Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0013_L02
         (318 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY939827-1|AAY18208.1|  680|Anopheles gambiae CTCF-like protein ...    22   6.4  
AY994089-1|AAX86002.1|  267|Anopheles gambiae hyp37.7-like precu...    21   8.4  
AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal...    21   8.4  

>AY939827-1|AAY18208.1|  680|Anopheles gambiae CTCF-like protein
           protein.
          Length = 680

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = +2

Query: 227 VACNRCWSRCSDRCSFKL 280
           + C RC S   DR S+K+
Sbjct: 327 IKCKRCDSTFPDRYSYKM 344


>AY994089-1|AAX86002.1|  267|Anopheles gambiae hyp37.7-like
           precursor protein.
          Length = 267

 Score = 21.4 bits (43), Expect = 8.4
 Identities = 9/23 (39%), Positives = 15/23 (65%)
 Frame = +1

Query: 115 TSTESGLSEADSNGVTNGSNEDS 183
           +S+   LS+ D  G  NG+N+D+
Sbjct: 152 SSSLKELSKIDFTGFYNGTNKDT 174


>AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal
           growth factor receptorprotein.
          Length = 1433

 Score = 21.4 bits (43), Expect = 8.4
 Identities = 7/22 (31%), Positives = 13/22 (59%)
 Frame = +2

Query: 206 VRRKQNYVACNRCWSRCSDRCS 271
           V++ +N   C+     CS++CS
Sbjct: 456 VQKNRNATECHEEGMECSEQCS 477


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.310    0.122    0.328 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 231,975
Number of Sequences: 2352
Number of extensions: 3080
Number of successful extensions: 5
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 563,979
effective HSP length: 56
effective length of database: 432,267
effective search space used: 21181083
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)