Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0013_K23
(573 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U70849-3|AAK67232.1| 166|Caenorhabditis elegans Ubiquitin conju... 287 4e-78
AF106565-1|AAC97374.1| 166|Caenorhabditis elegans ubiquitin-con... 287 4e-78
U08139-1|AAA83388.1| 192|Caenorhabditis elegans ubc-1 protein. 116 1e-26
AF045638-8|AAC02561.2| 192|Caenorhabditis elegans Ubiquitin con... 116 1e-26
AL110500-10|CAB60431.1| 170|Caenorhabditis elegans Hypothetical... 103 7e-23
U13644-3|AAB52677.1| 230|Caenorhabditis elegans Ubiquitin e2 (c... 100 6e-22
Z68337-1|CAA92745.1| 147|Caenorhabditis elegans Hypothetical pr... 92 2e-19
S56051-1|AAB25489.2| 147|Caenorhabditis elegans ubiquitin-conju... 92 2e-19
Z22179-13|CAA80166.1| 164|Caenorhabditis elegans Hypothetical p... 87 6e-18
AC025726-12|AAK73914.3| 243|Caenorhabditis elegans Ubiquitin co... 87 8e-18
AC024817-43|AAK93865.2| 151|Caenorhabditis elegans Ubiquitin co... 83 1e-16
U00035-7|AAA50648.2| 153|Caenorhabditis elegans Ubiquitin conju... 76 2e-14
AL032653-6|CAA21716.1| 152|Caenorhabditis elegans Hypothetical ... 75 5e-14
AF099919-11|AAC68796.1| 199|Caenorhabditis elegans Ubiquitin co... 72 3e-13
AC024876-5|AAF60891.2| 221|Caenorhabditis elegans Ubiquitin con... 66 2e-11
Z66520-3|CAA91389.2| 160|Caenorhabditis elegans Hypothetical pr... 64 5e-11
U41026-5|AAA82352.2| 546|Caenorhabditis elegans Ubiquitin conju... 63 1e-10
U39674-5|AAA80415.2| 229|Caenorhabditis elegans Ubiquitin conju... 60 1e-09
AC024747-1|AAO21404.1| 203|Caenorhabditis elegans Ubiquitin con... 60 1e-09
U40411-1|AAC47063.2| 679|Caenorhabditis elegans Ubiquitin conju... 59 3e-09
Z81108-2|CAB03238.1| 180|Caenorhabditis elegans Hypothetical pr... 58 4e-09
AC024748-1|AAF60411.2| 218|Caenorhabditis elegans Ubiquitin con... 58 4e-09
U23517-9|AAB93334.2| 314|Caenorhabditis elegans Ubiquitin conju... 50 1e-06
Z92834-2|CAB07383.1| 139|Caenorhabditis elegans Hypothetical pr... 43 2e-04
U39674-4|AAA80414.2| 182|Caenorhabditis elegans Ubiquitin conju... 36 0.020
Z80344-8|CAB02490.2| 2268|Caenorhabditis elegans Hypothetical pr... 29 2.3
AL117203-22|CAB60425.1| 2268|Caenorhabditis elegans Hypothetical... 29 2.3
U42839-3|AAC69014.1| 152|Caenorhabditis elegans Hypothetical pr... 29 3.1
AL021487-10|CAA16357.2| 1592|Caenorhabditis elegans Hypothetical... 28 4.1
AF039052-4|AAF98630.1| 981|Caenorhabditis elegans Proteasome re... 28 4.1
AC006747-5|AAF60510.3| 310|Caenorhabditis elegans Hypothetical ... 28 5.4
Z82081-7|CAB04960.1| 285|Caenorhabditis elegans Hypothetical pr... 27 9.5
Z82081-6|CAB04959.1| 279|Caenorhabditis elegans Hypothetical pr... 27 9.5
Z68750-3|CAA92964.2| 1092|Caenorhabditis elegans Hypothetical pr... 27 9.5
M94671-1|AAB87718.1| 279|Caenorhabditis elegans beta-galactosid... 27 9.5
AF039048-12|AAB94241.2| 296|Caenorhabditis elegans Hypothetical... 27 9.5
AB000802-1|BAA22942.1| 279|Caenorhabditis elegans 32-kDa galect... 27 9.5
>U70849-3|AAK67232.1| 166|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein9 protein.
