Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0013_L04
(591 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/T... 25 1.4
AY341235-1|AAR13799.1| 196|Anopheles gambiae transferrin-like p... 25 1.8
AY341234-1|AAR13798.1| 196|Anopheles gambiae transferrin-like p... 25 1.8
AY341233-1|AAR13797.1| 196|Anopheles gambiae transferrin-like p... 25 1.8
AY341232-1|AAR13796.1| 196|Anopheles gambiae transferrin-like p... 25 1.8
DQ974170-1|ABJ52810.1| 511|Anopheles gambiae serpin 12 protein. 23 5.6
AY705402-1|AAU12511.1| 509|Anopheles gambiae nicotinic acetylch... 23 5.6
AY705399-1|AAU12508.1| 533|Anopheles gambiae nicotinic acetylch... 23 5.6
AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein. 23 7.4
M93689-1|AAA29368.1| 442|Anopheles gambiae protein ( Anopheles ... 23 9.8
AY705401-1|AAU12510.1| 490|Anopheles gambiae nicotinic acetylch... 23 9.8
AY705400-1|AAU12509.1| 490|Anopheles gambiae nicotinic acetylch... 23 9.8
AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA topoi... 23 9.8
>AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/Thr
phosphatase protein.
Length = 1977
Score = 25.4 bits (53), Expect = 1.4
Identities = 11/32 (34%), Positives = 16/32 (50%)
Frame = +2
Query: 266 RTNKACPLYTGSMAGGPSSPLDTDAEPPSIEP 361
R+ CP T AG P +PL + + S+ P
Sbjct: 785 RSPARCPADTNGDAGTPDNPLSSSSTSSSLYP 816
>AY341235-1|AAR13799.1| 196|Anopheles gambiae transferrin-like
protein.
Length = 196
Score = 25.0 bits (52), Expect = 1.8
Identities = 12/24 (50%), Positives = 14/24 (58%)
Frame = +2
Query: 320 SPLDTDAEPPSIEPEDDDLGYVDG 391
SPL+ DAE P +E D L DG
Sbjct: 157 SPLEDDAEEPPVEGIDPALRQNDG 180
>AY341234-1|AAR13798.1| 196|Anopheles gambiae transferrin-like
protein.
Length = 196
Score = 25.0 bits (52), Expect = 1.8
Identities = 12/24 (50%), Positives = 14/24 (58%)
Frame = +2
Query: 320 SPLDTDAEPPSIEPEDDDLGYVDG 391
SPL+ DAE P +E D L DG
Sbjct: 157 SPLEDDAEEPPVEGIDPALRQNDG 180
>AY341233-1|AAR13797.1| 196|Anopheles gambiae transferrin-like
protein.
Length = 196
Score = 25.0 bits (52), Expect = 1.8
Identities = 12/24 (50%), Positives = 14/24 (58%)
Frame = +2
Query: 320 SPLDTDAEPPSIEPEDDDLGYVDG 391
SPL+ DAE P +E D L DG
Sbjct: 157 SPLEDDAEEPPVEGIDPALRQNDG 180
>AY341232-1|AAR13796.1| 196|Anopheles gambiae transferrin-like
protein.
Length = 196
Score = 25.0 bits (52), Expect = 1.8
Identities = 12/24 (50%), Positives = 14/24 (58%)
Frame = +2
Query: 320 SPLDTDAEPPSIEPEDDDLGYVDG 391
SPL+ DAE P +E D L DG
Sbjct: 157 SPLEDDAEEPPVEGIDPALRQNDG 180
>DQ974170-1|ABJ52810.1| 511|Anopheles gambiae serpin 12 protein.
Length = 511
Score = 23.4 bits (48), Expect = 5.6
Identities = 10/24 (41%), Positives = 13/24 (54%)
Frame = +2
Query: 329 DTDAEPPSIEPEDDDLGYVDGTKL 400
+ D E P + DD YVD TK+
Sbjct: 159 EIDDENPKFDKNIDDKEYVDPTKI 182
>AY705402-1|AAU12511.1| 509|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 7 protein.
Length = 509
Score = 23.4 bits (48), Expect = 5.6
Identities = 12/25 (48%), Positives = 14/25 (56%)
Frame = -1
Query: 219 GFSLARRRDVVWRRSGSCLI*PNGI 145
GF +VV R +GSCL P GI
Sbjct: 102 GFDGTYPTNVVVRNNGSCLYVPPGI 126
>AY705399-1|AAU12508.1| 533|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 5 protein.
Length = 533
Score = 23.4 bits (48), Expect = 5.6
Identities = 12/25 (48%), Positives = 14/25 (56%)
Frame = -1
Query: 219 GFSLARRRDVVWRRSGSCLI*PNGI 145
GF +VV R +GSCL P GI
Sbjct: 134 GFDGTYPTNVVVRNNGSCLYVPPGI 158
>AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.
Length = 2259
Score = 23.0 bits (47), Expect = 7.4
Identities = 13/42 (30%), Positives = 20/42 (47%), Gaps = 2/42 (4%)
Frame = +2
Query: 251 QVGHMRTNKACPLYTGSMAGGPSSP--LDTDAEPPSIEPEDD 370
Q+ ++ ++ PL + G S+ DTD EP E DD
Sbjct: 261 QIAFLKQHRYEPLAVYGLDGNDSASDKPDTDGEPEKDEENDD 302
>M93689-1|AAA29368.1| 442|Anopheles gambiae protein ( Anopheles
gambiae T1 retroposon. ).
Length = 442
Score = 22.6 bits (46), Expect = 9.8
Identities = 8/11 (72%), Positives = 9/11 (81%)
Frame = -1
Query: 198 RDVVWRRSGSC 166
RD+VW RS SC
Sbjct: 14 RDIVWLRSCSC 24
>AY705401-1|AAU12510.1| 490|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 6 protein.
Length = 490
Score = 22.6 bits (46), Expect = 9.8
Identities = 10/25 (40%), Positives = 14/25 (56%)
Frame = -1
Query: 219 GFSLARRRDVVWRRSGSCLI*PNGI 145
GF ++V + +GSCL P GI
Sbjct: 119 GFDGTYHTNIVVKNNGSCLYVPPGI 143
>AY705400-1|AAU12509.1| 490|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 6 protein.
Length = 490
Score = 22.6 bits (46), Expect = 9.8
Identities = 10/25 (40%), Positives = 14/25 (56%)
Frame = -1
Query: 219 GFSLARRRDVVWRRSGSCLI*PNGI 145
GF ++V + +GSCL P GI
Sbjct: 119 GFDGTYHTNIVVKNNGSCLYVPPGI 143
>AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA
topoisomerase protein.
Length = 1039
Score = 22.6 bits (46), Expect = 9.8
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = -2
Query: 155 LTVSNPGMAKINPSSMTSCSSY 90
L + GM K+ PSS +S SSY
Sbjct: 858 LITATGGMLKMPPSSNSSPSSY 879
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 510,069
Number of Sequences: 2352
Number of extensions: 8741
Number of successful extensions: 67
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 67
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 67
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 56768445
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -