Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0013_L01
(531 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U40948-5|AAA81731.2| 955|Caenorhabditis elegans Hypothetical pr... 139 1e-33
Z75954-6|CAJ55257.1| 1145|Caenorhabditis elegans Hypothetical pr... 77 1e-14
Z75954-5|CAB00104.1| 1143|Caenorhabditis elegans Hypothetical pr... 77 1e-14
U97015-6|AAB52345.2| 1064|Caenorhabditis elegans Hypothetical pr... 66 1e-11
Z80215-6|CAD56562.2| 1052|Caenorhabditis elegans Hypothetical pr... 29 2.1
Z80215-5|CAB02273.3| 1049|Caenorhabditis elegans Hypothetical pr... 29 2.1
Z95559-3|CAB08998.1| 786|Caenorhabditis elegans Hypothetical pr... 27 6.3
Z50006-2|CAD44148.1| 523|Caenorhabditis elegans Hypothetical pr... 27 6.3
U41035-2|AAM69088.1| 1371|Caenorhabditis elegans Uncoordinated p... 27 6.3
U41035-1|AAB37028.2| 1563|Caenorhabditis elegans Uncoordinated p... 27 6.3
U29244-14|AAC71095.1| 774|Caenorhabditis elegans Fzo (fzo mitoc... 27 6.3
AF257062-1|AAK49331.1| 1563|Caenorhabditis elegans Rab3-interact... 27 6.3
Z70754-2|CAC42308.1| 764|Caenorhabditis elegans Hypothetical pr... 27 8.4
Z70754-1|CAA94771.2| 966|Caenorhabditis elegans Hypothetical pr... 27 8.4
Z50857-5|CAJ43436.1| 719|Caenorhabditis elegans Hypothetical pr... 27 8.4
Z50857-4|CAC42283.1| 694|Caenorhabditis elegans Hypothetical pr... 27 8.4
Z50857-3|CAC42284.1| 753|Caenorhabditis elegans Hypothetical pr... 27 8.4
AF164113-1|AAD45535.1| 810|Caenorhabditis elegans zinc finger p... 27 8.4
AF136239-1|AAD34463.1| 694|Caenorhabditis elegans DAF-12 A2 pro... 27 8.4
AF136238-1|AAD34462.1| 753|Caenorhabditis elegans DAF-12 A1 pro... 27 8.4
AC024808-2|AAK29926.1| 229|Caenorhabditis elegans Hypothetical ... 27 8.4
>U40948-5|AAA81731.2| 955|Caenorhabditis elegans Hypothetical
protein F55D10.1 protein.
Length = 955
Score = 139 bits (336), Expect = 1e-33
Identities = 74/172 (43%), Positives = 98/172 (56%), Gaps = 1/172 (0%)
Frame = +2
Query: 17 QMNFMYSTPTCYLKAVRDADPVLPTKQDDFFPYASDPTAYWTGYFTSRPTTKYFEREANN 196
++ +YSTP CY KAV+ P L K DDFFPYAS +YWTGYFTSRP K R+A+
Sbjct: 318 KVRVIYSTPACYTKAVQAKTPTLSVKHDDFFPYASGRHSYWTGYFTSRPAFKGMIRQASC 377
Query: 197 YLQVVKQLQVLAGLEKHNVYVLNELRDAMGVMQHHDAITGTEKQHVTHDYERILNQAVDD 376
LQ+ KQL V+A L + + LR+A ++QHHDA+TGT K++VT DYE+ L + V +
Sbjct: 378 MLQLAKQLDVIANLGPEDDSDIEILREASALVQHHDAVTGTAKENVTRDYEKQLAKGVSE 437
Query: 377 ALIISQQAFNKMK-QGKSSKQPLFNYDRCHFNESSCLTAETSDNFIVTIYNS 529
++ KM G K L NE+ C S F V I+NS
Sbjct: 438 VEVVINDFMKKMNPDGLDPKLVLCPL----INETICKPINGSSEFSVVIFNS 485
>Z75954-6|CAJ55257.1| 1145|Caenorhabditis elegans Hypothetical
protein F58H1.1b protein.
Length = 1145
Score = 76.6 bits (180), Expect = 1e-14
Identities = 41/111 (36%), Positives = 60/111 (54%), Gaps = 6/111 (5%)
Frame = +2
Query: 59 AVRDADPVLPTKQDDFFPYASDPTAYWTGYFTSRPTTKYFEREANNYLQVVKQLQVLAGL 238
A+ + LPT DFF YA YW+GYFTSRP K +R +YL+ + LA +
Sbjct: 491 AISASGEQLPTFSGDFFTYADRDDHYWSGYFTSRPFYKQLDRVLQHYLRSAEIAFTLANI 550
Query: 239 EKHNVY---VLNEL---RDAMGVMQHHDAITGTEKQHVTHDYERILNQAVD 373
E+ + + +L R A+ + QHHD +TGT K HV DY + + A++
Sbjct: 551 EEEGMVEAKIFEKLVTARRALSLFQHHDGVTGTAKDHVVLDYGQKMIDALN 601
>Z75954-5|CAB00104.1| 1143|Caenorhabditis elegans Hypothetical
protein F58H1.1a protein.