Length = 166
Score = 287 bits (704), Expect = 4e-78
Identities = 121/157 (77%), Positives = 141/157 (89%)
Frame = +1
Query: 88 MSGIATARLAEERKAWRKDHPFGFVARPMKNPDGSLNLMTWECAIPGKKGTAWEGGLYKL 267
MSGIA RLAEERK WRKDHPFGF+A+P+KN DG+LNL WECAIPG+K T WEGGLY++
Sbjct: 1 MSGIAAGRLAEERKHWRKDHPFGFIAKPVKNADGTLNLFNWECAIPGRKDTIWEGGLYRI 60
Query: 268 RMIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSLLDEEKDWRPAITIKQILLGIQDLL 447
RM+FKDD+PS+PPKCKFEPPLFHPNVYPSGTVCLSLLDE KDW+P+I+IKQ+L+GIQDLL
Sbjct: 61 RMLFKDDFPSTPPKCKFEPPLFHPNVYPSGTVCLSLLDENKDWKPSISIKQLLIGIQDLL 120
Query: 448 NEPNVKDPAQAEAYTIYCQNRLEYDKRVRAQARAMAA 558
N PN++DPAQAEAY IYCQNR EY+KRV+ +A AA
Sbjct: 121 NHPNIEDPAQAEAYQIYCQNRAEYEKRVKKEAVKYAA 157
>AF106565-1|AAC97374.1| 166|Caenorhabditis elegans
ubiquitin-conjugating enzyme 9homolog protein.
Length = 166
Score = 287 bits (704), Expect = 4e-78
Identities = 121/157 (77%), Positives = 141/157 (89%)
Frame = +1
Query: 88 MSGIATARLAEERKAWRKDHPFGFVARPMKNPDGSLNLMTWECAIPGKKGTAWEGGLYKL 267
MSGIA RLAEERK WRKDHPFGF+A+P+KN DG+LNL WECAIPG+K T WEGGLY++
Sbjct: 1 MSGIAAGRLAEERKHWRKDHPFGFIAKPVKNADGTLNLFNWECAIPGRKDTIWEGGLYRI 60
Query: 268 RMIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSLLDEEKDWRPAITIKQILLGIQDLL 447
RM+FKDD+PS+PPKCKFEPPLFHPNVYPSGTVCLSLLDE KDW+P+I+IKQ+L+GIQDLL
Sbjct: 61 RMLFKDDFPSTPPKCKFEPPLFHPNVYPSGTVCLSLLDENKDWKPSISIKQLLIGIQDLL 120
Query: 448 NEPNVKDPAQAEAYTIYCQNRLEYDKRVRAQARAMAA 558
N PN++DPAQAEAY IYCQNR EY+KRV+ +A AA
Sbjct: 121 NHPNIEDPAQAEAYQIYCQNRAEYEKRVKKEAVKYAA 157
>U08139-1|AAA83388.1| 192|Caenorhabditis elegans ubc-1 protein.
Length = 192
Score = 116 bits (279), Expect = 1e-26
Identities = 57/142 (40%), Positives = 83/142 (58%)
Frame = +1
Query: 109 RLAEERKAWRKDHPFGFVARPMKNPDGSLNLMTWECAIPGKKGTAWEGGLYKLRMIFKDD 288
RL + K ++D P G P ++ N++TWE I G + T +E G +KL + F ++
Sbjct: 8 RLMRDFKKLQEDPPAGVSGAPTED-----NILTWEAIIFGPQETPFEDGTFKLSLEFTEE 62
Query: 289 YPSSPPKCKFEPPLFHPNVYPSGTVCLSLLDEEKDWRPAITIKQILLGIQDLLNEPNVKD 468
YP+ PP KF +FHPNVY G++CL +L + W P + IL IQ LL+EPN
Sbjct: 63 YPNKPPTVKFISKMFHPNVYADGSICLDIL--QNRWSPTYDVAAILTSIQSLLDEPNPNS 120
Query: 469 PAQAEAYTIYCQNRLEYDKRVR 534
PA + A +Y +NR EY+KRV+
Sbjct: 121 PANSLAAQLYQENRREYEKRVQ 142
>AF045638-8|AAC02561.2| 192|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein1 protein.
Length = 192
Score = 116 bits (279), Expect = 1e-26
Identities = 57/142 (40%), Positives = 83/142 (58%)
Frame = +1
Query: 109 RLAEERKAWRKDHPFGFVARPMKNPDGSLNLMTWECAIPGKKGTAWEGGLYKLRMIFKDD 288
RL + K ++D P G P ++ N++TWE I G + T +E G +KL + F ++
Sbjct: 8 RLMRDFKKLQEDPPAGVSGAPTED-----NILTWEAIIFGPQETPFEDGTFKLSLEFTEE 62
Query: 289 YPSSPPKCKFEPPLFHPNVYPSGTVCLSLLDEEKDWRPAITIKQILLGIQDLLNEPNVKD 468
YP+ PP KF +FHPNVY G++CL +L + W P + IL IQ LL+EPN
Sbjct: 63 YPNKPPTVKFISKMFHPNVYADGSICLDIL--QNRWSPTYDVAAILTSIQSLLDEPNPNS 120
Query: 469 PAQAEAYTIYCQNRLEYDKRVR 534
PA + A +Y +NR EY+KRV+
Sbjct: 121 PANSLAAQLYQENRREYEKRVQ 142
>AL110500-10|CAB60431.1| 170|Caenorhabditis elegans Hypothetical
protein Y87G2A.9 protein.
