Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0013_L05
(602 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF308802-1|AAG34679.1| 973|Homo sapiens vacuolar protein sortin... 102 1e-21
AB040908-1|BAA95999.1| 986|Homo sapiens KIAA1475 protein protein. 102 1e-21
BC028689-1|AAH28689.2| 1050|Homo sapiens tripartite motif-contai... 35 0.19
AF119042-1|AAD17258.1| 1016|Homo sapiens transcriptional interme... 35 0.19
AF009353-1|AAB63585.1| 1012|Homo sapiens transcription intermedi... 35 0.19
M11437-2|AAB59550.1| 644|Homo sapiens kininogen protein. 32 1.4
CR533513-1|CAG38544.1| 362|Homo sapiens RNF32 protein. 31 2.4
BT007037-1|AAP35686.1| 235|Homo sapiens ring finger protein 32 ... 31 2.4
BC028120-1|AAH28120.1| 256|Homo sapiens RNF32 protein protein. 31 2.4
BC015416-1|AAH15416.1| 235|Homo sapiens RNF32 protein protein. 31 2.4
AF441222-1|AAM18664.1| 362|Homo sapiens ring finger protein RNF... 31 2.4
BC063882-1|AAH63882.1| 1208|Homo sapiens zinc finger DAZ interac... 31 3.1
AY495710-1|AAS75122.1| 275|Homo sapiens UURF2 ubiquitin ligase ... 31 3.1
AY227652-1|AAO72968.1| 652|Homo sapiens RNA-binding RING-H2 pro... 31 3.1
AB014575-1|BAA31650.2| 1217|Homo sapiens KIAA0675 protein protein. 31 3.1
BC065563-1|AAH65563.1| 941|Homo sapiens vacuolar protein sortin... 31 4.1
BC012051-1|AAH12051.1| 331|Homo sapiens VPS11 protein protein. 31 4.1
AK223158-1|BAD96878.1| 941|Homo sapiens vacuolar protein sortin... 31 4.1
AF308800-1|AAG34677.1| 941|Homo sapiens vacuolar protein sortin... 31 4.1
AF258558-1|AAG23761.1| 484|Homo sapiens PP3476 protein. 31 4.1
AB027508-1|BAA95163.2| 941|Homo sapiens hVPS11 protein. 31 4.1
AK026012-1|BAB15320.1| 331|Homo sapiens protein ( Homo sapiens ... 30 5.4
BC013036-1|AAH13036.1| 192|Homo sapiens ring finger protein 183... 30 7.2
>AF308802-1|AAG34679.1| 973|Homo sapiens vacuolar protein sorting
protein 18 protein.
Length = 973
Score = 102 bits (244), Expect = 1e-21
Identities = 52/132 (39%), Positives = 72/132 (54%), Gaps = 8/132 (6%)
Frame = +1
Query: 4 RGRSVRVSVTDACSLCEITLLLRPFYLFPCGHKFHSDCLTGETMPILSPARRKKLSDLQR 183
RGR V D C+ C+ LL RPFYLF CGH FH+DCL P L ++ +L +LQR
Sbjct: 841 RGRYGTVEPQDKCATCDFPLLNRPFYLFLCGHMFHADCLLQAVRPGLPAYKQARLEELQR 900
Query: 184 QLSV--------LSNIELSTATSSGLPLREVLKNEIDDIVASECIFCGEHMITCIDKPFI 339
+L E ++ P RE LK ++D++VA+EC++CGE MI ID+PFI
Sbjct: 901 KLGAAPPPAKGSARAKEAEGGAATAGPSREQLKADLDELVAAECVYCGELMIRSIDRPFI 960
Query: 340 ANDDWDRVMKEW 375
++ W
Sbjct: 961 DPQRYEEEQLSW 972
>AB040908-1|BAA95999.1| 986|Homo sapiens KIAA1475 protein protein.
Length = 986
Score = 102 bits (244), Expect = 1e-21
Identities = 52/132 (39%), Positives = 72/132 (54%), Gaps = 8/132 (6%)
Frame = +1
Query: 4 RGRSVRVSVTDACSLCEITLLLRPFYLFPCGHKFHSDCLTGETMPILSPARRKKLSDLQR 183
RGR V D C+ C+ LL RPFYLF CGH FH+DCL P L ++ +L +LQR
Sbjct: 854 RGRYGTVEPQDKCATCDFPLLNRPFYLFLCGHMFHADCLLQAVRPGLPAYKQARLEELQR 913
Query: 184 QLSV--------LSNIELSTATSSGLPLREVLKNEIDDIVASECIFCGEHMITCIDKPFI 339
+L E ++ P RE LK ++D++VA+EC++CGE MI ID+PFI
Sbjct: 914 KLGAAPPPAKGSARAKEAEGGAATAGPSREQLKADLDELVAAECVYCGELMIRSIDRPFI 973
Query: 340 ANDDWDRVMKEW 375
++ W
Sbjct: 974 DPQRYEEEQLSW 985
>BC028689-1|AAH28689.2| 1050|Homo sapiens tripartite
motif-containing 24 protein.
Length = 1050
Score = 35.1 bits (77), Expect = 0.19
Identities = 15/49 (30%), Positives = 24/49 (48%)
Frame = +1
Query: 7 GRSVRVSVTDACSLCEITLLLRPFYLFPCGHKFHSDCLTGETMPILSPA 153
G + R+++ D C++C + R L PC H F CL ++ PA
Sbjct: 45 GEAARLNLLDTCAVCHQNIQSRAPKLLPCLHSFCQRCLPAPQRYLMLPA 93
>AF119042-1|AAD17258.1| 1016|Homo sapiens transcriptional
intermediary factor 1 alpha protein.
Length = 1016
Score = 35.1 bits (77), Expect = 0.19
Identities = 15/49 (30%), Positives = 24/49 (48%)
Frame = +1
Query: 7 GRSVRVSVTDACSLCEITLLLRPFYLFPCGHKFHSDCLTGETMPILSPA 153
G + R+++ D C++C + R L PC H F CL ++ PA
Sbjct: 45 GEAARLNLLDTCAVCHQNIQSRAPKLLPCLHSFCQRCLPAPQRYLMLPA 93
>AF009353-1|AAB63585.1| 1012|Homo sapiens transcription intermediary
factor 1 protein.
Length = 1012
Score = 35.1 bits (77), Expect = 0.19
Identities = 15/49 (30%), Positives = 24/49 (48%)
Frame = +1
Query: 7 GRSVRVSVTDACSLCEITLLLRPFYLFPCGHKFHSDCLTGETMPILSPA 153
G + R+++ D C++C + R L PC H F CL ++ PA
Sbjct: 42 GEAARLNLLDTCAVCHQNIQSRAPKLLPCLHSFCQRCLPAPQRYLMLPA 90
>M11437-2|AAB59550.1| 644|Homo sapiens kininogen protein.
Length = 644
Score = 32.3 bits (70), Expect = 1.4
Identities = 18/55 (32%), Positives = 24/55 (43%), Gaps = 2/55 (3%)
Frame = +3
Query: 210 AVDGDVERAAAQGSAQERDRRHSRERVHLLRRAHDHVHRQAVHRER--RLGQGHE 368
A D + + QG + D H ++R H L H H Q +R LG GHE
Sbjct: 412 AQDEERDSGKEQGHTRRHDWGHEKQRKHNLGHGHKHERDQGHGHQRGHGLGHGHE 466
>CR533513-1|CAG38544.1| 362|Homo sapiens RNF32 protein.
Length = 362
Score = 31.5 bits (68), Expect = 2.4
Identities = 12/27 (44%), Positives = 14/27 (51%)
Frame = +1
Query: 40 CSLCEITLLLRPFYLFPCGHKFHSDCL 120
C +C+ LRP L C H FH CL
Sbjct: 127 CPICKEEFELRPQVLLSCSHVFHKACL 153
>BT007037-1|AAP35686.1| 235|Homo sapiens ring finger protein 32
protein.
Length = 235
Score = 31.5 bits (68), Expect = 2.4
Identities = 12/27 (44%), Positives = 14/27 (51%)
Frame = +1
Query: 40 CSLCEITLLLRPFYLFPCGHKFHSDCL 120
C +C+ LRP L C H FH CL
Sbjct: 127 CPICKEEFELRPQVLLSCSHVFHKACL 153
>BC028120-1|AAH28120.1| 256|Homo sapiens RNF32 protein protein.