Length = 1143
Score = 76.6 bits (180), Expect = 1e-14
Identities = 41/111 (36%), Positives = 60/111 (54%), Gaps = 6/111 (5%)
Frame = +2
Query: 59 AVRDADPVLPTKQDDFFPYASDPTAYWTGYFTSRPTTKYFEREANNYLQVVKQLQVLAGL 238
A+ + LPT DFF YA YW+GYFTSRP K +R +YL+ + LA +
Sbjct: 489 AISASGEQLPTFSGDFFTYADRDDHYWSGYFTSRPFYKQLDRVLQHYLRSAEIAFTLANI 548
Query: 239 EKHNVY---VLNEL---RDAMGVMQHHDAITGTEKQHVTHDYERILNQAVD 373
E+ + + +L R A+ + QHHD +TGT K HV DY + + A++
Sbjct: 549 EEEGMVEAKIFEKLVTARRALSLFQHHDGVTGTAKDHVVLDYGQKMIDALN 599
>U97015-6|AAB52345.2| 1064|Caenorhabditis elegans Hypothetical
protein F48C1.1 protein.
Length = 1064
Score = 66.1 bits (154), Expect = 1e-11
Identities = 40/114 (35%), Positives = 60/114 (52%), Gaps = 6/114 (5%)
Frame = +2
Query: 65 RDADPVLPTKQDDFFPYASDPTAYWTGYFTSRPTTKYFEREANNYLQ----VVKQLQVLA 232
+D++P PT DFFPY YWTGY+T+RP K R ++ ++ ++ L+V
Sbjct: 444 KDSEP--PTVSGDFFPYMCALGDYWTGYYTTRPFFKRQGRLLHSLIRNGDIMLSMLRVNL 501
Query: 233 GLEK--HNVYVLNELRDAMGVMQHHDAITGTEKQHVTHDYERILNQAVDDALII 388
K NV L R + + QHHDAITGT K V +Y +L+ ++ I+
Sbjct: 502 KQRKIGENVKRLEAARRNLALFQHHDAITGTSKVSVMDNYSELLHASIVSTNIV 555
>Z80215-6|CAD56562.2| 1052|Caenorhabditis elegans Hypothetical
protein C36B1.8b protein.
Length = 1052
Score = 29.1 bits (62), Expect = 2.1
Identities = 24/89 (26%), Positives = 42/89 (47%), Gaps = 6/89 (6%)
Frame = +2
Query: 77 PVLPTKQDDFFPYASDPTAY-WTGYFTSRPTTKYFEREANNYLQVV---KQLQVLAGL-- 238
P +P + + F D T+Y +T T + + ++Y+Q V ++ Q+L +
Sbjct: 543 PPVPQEPELFLKSVLDLTSYIYTLMAVCSSTNRKSAAKISDYVQNVILREKSQILERIPD 602
Query: 239 EKHNVYVLNELRDAMGVMQHHDAITGTEK 325
E + VL E+ + M HH AIT +K
Sbjct: 603 ELDKITVLQEIGKIVAAMTHHPAITLDDK 631
>Z80215-5|CAB02273.3| 1049|Caenorhabditis elegans Hypothetical
protein C36B1.8a protein.
Length = 1049
Score = 29.1 bits (62), Expect = 2.1
Identities = 24/89 (26%), Positives = 42/89 (47%), Gaps = 6/89 (6%)
Frame = +2
Query: 77 PVLPTKQDDFFPYASDPTAY-WTGYFTSRPTTKYFEREANNYLQVV---KQLQVLAGL-- 238
P +P + + F D T+Y +T T + + ++Y+Q V ++ Q+L +
Sbjct: 543 PPVPQEPELFLKSVLDLTSYIYTLMAVCSSTNRKSAAKISDYVQNVILREKSQILERIPD 602
Query: 239 EKHNVYVLNELRDAMGVMQHHDAITGTEK 325
E + VL E+ + M HH AIT +K
Sbjct: 603 ELDKITVLQEIGKIVAAMTHHPAITLDDK 631
>Z95559-3|CAB08998.1| 786|Caenorhabditis elegans Hypothetical
protein Y41E3.4 protein.