Length = 170
Score = 103 bits (248), Expect = 7e-23
Identities = 55/157 (35%), Positives = 81/157 (51%), Gaps = 11/157 (7%)
Frame = +1
Query: 88 MSGIATARLAEERKAWRKDHPFGFVARPMKNPDGSLNLMTWECAIPGKKGTAWEGGLYKL 267
M+G A RL E K P G +A P+ N WEC I G + T + G++
Sbjct: 1 MAGYALKRLMTEYKELTTRPPEGIIAAPIDED----NFFEWECLITGPEETCFANGVFPA 56
Query: 268 RMIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSLLDEEKD-----------WRPAITI 414
R+ F DYP SPPK +F +FHPN+Y G VC+S+L D W P +I
Sbjct: 57 RITFPQDYPLSPPKMRFTCGIFHPNIYADGRVCISILHAPGDDPTGYELSNERWSPVQSI 116
Query: 415 KQILLGIQDLLNEPNVKDPAQAEAYTIYCQNRLEYDK 525
++ILL + +L EPN + PA A ++ ++R +++K
Sbjct: 117 EKILLSVVSMLAEPNDESPANVSAAKMWREDRAQFEK 153
>U13644-3|AAB52677.1| 230|Caenorhabditis elegans Ubiquitin e2
(conjugating enzyme)variant protein 2 protein.
Length = 230
Score = 100 bits (240), Expect = 6e-22
Identities = 50/142 (35%), Positives = 82/142 (57%)
Frame = +1
Query: 118 EERKAWRKDHPFGFVARPMKNPDGSLNLMTWECAIPGKKGTAWEGGLYKLRMIFKDDYPS 297
EE+ W + P G+ A+P+ +G+ +W C +PG +G+ WEGG Y++ + F +P
Sbjct: 42 EEKAKWDERTPQGYTAKPISF-EGADIWCSWICTVPGPRGSPWEGGEYEVSVNFHK-WPI 99
Query: 298 SPPKCKFEPPLFHPNVYPSGTVCLSLLDEEKDWRPAITIKQILLGIQDLLNEPNVKDPAQ 477
PP C+F+ PL HPNV G++ L +L++E W ++K++L I +LL P++ A
Sbjct: 100 IPPICEFKTPLHHPNVDLRGSIYLKMLEQE-HWSSETSLKKLLREISNLLATPDLTQAAN 158
Query: 478 AEAYTIYCQNRLEYDKRVRAQA 543
EA+ Y R Y+ + RA A
Sbjct: 159 IEAWMEYENQRENYEAKARAYA 180
>Z68337-1|CAA92745.1| 147|Caenorhabditis elegans Hypothetical
protein M7.1 protein.
Length = 147
Score = 92.3 bits (219), Expect = 2e-19
Identities = 49/146 (33%), Positives = 78/146 (53%)
Frame = +1
Query: 97 IATARLAEERKAWRKDHPFGFVARPMKNPDGSLNLMTWECAIPGKKGTAWEGGLYKLRMI 276
+A R+ +E + +D P A P+ + +L W+ I G + ++GG++ L +
Sbjct: 1 MALKRIQKELQDLGRDPPAQCSAGPVGD-----DLFHWQATIMGPPESPYQGGVFFLTIH 55
Query: 277 FKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSLLDEEKDWRPAITIKQILLGIQDLLNEP 456
F DYP PPK F ++HPN+ +G++CL +L W PA+TI ++LL I LL +P
Sbjct: 56 FPTDYPFKPPKVAFTTRIYHPNINSNGSICLDIL--RSQWSPALTISKVLLSICSLLCDP 113
Query: 457 NVKDPAQAEAYTIYCQNRLEYDKRVR 534
N DP E IY +R Y++ R
Sbjct: 114 NPDDPLVPEIARIYKTDRERYNQLAR 139
>S56051-1|AAB25489.2| 147|Caenorhabditis elegans
ubiquitin-conjugating enzyme protein.
Length = 147
Score = 92.3 bits (219), Expect = 2e-19
Identities = 49/146 (33%), Positives = 78/146 (53%)
Frame = +1
Query: 97 IATARLAEERKAWRKDHPFGFVARPMKNPDGSLNLMTWECAIPGKKGTAWEGGLYKLRMI 276
+A R+ +E + +D P A P+ + +L W+ I G + ++GG++ L +
Sbjct: 1 MALKRIQKELQDLGRDPPAQCSAGPVGD-----DLFHWQATIMGPPESPYQGGVFFLTIH 55
Query: 277 FKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSLLDEEKDWRPAITIKQILLGIQDLLNEP 456
F DYP PPK F ++HPN+ +G++CL +L W PA+TI ++LL I LL +P
Sbjct: 56 FPTDYPFKPPKVAFTTRIYHPNINSNGSICLDIL--RSQWSPALTISKVLLSICSLLCDP 113
Query: 457 NVKDPAQAEAYTIYCQNRLEYDKRVR 534
N DP E IY +R Y++ R
Sbjct: 114 NPDDPLVPEIARIYKTDRERYNQLAR 139
>Z22179-13|CAA80166.1| 164|Caenorhabditis elegans Hypothetical
protein F58A4.10 protein.
Length = 164
Score = 87.4 bits (207), Expect = 6e-18
Identities = 42/123 (34%), Positives = 66/123 (53%), Gaps = 11/123 (8%)
Frame = +1
Query: 196 NLMTWECAIPGKKGTAWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSL 375
++ WE + G T +EGG +K + F DYP PPK KF ++HPN+ G VC+S+
Sbjct: 32 DIYKWEVLVIGPPDTLYEGGFFKAILDFPRDYPQKPPKMKFISEIWHPNIDKEGNVCISI 91
Query: 376 LDE-----------EKDWRPAITIKQILLGIQDLLNEPNVKDPAQAEAYTIYCQNRLEYD 522
L + E+ W P T++ ILL + +L +PN + PA +A + +N E+
Sbjct: 92 LHDPGDDKWGYERPEERWLPVHTVETILLSVISMLTDPNFESPANVDAAKMQRENYAEFK 151
Query: 523 KRV 531
K+V
Sbjct: 152 KKV 154
>AC025726-12|AAK73914.3| 243|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein3 protein.
Length = 243
Score = 87.0 bits (206), Expect = 8e-18
Identities = 42/112 (37%), Positives = 59/112 (52%), Gaps = 11/112 (9%)
Frame = +1
Query: 196 NLMTWECAIPGKKGTAWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSL 375
NL W I G T ++GG +K + F +YP SPP KF ++HPNVY +G +C+S+
Sbjct: 38 NLFVWTVGIYGPPKTLYQGGYFKASIRFPSNYPYSPPSMKFTTKVWHPNVYENGDLCISI 97
Query: 376 LDEEKD-----------WRPAITIKQILLGIQDLLNEPNVKDPAQAEAYTIY 498
L D W P +++ ILL + LLNEPN PA +A +Y
Sbjct: 98 LHSPIDDPQSGELACERWNPTQSVRTILLSVISLLNEPNTSSPANVDASVMY 149
>AC024817-43|AAK93865.2| 151|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein13 protein.
Length = 151
Score = 83.0 bits (196), Expect = 1e-16
Identities = 47/149 (31%), Positives = 76/149 (51%)
Frame = +1
Query: 88 MSGIATARLAEERKAWRKDHPFGFVARPMKNPDGSLNLMTWECAIPGKKGTAWEGGLYKL 267
M+G R+ +E + D G A NPD S N + I G + + GG++KL
Sbjct: 1 MAGQLPRRIIKETQRLLADPVPGISA----NPDES-NARYFHVMIAGPDDSPFAGGVFKL 55
Query: 268 RMIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSLLDEEKDWRPAITIKQILLGIQDLL 447
+ ++YP + PK +F ++HPN+ G +CL +L ++ W PA+ I+ +LL IQ LL
Sbjct: 56 ELFLPEEYPMAAPKVRFMTKIYHPNIDKLGRICLDILKDK--WSPALQIRTVLLSIQALL 113
Query: 448 NEPNVKDPAQAEAYTIYCQNRLEYDKRVR 534
+ PN +DP + + N E K +
Sbjct: 114 SAPNPEDPLATDVAEQWKTNEAEAIKTAK 142
>U00035-7|AAA50648.2| 153|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein18 protein.
Length = 153
Score = 75.8 bits (178), Expect = 2e-14
Identities = 38/121 (31%), Positives = 63/121 (52%), Gaps = 1/121 (0%)
Frame = +1
Query: 196 NLMTWECA-IPGKKGTAWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLS 372
NL+ W IP K+ + G +K+ + F DYP PPK FE ++HPNV G CL
Sbjct: 31 NLLKWTVLLIPDKE--PYNKGAFKVGITFPVDYPFKPPKVAFETKIYHPNVDEEGKFCLP 88
Query: 373 LLDEEKDWRPAITIKQILLGIQDLLNEPNVKDPAQAEAYTIYCQNRLEYDKRVRAQARAM 552
++ E +W+PA +Q+++ + L+NEP P +A+ + ++ ++ K R
Sbjct: 89 IVTAE-NWKPATKTEQVMMALLSLINEPEPSHPIRADVAEEFQKDHKKFMKTAEEHTRKH 147
Query: 553 A 555
A
Sbjct: 148 A 148
>AL032653-6|CAA21716.1| 152|Caenorhabditis elegans Hypothetical
protein Y54E5B.4 protein.
Length = 152
Score = 74.5 bits (175), Expect = 5e-14
Identities = 43/141 (30%), Positives = 71/141 (50%), Gaps = 3/141 (2%)
Frame = +1
Query: 88 MSGIATARLAEERKAWRKDHPFGFVARPMKNPDGSLNLMTWECAIPGKKGTAWEGGLYKL 267
MS AT RL +E + + P G + + N S +L W+ + G +GT + G ++ L
Sbjct: 1 MSDAATRRLMKELAQLKSEAPEGLL---VDNTSTSNDLKQWKIGVVGAEGTLYAGEVFML 57
Query: 268 RMIFKDDYPSSPPKCKF--EPPLFHPNVYPSGTVCLSLLDEEKDWRPAITIKQILLGIQD 441
+ F YP + P+ F E HP++Y +G +CLS+L + DW PA++++ + L I
Sbjct: 58 QFTFGPQYPFNSPEVMFVGETIPAHPHIYSNGHICLSILSD--DWTPALSVQSVCLSILS 115
Query: 442 LL-NEPNVKDPAQAEAYTIYC 501
+L + K P Y C
Sbjct: 116 MLSSSKEKKHPIDDAIYVRTC 136
>AF099919-11|AAC68796.1| 199|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein20 protein.
Length = 199
Score = 72.1 bits (169), Expect = 3e-13
Identities = 36/96 (37%), Positives = 54/96 (56%), Gaps = 1/96 (1%)
Frame = +1
Query: 196 NLMTWECAIPGKKGTAWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNV-YPSGTVCLS 372
NL + I G T + GG++ L + D YP SPP KF ++HPNV +G +CL
Sbjct: 35 NLTEIKGHIRGPPDTPYAGGMFDLDIKIPDQYPFSPPNVKFSTKIWHPNVSSQTGVICLD 94
Query: 373 LLDEEKDWRPAITIKQILLGIQDLLNEPNVKDPAQA 480
+L ++ W ++T++ +LL IQ L+ P KDP A
Sbjct: 95 ILKDQ--WAASLTLRTVLLSIQALMCTPEPKDPQDA 128
>AC024876-5|AAF60891.2| 221|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein8 protein.
Length = 221
Score = 66.1 bits (154), Expect = 2e-11
Identities = 37/113 (32%), Positives = 54/113 (47%), Gaps = 2/113 (1%)
Frame = +1
Query: 226 GKKGTAWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNV-YPSGTVCLSLLDEEKDWRP 402
G K TA+E G++++R+ D YP P F +FHPN+ SGTVCL ++++ W
Sbjct: 41 GPKDTAYENGVWRIRVDMPDKYPFKSPSIGFLNKIFHPNIDEASGTVCLDVINQA--WTA 98
Query: 403 AITIKQIL-LGIQDLLNEPNVKDPAQAEAYTIYCQNRLEYDKRVRAQARAMAA 558
+ I + LL PN DP EA +Y EY + R A+
Sbjct: 99 LYDLTNIFDTFLPQLLTYPNAADPLNGEAARLYIHKPEEYRRTCREYVMRFAS 151
>Z66520-3|CAA91389.2| 160|Caenorhabditis elegans Hypothetical
protein F49E12.4 protein.
Length = 160
Score = 64.5 bits (150), Expect = 5e-11
Identities = 32/99 (32%), Positives = 57/99 (57%), Gaps = 1/99 (1%)
Frame = +1
Query: 235 GTAWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYP-SGTVCLSLLDEEKDWRPAIT 411
G ++ ++ L + +YP PP KF ++HPNV P + +C +L +E +W+P T
Sbjct: 54 GVLYKNMIFTLTLDVNVEYPFKPPYLKFCHNVYHPNVDPVTCELCSPMLLQE-NWKPETT 112
Query: 412 IKQILLGIQDLLNEPNVKDPAQAEAYTIYCQNRLEYDKR 528
++ +LL + LLNEP++ P +A Y N++E+ K+
Sbjct: 113 MEDVLLNLIVLLNEPDLSRPVNIDAAHDYIHNKVEFVKK 151
>U41026-5|AAA82352.2| 546|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein23 protein.
Length = 546
Score = 63.3 bits (147), Expect = 1e-10
Identities = 35/115 (30%), Positives = 59/115 (51%), Gaps = 1/115 (0%)
Frame = +1
Query: 220 IPGKKGTAWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYP-SGTVCLSLLDEEKDW 396
I G + T +EGG+++L + + YP P KF ++HP+V P GT+CL +D W
Sbjct: 385 IKGVEETPYEGGIFELDIKIGESYPFKAPTVKFITKIWHPSVSPFDGTICLHDVDNGV-W 443
Query: 397 RPAITIKQILLGIQDLLNEPNVKDPAQAEAYTIYCQNRLEYDKRVRAQARAMAAT 561
++TI ++L+ IQ ++ N K+P E NR ++K + A +
Sbjct: 444 PVSMTIYKVLIVIQSWMSNFNEKEPIDVEILEQATNNREVFEKTAEFWTKRFAGS 498
>U39674-5|AAA80415.2| 229|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein21 protein.
Length = 229
Score = 59.7 bits (138), Expect = 1e-09
Identities = 34/111 (30%), Positives = 58/111 (52%), Gaps = 16/111 (14%)
Frame = +1
Query: 196 NLMTWECAIPGKKGTAWEGGLYKLRMIFKDDYPSSPPK---------------CKFEPPL 330
NLM + I G +GT + GG +++++ + YP PPK KF +
Sbjct: 49 NLMDIKGFIKGPEGTPYAGGTFEIKVDIPEHYPFEPPKVTEIIFHIRAFEYIQAKFVTRI 108
Query: 331 FHPNV-YPSGTVCLSLLDEEKDWRPAITIKQILLGIQDLLNEPNVKDPAQA 480
+HPN+ +GT+CL +L ++ W ++T++ +LL +Q +L P DP A
Sbjct: 109 WHPNISSQTGTICLDILKDK--WTASLTLRTVLLSLQAMLCSPEPSDPQDA 157
>AC024747-1|AAO21404.1| 203|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein26 protein.
Length = 203
Score = 59.7 bits (138), Expect = 1e-09
Identities = 36/125 (28%), Positives = 62/125 (49%), Gaps = 4/125 (3%)
Frame = +1
Query: 91 SGIATARLAEERKAWRK--DHPFGFV-ARPMKNPDGSLNLMTWECAIPGKKGTAWEGGLY 261
SG++T L +K +++ P F+ A P++ N++ W I G T +EGG+Y
Sbjct: 3 SGVSTVALQRLKKDYQRLLKEPVPFMKAAPLET-----NILEWRYIIIGAPKTPYEGGIY 57
Query: 262 KLRMIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSLLDEEKD-WRPAITIKQILLGIQ 438
+++F D+P PP P + + +CLS+ D D W PA T+ I+ G+
Sbjct: 58 MGKLLFPKDFPFKPPAILMLTP--NGRFQTNTRLCLSISDYHPDTWNPAWTVSTIITGLM 115
Query: 439 DLLNE 453
+N+
Sbjct: 116 SFMND 120
>U40411-1|AAC47063.2| 679|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein17 protein.
Length = 679
Score = 58.8 bits (136), Expect = 3e-09
Identities = 30/88 (34%), Positives = 47/88 (53%), Gaps = 10/88 (11%)
Frame = +1
Query: 220 IPGKKGTAWEGGLYKLRMIFKDDYPSSPPKCKFEPP-----LFHPNVYPSGTVCLSLLD- 381
I G T + GL++ + F YP SPPKC F F+PN+Y G +CLS+L
Sbjct: 449 ISGPDDTPYANGLFEFDIFFPTGYPFSPPKCAFLTTGSGNVRFNPNLYNDGKICLSILGT 508
Query: 382 ----EEKDWRPAITIKQILLGIQDLLNE 453
E+ W P ++ Q+L+ IQ+++ +
Sbjct: 509 WEGRPEEKWNPYCSLMQVLVSIQEVIEK 536
>Z81108-2|CAB03238.1| 180|Caenorhabditis elegans Hypothetical
protein R09B3.4 protein.
Length = 180
Score = 58.0 bits (134), Expect = 4e-09
Identities = 28/102 (27%), Positives = 54/102 (52%), Gaps = 5/102 (4%)
Frame = +1
Query: 244 WEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSLLD----EEKDWRPAIT 411
+ GG ++ ++ +Y + PP K ++HPN+ G++CLS+L ++ WRP
Sbjct: 72 YRGGKFRFKITVPPEYNNVPPVVKCLTKVWHPNINEDGSICLSILRQNSLDQYGWRPTRN 131
Query: 412 IKQILLGIQDLLNE-PNVKDPAQAEAYTIYCQNRLEYDKRVR 534
+ ++ G+ L N+ + D +A ++ QNR ++ RVR
Sbjct: 132 LTDVVHGLVSLFNDLMDFNDALNIQAAQMWSQNRESFNHRVR 173
>AC024748-1|AAF60411.2| 218|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein15 protein.
Length = 218
Score = 58.0 bits (134), Expect = 4e-09
Identities = 37/122 (30%), Positives = 58/122 (47%), Gaps = 1/122 (0%)
Frame = +1
Query: 91 SGIATARLAEERKAWRKDHPFGFVARPMKNPDGSLNLMTWECAIPGKKGTAWEGGLYKLR 270
S A RL ++ +D G A P N D N++ W + G T + GG Y +
Sbjct: 17 SSSAVRRLQKDYAKLMQDPVDGIKALP--NED---NILEWHYCLRGSPDTPFYGGYYWGK 71
Query: 271 MIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSLLD-EEKDWRPAITIKQILLGIQDLL 447
+IFK+++P SPP P + + +CLS+ D + W P T+ IL+G+ +
Sbjct: 72 VIFKENFPWSPPAITMITP--NGRFQTNTRLCLSISDYHPESWNPGWTVSAILIGLHSFM 129
Query: 448 NE 453
NE
Sbjct: 130 NE 131
>U23517-9|AAB93334.2| 314|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein6 protein.
Length = 314
Score = 50.0 bits (114), Expect = 1e-06
Identities = 29/81 (35%), Positives = 40/81 (49%), Gaps = 1/81 (1%)
Frame = +1
Query: 196 NLMTWECAIPGKKGTAWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSL 375
NL W I G GT +EGG+Y R+IF DYP PP P + + VCLS+
Sbjct: 37 NLFEWHFTIRGTLGTDFEGGIYHGRIIFPADYPMKPPNLILLTP--NGRFELNKKVCLSI 94
Query: 376 LD-EEKDWRPAITIKQILLGI 435
+ W P+ +I+ LL +
Sbjct: 95 SGYHPETWLPSWSIRTALLAL 115
>Z92834-2|CAB07383.1| 139|Caenorhabditis elegans Hypothetical
protein F39B2.2 protein.
Length = 139
Score = 42.7 bits (96), Expect = 2e-04
Identities = 33/128 (25%), Positives = 59/128 (46%), Gaps = 3/128 (2%)
Frame = +1
Query: 109 RLAEERKAWRKDHPFGFVARPMKNPDGSLNLMTWECAIPGKKGTAWEGGLYKLRMIFKDD 288
RL EE + +K G ++ +++ D + L W +I G T +E +Y L++ +
Sbjct: 9 RLLEELEEGQKGKGDGNISWGLED-DSDMTLTRWTASIIGPPRTPYESRIYNLQIQCGGN 67
Query: 289 YPSSPPKCKFEPPLFHPNVYPS-GTVCLSLLDEEKDWRPAITIKQILLGIQD--LLNEPN 459
YP PP +F + V S G + L ++W + IK +L I+ ++ + N
Sbjct: 68 YPREPPTVRFTTKVHMVGVNQSNGVIDKRNLTTLRNWSNSYMIKTVLEDIRKNMMMAKEN 127
Query: 460 VKDPAQAE 483
+K AE
Sbjct: 128 LKLQQPAE 135
>U39674-4|AAA80414.2| 182|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein22 protein.
Length = 182
Score = 35.9 bits (79), Expect = 0.020
Identities = 15/45 (33%), Positives = 29/45 (64%)
Frame = +1
Query: 220 IPGKKGTAWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYPS 354
I G T +E G++++ + F D+YP++ P+ KF+ +++ V PS
Sbjct: 35 IAGPADTPYETGVFEVDLTFPDNYPNALPQIKFQTLIWNCAVEPS 79
>Z80344-8|CAB02490.2| 2268|Caenorhabditis elegans Hypothetical protein
F15D4.7 protein.
Length = 2268
Score = 29.1 bits (62), Expect = 2.3
Identities = 13/34 (38%), Positives = 22/34 (64%)
Frame = +1
Query: 202 MTWECAIPGKKGTAWEGGLYKLRMIFKDDYPSSP 303
+TW+ IPGK TAW+ K++ +++DD + P
Sbjct: 1394 VTWKTKIPGKLLTAWK----KIKEMYRDDKITVP 1423
>AL117203-22|CAB60425.1| 2268|Caenorhabditis elegans Hypothetical
protein F15D4.7 protein.
Length = 2268
Score = 29.1 bits (62), Expect = 2.3
Identities = 13/34 (38%), Positives = 22/34 (64%)
Frame = +1
Query: 202 MTWECAIPGKKGTAWEGGLYKLRMIFKDDYPSSP 303
+TW+ IPGK TAW+ K++ +++DD + P
Sbjct: 1394 VTWKTKIPGKLLTAWK----KIKEMYRDDKITVP 1423
>U42839-3|AAC69014.1| 152|Caenorhabditis elegans Hypothetical
protein F11C7.2 protein.
Length = 152
Score = 28.7 bits (61), Expect = 3.1
Identities = 17/49 (34%), Positives = 20/49 (40%), Gaps = 1/49 (2%)
Frame = +3
Query: 99 SDCTFSRREKSLAEGPSLWFRCETNEKSRWIAKSNDLGMCDTW-KKRDC 242
S CT R EK + P E E W A N+ G C T + R C
Sbjct: 52 SGCTGDRLEKEICNCP---LEAEWGEWEEWAACDNECGFCGTHARTRTC 97
>AL021487-10|CAA16357.2| 1592|Caenorhabditis elegans Hypothetical
protein Y45F10B.10 protein.
Length = 1592
Score = 28.3 bits (60), Expect = 4.1
Identities = 17/49 (34%), Positives = 22/49 (44%)
Frame = +1
Query: 349 PSGTVCLSLLDEEKDWRPAITIKQILLGIQDLLNEPNVKDPAQAEAYTI 495
P+ VC S KDW+P T+ + Q +L N DP AY I
Sbjct: 852 PATKVCRSFT--LKDWKPGNTVLTLSANHQYILISGNQSDPGVIYAYHI 898
>AF039052-4|AAF98630.1| 981|Caenorhabditis elegans Proteasome
regulatory particle,non-atpase-like protein 1 protein.
Length = 981
Score = 28.3 bits (60), Expect = 4.1
Identities = 11/32 (34%), Positives = 16/32 (50%)
Frame = +3
Query: 165 ETNEKSRWIAKSNDLGMCDTWKKRDCLGRWTL 260
ET E SRW K+ + GM + + RW +
Sbjct: 379 ETEEASRWFYKNKEYGMLTAAASQGLIWRWDI 410
>AC006747-5|AAF60510.3| 310|Caenorhabditis elegans Hypothetical
protein Y39A3A.3 protein.
Length = 310
Score = 27.9 bits (59), Expect = 5.4
Identities = 14/44 (31%), Positives = 25/44 (56%), Gaps = 2/44 (4%)
Frame = -3
Query: 232 FFQVSHIPRSLDLAIHLDFSL--VSQRNQRDGPSAKLFSLLLNV 107
F + +P+ L+ +FSL ++R+ R+GP+A S LN+
Sbjct: 167 FLECCKLPKVLNFQCKPEFSLNFAAERDNREGPNAVTDSFKLNI 210
>Z82081-7|CAB04960.1| 285|Caenorhabditis elegans Hypothetical
protein W09H1.6b protein.
Length = 285
Score = 27.1 bits (57), Expect = 9.5
Identities = 17/68 (25%), Positives = 32/68 (47%)
Frame = -3
Query: 382 HLGETDTLFLMGTHWGGKEEVQTCTLGDLKDNHL*RSFLIYKVHLPKQSLFFQVSHIPRS 203
HL L+L HWGGK G + +S L++ + K++ F V+ + ++
Sbjct: 135 HLSIDGDLYLNHVHWGGKYYPVPYESGLANGLPVGKSLLVFGT-VEKKAKRFHVNLLRKN 193
Query: 202 LDLAIHLD 179
D++ H +
Sbjct: 194 GDISFHFN 201
>Z82081-6|CAB04959.1| 279|Caenorhabditis elegans Hypothetical
protein W09H1.6a protein.
Length = 279
Score = 27.1 bits (57), Expect = 9.5
Identities = 17/68 (25%), Positives = 32/68 (47%)
Frame = -3
Query: 382 HLGETDTLFLMGTHWGGKEEVQTCTLGDLKDNHL*RSFLIYKVHLPKQSLFFQVSHIPRS 203
HL L+L HWGGK G + +S L++ + K++ F V+ + ++
Sbjct: 129 HLSIDGDLYLNHVHWGGKYYPVPYESGLANGLPVGKSLLVFGT-VEKKAKRFHVNLLRKN 187
Query: 202 LDLAIHLD 179
D++ H +
Sbjct: 188 GDISFHFN 195
>Z68750-3|CAA92964.2| 1092|Caenorhabditis elegans Hypothetical
protein K01A6.2 protein.
Length = 1092
Score = 27.1 bits (57), Expect = 9.5
Identities = 17/72 (23%), Positives = 33/72 (45%)
Frame = +1
Query: 235 GTAWEGGLYKLRMIFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSLLDEEKDWRPAITI 414
G + E G++ IF+ P + P + +CL + DEEKD + I
Sbjct: 4 GFSNESGIFDEFQIFESGKEDIPTRHSLNEPTTKKMTDKTAELCLKIGDEEKD-DFTLEI 62
Query: 415 KQILLGIQDLLN 450
+++ +Q++L+
Sbjct: 63 EKLQATLQEMLD 74
>M94671-1|AAB87718.1| 279|Caenorhabditis elegans beta-galactoside
binding protein protein.
Length = 279
Score = 27.1 bits (57), Expect = 9.5
Identities = 17/68 (25%), Positives = 32/68 (47%)
Frame = -3
Query: 382 HLGETDTLFLMGTHWGGKEEVQTCTLGDLKDNHL*RSFLIYKVHLPKQSLFFQVSHIPRS 203
HL L+L HWGGK G + +S L++ + K++ F V+ + ++
Sbjct: 129 HLSIDGDLYLNHVHWGGKYYPVPYESGLANGLPVGKSLLVFGT-VEKKAKRFHVNLLRKN 187
Query: 202 LDLAIHLD 179
D++ H +
Sbjct: 188 GDISFHFN 195
>AF039048-12|AAB94241.2| 296|Caenorhabditis elegans Hypothetical
protein F16B4.10 protein.
Length = 296
Score = 27.1 bits (57), Expect = 9.5
Identities = 16/44 (36%), Positives = 21/44 (47%)
Frame = -1
Query: 339 GVEKRRFKLALWGT*RIIIFEDHS*FIKSTFPSSPFFSRYRTFP 208
GV KR +LAL I F+ F+ FP+SP + T P
Sbjct: 203 GVTKRANRLALLDAFLIFFFDFVPSFVAHEFPNSPLIAYTTTGP 246
>AB000802-1|BAA22942.1| 279|Caenorhabditis elegans 32-kDa galectin
protein.
Length = 279
Score = 27.1 bits (57), Expect = 9.5
Identities = 17/68 (25%), Positives = 32/68 (47%)
Frame = -3
Query: 382 HLGETDTLFLMGTHWGGKEEVQTCTLGDLKDNHL*RSFLIYKVHLPKQSLFFQVSHIPRS 203
HL L+L HWGGK G + +S L++ + K++ F V+ + ++
Sbjct: 129 HLSIDGDLYLNHVHWGGKYYPVPYESGLANGLPVGKSLLVFGT-VEKKAKRFHVNLLRKN 187
Query: 202 LDLAIHLD 179
D++ H +
Sbjct: 188 GDISFHFN 195
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,830,087
Number of Sequences: 27780
Number of extensions: 311395
Number of successful extensions: 734
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 690
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 717
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1184216096
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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