Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0013_L03
         (585 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.           28   0.26 
AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA topoi...    25   1.4  
M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles ...    23   5.5  
AY070256-1|AAL59655.1|  227|Anopheles gambiae glutathione S-tran...    23   7.3  
AJ439398-7|CAD28130.1| 1344|Anopheles gambiae putative 5-oxoprol...    23   7.3  
AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein.           23   7.3  
X95912-1|CAA65156.1|  696|Anopheles gambiae immune factor protein.     23   9.6  

>CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.
          Length = 1664

 Score = 27.9 bits (59), Expect = 0.26
 Identities = 12/29 (41%), Positives = 17/29 (58%)
 Frame = +2

Query: 128  YCAGMDQNGMGMSQANGSGGYNDRQRNHR 214
            + +G D  G G S   G GG+ DR+ NH+
Sbjct: 1263 HSSGKDPTGAGSSSGKG-GGFFDRKSNHQ 1290


>AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA
           topoisomerase protein.
          Length = 1039

 Score = 25.4 bits (53), Expect = 1.4
 Identities = 16/68 (23%), Positives = 23/68 (33%), Gaps = 1/68 (1%)
 Frame = +2

Query: 8   GPKNNRRNNYSDEPNEHYNNGPRKN-NAEYYGQQNMGPGRPYCAGMDQNGMGMSQANGSG 184
           G  NN  +N S   N H ++    N      G+   G G   C      G G     G  
Sbjct: 154 GSNNNNNSNSSSSCNNHVSSNTNNNGTTNGGGELTTGGGTNGCTKAGGGGGGTGTGGGLV 213

Query: 185 GYNDRQRN 208
             +++  N
Sbjct: 214 SSSEKNYN 221


>M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles
           gambiae T1 retroposon. ).
          Length = 975

 Score = 23.4 bits (48), Expect = 5.5
 Identities = 11/28 (39%), Positives = 14/28 (50%)
 Frame = -2

Query: 191 CTPRSRSPATYPFRSGPCRHSTADRDPY 108
           CTP  RSP   P+ +   R+   DR  Y
Sbjct: 323 CTPIFRSPPNPPWSNRTLRNLKKDRMKY 350


>AY070256-1|AAL59655.1|  227|Anopheles gambiae glutathione
           S-transferase E6 protein.
          Length = 227

 Score = 23.0 bits (47), Expect = 7.3
 Identities = 10/35 (28%), Positives = 17/35 (48%)
 Frame = -3

Query: 280 QLFNVSYVAANHRCVHSLGCSQSVIPLAVIVPPGA 176
           ++    YVA +   +  L C  SV  L +++ P A
Sbjct: 144 RMLQSEYVAGDQLTIADLSCVSSVATLHLMLKPSA 178


>AJ439398-7|CAD28130.1| 1344|Anopheles gambiae putative 5-oxoprolinase
            protein.
          Length = 1344

 Score = 23.0 bits (47), Expect = 7.3
 Identities = 10/27 (37%), Positives = 18/27 (66%), Gaps = 3/27 (11%)
 Frame = -3

Query: 244  RCV--HSLGCSQSVI-PLAVIVPPGAV 173
            RC+  H +  +Q  + P+ VI+PPG++
Sbjct: 1070 RCMVGHDVPLNQGCLAPIEVIIPPGSI 1096


>AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein.
          Length = 1459

 Score = 23.0 bits (47), Expect = 7.3
 Identities = 9/35 (25%), Positives = 19/35 (54%)
 Frame = -3

Query: 271 NVSYVAANHRCVHSLGCSQSVIPLAVIVPPGAVRL 167
           N S + A H    S+ C+++++  + ++P   V L
Sbjct: 82  NFSVIPAEHTAALSILCNEAIMARSKLLPNSFVHL 116


>X95912-1|CAA65156.1|  696|Anopheles gambiae immune factor protein.
          Length = 696

 Score = 22.6 bits (46), Expect = 9.6
 Identities = 10/25 (40%), Positives = 13/25 (52%)
 Frame = +2

Query: 113 GPGRPYCAGMDQNGMGMSQANGSGG 187
           GP  P   GM  N   +SQ + +GG
Sbjct: 358 GPSPPSSLGMPGNIPNLSQLDATGG 382


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 609,657
Number of Sequences: 2352
Number of extensions: 13174
Number of successful extensions: 31
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 55927431
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)