Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0013_L05
         (602 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    21   7.0  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    21   7.0  
DQ855485-1|ABH88172.1|  128|Apis mellifera chemosensory protein ...    21   9.3  
AJ973400-1|CAJ01447.1|  128|Apis mellifera hypothetical protein ...    21   9.3  

>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 21.4 bits (43), Expect = 7.0
 Identities = 8/34 (23%), Positives = 20/34 (58%)
 Frame = +1

Query: 175 LQRQLSVLSNIELSTATSSGLPLREVLKNEIDDI 276
           L  +  ++ N++ +    S LP+ ++ K++ +DI
Sbjct: 76  LDLEYELVENLQANEKPWSTLPIEDLTKSDNEDI 109


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 21.4 bits (43), Expect = 7.0
 Identities = 8/34 (23%), Positives = 20/34 (58%)
 Frame = +1

Query: 175 LQRQLSVLSNIELSTATSSGLPLREVLKNEIDDI 276
           L  +  ++ N++ +    S LP+ ++ K++ +DI
Sbjct: 114 LDLEYELVENLQANEKPWSTLPIEDLTKSDNEDI 147


>DQ855485-1|ABH88172.1|  128|Apis mellifera chemosensory protein 4
           protein.
          Length = 128

 Score = 21.0 bits (42), Expect = 9.3
 Identities = 9/26 (34%), Positives = 12/26 (46%)
 Frame = +1

Query: 253 LKNEIDDIVASECIFCGEHMITCIDK 330
           LK  + D + +EC  C E      DK
Sbjct: 63  LKRNLPDALENECSPCSEKQKKIADK 88


>AJ973400-1|CAJ01447.1|  128|Apis mellifera hypothetical protein
           protein.
          Length = 128

 Score = 21.0 bits (42), Expect = 9.3
 Identities = 9/26 (34%), Positives = 12/26 (46%)
 Frame = +1

Query: 253 LKNEIDDIVASECIFCGEHMITCIDK 330
           LK  + D + +EC  C E      DK
Sbjct: 63  LKRNLPDALENECSPCSEKQKKIADK 88


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 141,722
Number of Sequences: 438
Number of extensions: 2742
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17726685
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)