame = +2
Query: 323 ARRRTSPSRAGRECASPSRRSGTSASQRRSPDSSA 427
+RRRTS R R+ S RR S S+ RSP SSA
Sbjct: 138 SRRRTSRDR--RDDRSSRRRRDRSHSRSRSPPSSA 170
>L10986-11|AAK93846.2| 203|Caenorhabditis elegans Hypothetical
protein F10E9.10 protein.
Length = 203
Score = 27.9 bits (59), Expect = 4.0
Identities = 23/91 (25%), Positives = 40/91 (43%)
Frame = -1
Query: 362 TPFPRGREMYAFVPLPIMNTLFNLVANVCPVESLTCTMSKEPGWRSRETMVPTRPRFLPP 183
+P+PR R + I+ + L N+ ++ C + KE W S ++ P P
Sbjct: 11 SPYPRTRLPLYLYTVSIIISCSLLYWNLLYCKNYDCVVEKEFRWGSTRHLLQYFPVIAAP 70
Query: 182 VIMQRLPESNLMKSMILLVEMSSCTESFTLM 90
+IM + S L+ + + SSC +F M
Sbjct: 71 IIMV-ISFSWLI--IAIYYSSSSCVLTFNFM 98
>U53180-7|AAA96289.1| 425|Caenorhabditis elegans Hypothetical
protein D1014.2 protein.
Length = 425
Score = 27.5 bits (58), Expect = 5.3
Identities = 13/37 (35%), Positives = 21/37 (56%)
Frame = +1
Query: 70 LRYPDPLIKVNDSVQLDISTNKIMDFIKFDSGNLCMI 180
L +PD LIK+ Q++ STN F+ +D L ++
Sbjct: 34 LLFPDFLIKIRLLFQMNASTNATTTFVPWDHKTLQIV 70
>AF099918-1|AAK29840.2| 820|Caenorhabditis elegans Hypothetical
protein H05C05.1a protein.
Length = 820
Score = 27.5 bits (58), Expect = 5.3
Identities = 17/80 (21%), Positives = 25/80 (31%), Gaps = 1/80 (1%)
Frame = +3
Query: 171 LHDHRRQESGSXXXXXXXXXXXXXXXXXXXQGLHRAHVRDQVKQRVHNRQWHEGVHLPPA 350
L R+++ G H V D + + H G H PP+
Sbjct: 337 LEKRRQEKEKEQKAAAAAAAAAAAAAADPVAGDHENIVSDSTQASRSSTSSHRGFHGPPS 396
Query: 351 REGSAPHHRG-GAGQAHRSE 407
GS G G G H+ +
Sbjct: 397 HRGSYQGSSGRGGGGYHQQQ 416
>AC006834-7|AAF40003.2| 176|Caenorhabditis elegans Lipid depleted
protein 5 protein.
Length = 176
Score = 27.5 bits (58), Expect = 5.3
Identities = 12/45 (26%), Positives = 25/45 (55%)
Frame = +1
Query: 10 RRVATGPKSVPYLVTHDGRTLRYPDPLIKVNDSVQLDISTNKIMD 144
R ++TG ++P +HD + + D L K + + +S+++ MD
Sbjct: 18 RCLSTGKDNLPVTRSHDAKKVELNDILDKPSQKTPVKVSSDETMD 62
>Z98877-16|CAH60800.1| 975|Caenorhabditis elegans Hypothetical
protein Y69H2.10b protein.
Length = 975
Score = 27.1 bits (57), Expect = 7.0
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = -2
Query: 367 GALPSRAGGRCTPSCHCR 314
GA AG CTP C CR
Sbjct: 881 GAPKCEAGSACTPGCFCR 898
>AF077536-7|AAT81207.1| 570|Caenorhabditis elegans Hypothetical
protein C16A11.2a protein.
Length = 570
Score = 27.1 bits (57), Expect = 7.0
Identities = 11/34 (32%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Frame = -1
Query: 119 SSC-TESFTLMSGSGYRSVRPSCVTRYGTLLGPV 21
S+C + ++S SGY R SC+ Y ++G +
Sbjct: 15 SNCRNDIIAMLSASGYHRARVSCLNDYDKIVGGI 48
>Z81043-1|CAB02799.1| 755|Caenorhabditis elegans Hypothetical
protein C29F3.1 protein.
Length = 755
Score = 26.6 bits (56), Expect = 9.3
Identities = 12/42 (28%), Positives = 19/42 (45%)
Frame = +1
Query: 205 VGTIVSRERHPGSFDIVHVKDSTGHTFATRLNNVFIIGNGTK 330
+GT + H GS D++ GH +F+ G+G K
Sbjct: 594 LGTALGPRVHGGSVDLLSELVRAGHKGRKTSKGIFVYGDGAK 635
>AF043699-7|AAK84627.1| 927|Caenorhabditis elegans Dipeptidyl
peptidase four (iv)family protein 3, isoform b protein.
Length = 927
Score = 26.6 bits (56), Expect = 9.3
Identities = 11/33 (33%), Positives = 17/33 (51%)
Frame = +3
Query: 261 QGLHRAHVRDQVKQRVHNRQWHEGVHLPPAREG 359
+ +H AH+ V + + +WHE V P R G
Sbjct: 858 ENVHFAHLTHLVDECIKKGKWHELVIFPNERHG 890
>AF043699-6|AAB97564.1| 931|Caenorhabditis elegans Dipeptidyl
peptidase four (iv)family protein 3, isoform a protein.
Length = 931
Score = 26.6 bits (56), Expect = 9.3
Identities = 11/33 (33%), Positives = 17/33 (51%)
Frame = +3
Query: 261 QGLHRAHVRDQVKQRVHNRQWHEGVHLPPAREG 359
+ +H AH+ V + + +WHE V P R G
Sbjct: 862 ENVHFAHLTHLVDECIKKGKWHELVIFPNERHG 894
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,404,728
Number of Sequences: 27780
Number of extensions: 194129
Number of successful extensions: 872
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 825
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 870
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 882200194
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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