Length = 786
Score = 27.5 bits (58), Expect = 6.3
Identities = 20/74 (27%), Positives = 33/74 (44%)
Frame = +2
Query: 2 HEDGLQMNFMYSTPTCYLKAVRDADPVLPTKQDDFFPYASDPTAYWTGYFTSRPTTKYFE 181
H + +NF Y+ + +R D P K+++ F A + +W GY +R T +
Sbjct: 286 HAKAININFGYAKAMGGVCNLR-FDDTNPEKEEEKFFSAIEDIVHWLGYDPAR-VTHSSD 343
Query: 182 REANNYLQVVKQLQ 223
YL VK +Q
Sbjct: 344 NFQQLYLWAVKLIQ 357
>Z50006-2|CAD44148.1| 523|Caenorhabditis elegans Hypothetical
protein T07C5.1c protein.
Length = 523
Score = 27.5 bits (58), Expect = 6.3
Identities = 16/56 (28%), Positives = 27/56 (48%)
Frame = +2
Query: 53 LKAVRDADPVLPTKQDDFFPYASDPTAYWTGYFTSRPTTKYFEREANNYLQVVKQL 220
L+A +D + LP KQDD+F + + + T P ER + L +++L
Sbjct: 276 LEAGKDENVTLPKKQDDYFKKGKSGSVF-VSFGTVTPFRSLPERIQLSILNAIQKL 330
>U41035-2|AAM69088.1| 1371|Caenorhabditis elegans Uncoordinated
protein 10, isoform b protein.
Length = 1371
Score = 27.5 bits (58), Expect = 6.3
Identities = 19/70 (27%), Positives = 34/70 (48%)
Frame = +3
Query: 300 TTL*QVRRSSM*LMTTRGSSIRPWTTPS*SRNRLSTK*SKGNRANSHCLIMTGVTLMNPV 479
TT+ V R +M T + TP+ + NR+ K +K N S + G + N V
Sbjct: 1240 TTMTTVNRRNMNANNTSNDNTSFAETPTANTNRVPIKETKQNSLASSSSVAGGGSAANNV 1299
Query: 480 V*QRKRVIIS 509
+ +RK+ +++
Sbjct: 1300 MKERKKSLMT 1309
>U41035-1|AAB37028.2| 1563|Caenorhabditis elegans Uncoordinated
protein 10, isoform a protein.
Length = 1563
Score = 27.5 bits (58), Expect = 6.3
Identities = 19/70 (27%), Positives = 34/70 (48%)
Frame = +3
Query: 300 TTL*QVRRSSM*LMTTRGSSIRPWTTPS*SRNRLSTK*SKGNRANSHCLIMTGVTLMNPV 479
TT+ V R +M T + TP+ + NR+ K +K N S + G + N V
Sbjct: 1256 TTMTTVNRRNMNANNTSNDNTSFAETPTANTNRVPIKETKQNSLASSSSVAGGGSAANNV 1315
Query: 480 V*QRKRVIIS 509
+ +RK+ +++
Sbjct: 1316 MKERKKSLMT 1325
>U29244-14|AAC71095.1| 774|Caenorhabditis elegans Fzo (fzo
mitochondrial fusion protein)related protein 1 protein.
Length = 774
Score = 27.5 bits (58), Expect = 6.3
Identities = 23/75 (30%), Positives = 35/75 (46%)
Frame = +2
Query: 218 LQVLAGLEKHNVYVLNELRDAMGVMQHHDAITGTEKQHVTHDYERILNQAVDDALIISQQ 397
L+V L K NV++LN DA + I +KQH+T R VD+ + S++
Sbjct: 254 LRVAKKLSKPNVFILNNRWDASAA--ETENIEDVKKQHLT----RFRQFLVDELEVCSER 307
Query: 398 AFNKMKQGKSSKQPL 442
N SS++ L
Sbjct: 308 EVNDRIFFVSSREVL 322
>AF257062-1|AAK49331.1| 1563|Caenorhabditis elegans Rab3-interacting
molecule UNC-10 protein.
Length = 1563
Score = 27.5 bits (58), Expect = 6.3
Identities = 19/70 (27%), Positives = 34/70 (48%)
Frame = +3
Query: 300 TTL*QVRRSSM*LMTTRGSSIRPWTTPS*SRNRLSTK*SKGNRANSHCLIMTGVTLMNPV 479
TT+ V R +M T + TP+ + NR+ K +K N S + G + N V
Sbjct: 1256 TTMTTVNRRNMNANNTSNDNTSFAETPTANTNRVPIKETKQNSLASSSSVAGGGSAANNV 1315
Query: 480 V*QRKRVIIS 509
+ +RK+ +++
Sbjct: 1316 MKERKKSLMT 1325
>Z70754-2|CAC42308.1| 764|Caenorhabditis elegans Hypothetical
protein F58E6.1b protein.
