Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0013_L06
         (618 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ257415-1|ABB81846.1|  430|Apis mellifera yellow-like protein p...    25   0.78 
DQ667182-1|ABG75734.1|  445|Apis mellifera GABA-gated chloride c...    22   4.2  
DQ667181-1|ABG75733.1|  445|Apis mellifera GABA-gated chloride c...    22   4.2  
AF094822-1|AAC63381.1|  365|Apis mellifera GABA receptor Rdl sub...    22   4.2  
DQ667187-1|ABG75739.1|  428|Apis mellifera histamine-gated chlor...    22   5.5  
AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    21   7.3  
DQ325132-1|ABD14146.1|  189|Apis mellifera complementary sex det...    21   9.6  
DQ325131-1|ABD14145.1|  189|Apis mellifera complementary sex det...    21   9.6  
AY855337-1|AAW47987.1|  510|Apis mellifera tyrosine hydroxylase ...    21   9.6  
AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase pro...    21   9.6  

>DQ257415-1|ABB81846.1|  430|Apis mellifera yellow-like protein
           protein.
          Length = 430

 Score = 24.6 bits (51), Expect = 0.78
 Identities = 16/59 (27%), Positives = 27/59 (45%)
 Frame = -3

Query: 406 FVALSLVLY**NQIVNGLASQETLFGQNHFQGLFLKHYSTHVYLYDCSLLVFVFLCQYV 230
           FV L+ +LY  N+ V+G+    T FGQ      F      + Y  + S  + +   +Y+
Sbjct: 5   FVLLASLLYLGNESVHGIQKWGTQFGQAPLLERFFWRTLDYAYPDEASKTMAMMKGEYI 63


>DQ667182-1|ABG75734.1|  445|Apis mellifera GABA-gated chloride
           channel protein.
          Length = 445

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = -3

Query: 292 STHVYLYDCSLLVFVFLCQYVKI 224
           S  VYL  C ++VF  L +Y  +
Sbjct: 282 SIDVYLGTCFVMVFASLLEYATV 304


>DQ667181-1|ABG75733.1|  445|Apis mellifera GABA-gated chloride
           channel protein.
          Length = 445

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = -3

Query: 292 STHVYLYDCSLLVFVFLCQYVKI 224
           S  VYL  C ++VF  L +Y  +
Sbjct: 282 SIDVYLGTCFVMVFASLLEYATV 304


>AF094822-1|AAC63381.1|  365|Apis mellifera GABA receptor Rdl
           subunit protein.
          Length = 365

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = -3

Query: 292 STHVYLYDCSLLVFVFLCQYVKI 224
           S  VYL  C ++VF  L +Y  +
Sbjct: 221 SIDVYLGTCFVMVFASLLEYATV 243


>DQ667187-1|ABG75739.1|  428|Apis mellifera histamine-gated chloride
           channel protein.
          Length = 428

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 8/26 (30%), Positives = 16/26 (61%)
 Frame = +2

Query: 125 MKVLNFLLKMYKSKGVIYYIQVN*KV 202
           M + N  L +YK K ++Y +++  K+
Sbjct: 136 MTIPNHYLWLYKDKTILYMVKLTLKL 161


>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 10/29 (34%), Positives = 14/29 (48%)
 Frame = +1

Query: 439 INENKIVYAKHTSLSEAKKINGLRAMFDE 525
           I EN+     +T  S    + GL  +FDE
Sbjct: 117 IVENQYAVENNTGSSLCDLVQGLERLFDE 145


>DQ325132-1|ABD14146.1|  189|Apis mellifera complementary sex
           determiner protein.
          Length = 189

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 7/24 (29%), Positives = 13/24 (54%)
 Frame = -1

Query: 609 ETDRNIWVFYQIFNRYTYRHYSNW 538
           ET +   +   + N Y Y +Y+N+
Sbjct: 74  ETSKEPKIISSLSNNYKYSNYNNY 97


>DQ325131-1|ABD14145.1|  189|Apis mellifera complementary sex
           determiner protein.
          Length = 189

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 7/24 (29%), Positives = 13/24 (54%)
 Frame = -1

Query: 609 ETDRNIWVFYQIFNRYTYRHYSNW 538
           ET +   +   + N Y Y +Y+N+
Sbjct: 74  ETSKEPKIISSLSNNYKYSNYNNY 97


>AY855337-1|AAW47987.1|  510|Apis mellifera tyrosine hydroxylase
           protein.
          Length = 510

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 9/25 (36%), Positives = 14/25 (56%), Gaps = 3/25 (12%)
 Frame = -3

Query: 145 QKIQHF---HHLP*PYNLHRIFGHL 80
           Q I+H    +H P P  +H + GH+
Sbjct: 320 QYIRHIKSPYHTPEPDCIHELLGHM 344


>AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase
           protein.
          Length = 588

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 7/7 (100%), Positives = 7/7 (100%)
 Frame = -3

Query: 463 RKQFYFH 443
           RKQFYFH
Sbjct: 186 RKQFYFH 192


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.316    0.135    0.380 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 157,468
Number of Sequences: 438
Number of extensions: 2873
Number of successful extensions: 12
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18337950
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)