Length = 256
Score = 31.5 bits (68), Expect = 2.4
Identities = 12/27 (44%), Positives = 14/27 (51%)
Frame = +1
Query: 40 CSLCEITLLLRPFYLFPCGHKFHSDCL 120
C +C+ LRP L C H FH CL
Sbjct: 127 CPICKEEFELRPQVLLSCSHVFHKACL 153
>BC015416-1|AAH15416.1| 235|Homo sapiens RNF32 protein protein.
Length = 235
Score = 31.5 bits (68), Expect = 2.4
Identities = 12/27 (44%), Positives = 14/27 (51%)
Frame = +1
Query: 40 CSLCEITLLLRPFYLFPCGHKFHSDCL 120
C +C+ LRP L C H FH CL
Sbjct: 127 CPICKEEFELRPQVLLSCSHVFHKACL 153
>AF441222-1|AAM18664.1| 362|Homo sapiens ring finger protein RNF32
protein.
Length = 362
Score = 31.5 bits (68), Expect = 2.4
Identities = 12/27 (44%), Positives = 14/27 (51%)
Frame = +1
Query: 40 CSLCEITLLLRPFYLFPCGHKFHSDCL 120
C +C+ LRP L C H FH CL
Sbjct: 127 CPICKEEFELRPQVLLSCSHVFHKACL 153
>BC063882-1|AAH63882.1| 1208|Homo sapiens zinc finger DAZ interacting
protein 3 protein.
Length = 1208
Score = 31.1 bits (67), Expect = 3.1
Identities = 10/29 (34%), Positives = 15/29 (51%)
Frame = +1
Query: 34 DACSLCEITLLLRPFYLFPCGHKFHSDCL 120
+ C +C L + PC HKFH+ C+
Sbjct: 1146 EPCVICHENLSPENLSVLPCAHKFHAQCI 1174
>AY495710-1|AAS75122.1| 275|Homo sapiens UURF2 ubiquitin ligase
protein.
Length = 275
Score = 31.1 bits (67), Expect = 3.1
Identities = 10/29 (34%), Positives = 15/29 (51%)
Frame = +1
Query: 34 DACSLCEITLLLRPFYLFPCGHKFHSDCL 120
+ C +C L + PC HKFH+ C+
Sbjct: 213 EPCVICHENLSPENLSVLPCAHKFHAQCI 241
>AY227652-1|AAO72968.1| 652|Homo sapiens RNA-binding RING-H2
protein-ubiquitin ligase protein.
Length = 652
Score = 31.1 bits (67), Expect = 3.1
Identities = 10/29 (34%), Positives = 15/29 (51%)
Frame = +1
Query: 34 DACSLCEITLLLRPFYLFPCGHKFHSDCL 120
+ C +C L + PC HKFH+ C+
Sbjct: 590 EPCVICHENLSPENLSVLPCAHKFHAQCI 618
>AB014575-1|BAA31650.2| 1217|Homo sapiens KIAA0675 protein protein.
Length = 1217
Score = 31.1 bits (67), Expect = 3.1
Identities = 10/29 (34%), Positives = 15/29 (51%)
Frame = +1
Query: 34 DACSLCEITLLLRPFYLFPCGHKFHSDCL 120
+ C +C L + PC HKFH+ C+
Sbjct: 1155 EPCVICHENLSPENLSVLPCAHKFHAQCI 1183
>BC065563-1|AAH65563.1| 941|Homo sapiens vacuolar protein sorting
11 homolog (S. cerevisiae) protein.
Length = 941
Score = 30.7 bits (66), Expect = 4.1
Identities = 18/54 (33%), Positives = 23/54 (42%), Gaps = 5/54 (9%)
Frame = +1
Query: 40 CSLCEITLLLRPFYLFPCGHKFHSDCL-----TGETMPILSPARRKKLSDLQRQ 186
CS+C L L P F CGH FH C + P P RK + ++ Q
Sbjct: 822 CSICNSALEL-PSVHFLCGHSFHQHCFESYSESDADCPTCLPENRKVMDMIRAQ 874
>BC012051-1|AAH12051.1| 331|Homo sapiens VPS11 protein protein.