Length = 764
Score = 27.1 bits (57), Expect = 8.4
Identities = 12/36 (33%), Positives = 22/36 (61%), Gaps = 2/36 (5%)
Frame = +1
Query: 55 ESCEGRRSRPSYKTGRFLPVRE--RPDCVLDRIFHV 156
++CE +S + +F P+++ +P C L+ IFHV
Sbjct: 90 KTCEICKSEYTNSGAQFKPIKQWSKPKCSLNNIFHV 125
>Z70754-1|CAA94771.2| 966|Caenorhabditis elegans Hypothetical
protein F58E6.1a protein.
Length = 966
Score = 27.1 bits (57), Expect = 8.4
Identities = 12/36 (33%), Positives = 22/36 (61%), Gaps = 2/36 (5%)
Frame = +1
Query: 55 ESCEGRRSRPSYKTGRFLPVRE--RPDCVLDRIFHV 156
++CE +S + +F P+++ +P C L+ IFHV
Sbjct: 90 KTCEICKSEYTNSGAQFKPIKQWSKPKCSLNNIFHV 125
>Z50857-5|CAJ43436.1| 719|Caenorhabditis elegans Hypothetical
protein F11A1.3d protein.
Length = 719
Score = 27.1 bits (57), Expect = 8.4
Identities = 9/20 (45%), Positives = 14/20 (70%)
Frame = +2
Query: 281 MGVMQHHDAITGTEKQHVTH 340
M + +H+ +GTEK H+TH
Sbjct: 360 MSLSRHNSTSSGTEKNHMTH 379
>Z50857-4|CAC42283.1| 694|Caenorhabditis elegans Hypothetical
protein F11A1.3b protein.
Length = 694
Score = 27.1 bits (57), Expect = 8.4
Identities = 9/20 (45%), Positives = 14/20 (70%)
Frame = +2
Query: 281 MGVMQHHDAITGTEKQHVTH 340
M + +H+ +GTEK H+TH
Sbjct: 335 MSLSRHNSTSSGTEKNHMTH 354
>Z50857-3|CAC42284.1| 753|Caenorhabditis elegans Hypothetical
protein F11A1.3a protein.
Length = 753
Score = 27.1 bits (57), Expect = 8.4
Identities = 9/20 (45%), Positives = 14/20 (70%)
Frame = +2
Query: 281 MGVMQHHDAITGTEKQHVTH 340
M + +H+ +GTEK H+TH
Sbjct: 394 MSLSRHNSTSSGTEKNHMTH 413
>AF164113-1|AAD45535.1| 810|Caenorhabditis elegans zinc finger
protein STAT-B protein.
Length = 810
Score = 27.1 bits (57), Expect = 8.4
Identities = 12/36 (33%), Positives = 22/36 (61%), Gaps = 2/36 (5%)
Frame = +1
Query: 55 ESCEGRRSRPSYKTGRFLPVRE--RPDCVLDRIFHV 156
++CE +S + +F P+++ +P C L+ IFHV
Sbjct: 136 KTCEICKSEYTNSGAQFKPIKQWSKPKCSLNNIFHV 171
>AF136239-1|AAD34463.1| 694|Caenorhabditis elegans DAF-12 A2
protein.
Length = 694
Score = 27.1 bits (57), Expect = 8.4
Identities = 9/20 (45%), Positives = 14/20 (70%)
Frame = +2
Query: 281 MGVMQHHDAITGTEKQHVTH 340
M + +H+ +GTEK H+TH
Sbjct: 335 MSLSRHNSTSSGTEKNHMTH 354
>AF136238-1|AAD34462.1| 753|Caenorhabditis elegans DAF-12 A1
protein.
Length = 753
Score = 27.1 bits (57), Expect = 8.4
Identities = 9/20 (45%), Positives = 14/20 (70%)
Frame = +2
Query: 281 MGVMQHHDAITGTEKQHVTH 340
M + +H+ +GTEK H+TH
Sbjct: 394 MSLSRHNSTSSGTEKNHMTH 413
>AC024808-2|AAK29926.1| 229|Caenorhabditis elegans Hypothetical
protein Y53G8AM.5 protein.
Length = 229
Score = 27.1 bits (57), Expect = 8.4
Identities = 12/32 (37%), Positives = 15/32 (46%)
Frame = -1
Query: 312 VIASWCCITPIASLSSFKTYTLCFSKPASTCN 217
VI W C+ S S+K T F+ ST N
Sbjct: 148 VINHWSCLKDFPSSDSYKACTQTFNSAVSTSN 179
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,698,409
Number of Sequences: 27780
Number of extensions: 236010
Number of successful extensions: 657
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 639
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 653
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1049512662
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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