Length = 331
Score = 30.7 bits (66), Expect = 4.1
Identities = 18/54 (33%), Positives = 23/54 (42%), Gaps = 5/54 (9%)
Frame = +1
Query: 40 CSLCEITLLLRPFYLFPCGHKFHSDCL-----TGETMPILSPARRKKLSDLQRQ 186
CS+C L L P F CGH FH C + P P RK + ++ Q
Sbjct: 212 CSICNSALEL-PSVHFLCGHSFHQHCFESYSESDADCPTCLPENRKVMDMIRAQ 264
>AK223158-1|BAD96878.1| 941|Homo sapiens vacuolar protein sorting
11 (yeast homolog) variant protein.
Length = 941
Score = 30.7 bits (66), Expect = 4.1
Identities = 18/54 (33%), Positives = 23/54 (42%), Gaps = 5/54 (9%)
Frame = +1
Query: 40 CSLCEITLLLRPFYLFPCGHKFHSDCL-----TGETMPILSPARRKKLSDLQRQ 186
CS+C L L P F CGH FH C + P P RK + ++ Q
Sbjct: 822 CSICNSALEL-PSVHFLCGHSFHQHCFESYSESDADCPTCLPENRKVMDMIRAQ 874
>AF308800-1|AAG34677.1| 941|Homo sapiens vacuolar protein sorting
protein 11 protein.
Length = 941
Score = 30.7 bits (66), Expect = 4.1
Identities = 18/54 (33%), Positives = 23/54 (42%), Gaps = 5/54 (9%)
Frame = +1
Query: 40 CSLCEITLLLRPFYLFPCGHKFHSDCL-----TGETMPILSPARRKKLSDLQRQ 186
CS+C L L P F CGH FH C + P P RK + ++ Q
Sbjct: 822 CSICNSALEL-PSVHFLCGHSFHQHCFESYSESDADCPTCLPENRKVMDMIRAQ 874
>AF258558-1|AAG23761.1| 484|Homo sapiens PP3476 protein.
Length = 484
Score = 30.7 bits (66), Expect = 4.1
Identities = 18/54 (33%), Positives = 23/54 (42%), Gaps = 5/54 (9%)
Frame = +1
Query: 40 CSLCEITLLLRPFYLFPCGHKFHSDCL-----TGETMPILSPARRKKLSDLQRQ 186
CS+C L L P F CGH FH C + P P RK + ++ Q
Sbjct: 278 CSICNSALEL-PSVHFLCGHSFHQHCFESYSESDADCPTCLPENRKVMDMIRAQ 330
>AB027508-1|BAA95163.2| 941|Homo sapiens hVPS11 protein.
Length = 941
Score = 30.7 bits (66), Expect = 4.1
Identities = 18/54 (33%), Positives = 23/54 (42%), Gaps = 5/54 (9%)
Frame = +1
Query: 40 CSLCEITLLLRPFYLFPCGHKFHSDCL-----TGETMPILSPARRKKLSDLQRQ 186
CS+C L L P F CGH FH C + P P RK + ++ Q
Sbjct: 822 CSICNSALEL-PSVHFLCGHSFHQHCFESYSESDADCPTCLPENRKVMDMIRAQ 874
>AK026012-1|BAB15320.1| 331|Homo sapiens protein ( Homo sapiens
cDNA: FLJ22359 fis, clone HRC06443. ).
Length = 331
Score = 30.3 bits (65), Expect = 5.4
Identities = 13/26 (50%), Positives = 14/26 (53%)
Frame = +1
Query: 40 CSLCEITLLLRPFYLFPCGHKFHSDC 117
CS+C L L P F CGH FH C
Sbjct: 212 CSICNSALEL-PSVHFLCGHSFHQHC 236
>BC013036-1|AAH13036.1| 192|Homo sapiens ring finger protein 183
protein.
Length = 192
Score = 29.9 bits (64), Expect = 7.2
Identities = 18/66 (27%), Positives = 35/66 (53%)
Frame = +1
Query: 82 LFPCGHKFHSDCLTGETMPILSPARRKKLSDLQRQLSVLSNIELSTATSSGLPLREVLKN 261
+ C H F +CL + +++PARR+ L L RQ +VL++ + T + + +L+
Sbjct: 29 MLDCCHSFCVECLAH--LSLVTPARRRLLCPLCRQPTVLASGQPVTDLPTDTAMLTLLRL 86
Query: 262 EIDDIV 279
E ++
Sbjct: 87 EPHHVI 92
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 71,219,196
Number of Sequences: 237096
Number of extensions: 1313328
Number of successful extensions: 4467
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 3917
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4424
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6354183230
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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