Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0013_K22
(625 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyce... 31 0.14
SPBPJ4664.04 |||coatomer alpha subunit |Schizosaccharomyces pomb... 31 0.18
SPBC146.11c |mug97|meu33|meiotically upregulated gene Mug97|Schi... 31 0.18
SPAC13G6.03 |gpi7||GPI anchor biosynthesis protein Gpi7 |Schizos... 31 0.18
SPAPYUG7.04c |rpb9||DNA-directed RNA polymerase II complex subun... 29 0.41
SPAC926.04c |hsp90|swo1|heat shock protein Hsp90|Schizosaccharom... 29 0.72
SPAC222.11 |hem13||coproporphyrinogen III oxidase |Schizosacchar... 27 1.7
SPBC83.07 |jmj3||Lid2 complex subunit Jmj3|Schizosaccharomyces p... 27 2.2
SPBP22H7.05c |||ATPase with bromodomain protein|Schizosaccharomy... 27 2.2
SPAP8A3.13c |||Vid 24 family protein|Schizosaccharomyces pombe|c... 26 3.8
SPCC1840.02c |bgs4|orb11, cwg1|1,3-beta-glucan synthase subunit ... 26 3.8
SPBC23G7.04c |nif1||SEL1 repear protein Nif1|Schizosaccharomyces... 26 5.1
SPAC7D4.05 |||hydrolase |Schizosaccharomyces pombe|chr 1|||Manual 26 5.1
SPBC21C3.14c |||sequence orphan|Schizosaccharomyces pombe|chr 2|... 26 5.1
SPAC11D3.14c |||oxoprolinase |Schizosaccharomyces pombe|chr 1|||... 25 6.7
SPAC19D5.01 |pyp2||tyrosine phosphatase Pyp2|Schizosaccharomyces... 25 6.7
SPBC19G7.05c |bgs1|cps1, drc1|1,3-beta-glucan synthase catalytic... 25 6.7
SPAC15A10.16 |bud6|aip3, fat1, SPAC15E1.01|actin interacting pro... 25 6.7
SPAC18B11.06 |||U3 snoRNP-associated protein Lcp5 |Schizosacchar... 25 8.9
SPCC1223.09 |||uricase |Schizosaccharomyces pombe|chr 3|||Manual 25 8.9
SPBC12D12.01 |sad1|SPBC16H5.01c|spindle pole body protein Sad1|S... 25 8.9
SPAC1486.06 |||nicotinate phosphoribosyltransferase |Schizosacch... 25 8.9
>SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1957
Score = 31.1 bits (67), Expect = 0.14
Identities = 29/91 (31%), Positives = 42/91 (46%), Gaps = 5/91 (5%)
Frame = +3
Query: 366 SYQSFLNYEHEIETDQED--SETSMLRNEDDDLSP--ENLVQKNIKHFCNLMKFAHGRNP 533
SYQS N HE+ D + S+ + L + L ENL Q+N+ N+ K H
Sbjct: 788 SYQSISNLYHELRDDHVNMQSQNNTLLESESKLKTDCENLTQQNMTLIDNVQKLMHKHVN 847
Query: 534 PAFPSTVHEKRVDANRVLGLSCAN-KSSLHI 623
S V E + + N L L N +SSL++
Sbjct: 848 Q--ESKVSELK-EVNGKLSLDLKNLRSSLNV 875
>SPBPJ4664.04 |||coatomer alpha subunit |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1207
Score = 30.7 bits (66), Expect = 0.18
Identities = 15/43 (34%), Positives = 24/43 (55%), Gaps = 2/43 (4%)
Frame = -2
Query: 294 HPRRITIEDFHYHSPWLLINAD--LVSIGNVQNRSCDSIYT*H 172
H + + FH+ PW+L +D + I N Q+R+C +I T H
Sbjct: 94 HMDYVRVCTFHHEYPWILSCSDDQTIRIWNWQSRNCIAILTGH 136
>SPBC146.11c |mug97|meu33|meiotically upregulated gene
Mug97|Schizosaccharomyces pombe|chr 2|||Manual
Length = 335
Score = 30.7 bits (66), Expect = 0.18
Identities = 13/32 (40%), Positives = 16/32 (50%)
Frame = -2
Query: 429 TFLNLPGPFLFRAHNSETTDNSNTVRSYHKHF 334
T + LPGP H S +N V YHKH+
Sbjct: 146 TTIGLPGPSALLKHESGKNENQVRVCLYHKHY 177
>SPAC13G6.03 |gpi7||GPI anchor biosynthesis protein Gpi7
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 758
Score = 30.7 bits (66), Expect = 0.18
Identities = 14/46 (30%), Positives = 27/46 (58%)
Frame = +3
Query: 246 AMESGSENPQLLSSLGVLGGCNLKDLPAERNVYDNYEQCLSYQSFL 383
A S ++L ++ +LG C++ L RN+Y NY++ L++ F+
Sbjct: 394 AQSSSYSLDRMLVAISILGACSILSLILFRNLY-NYKELLAFAPFV 438
>SPAPYUG7.04c |rpb9||DNA-directed RNA polymerase II complex subunit
Rpb9 |Schizosaccharomyces pombe|chr 1|||Manual
Length = 113
Score = 29.5 bits (63), Expect = 0.41
Identities = 14/36 (38%), Positives = 22/36 (61%)
Frame = +1
Query: 454 IYHQKISSKKI*NTSVIS*NSHTDETRPRSRQRCTR 561
+Y ++ S + NT+V S ++ TD T PRS + C R
Sbjct: 43 VYRHELQSSNVENTTV-SHDASTDPTLPRSDKECPR 77
>SPAC926.04c |hsp90|swo1|heat shock protein
Hsp90|Schizosaccharomyces pombe|chr 1|||Manual
Length = 704
Score = 28.7 bits (61), Expect = 0.72
Identities = 13/46 (28%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Frame = +3
Query: 333 RNVYDNYEQCLSYQSFLNYEHEIETD-QEDSETSMLRNEDDDLSPE 467
++ + + +SY L E+E + E+ ET ++NE+DD +P+
Sbjct: 192 KDTVKKHSEFISYPIQLVVTREVEKEVPEEEETEEVKNEEDDKAPK 237
>SPAC222.11 |hem13||coproporphyrinogen III oxidase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 312
Score = 27.5 bits (58), Expect = 1.7
Identities = 18/54 (33%), Positives = 25/54 (46%)
Frame = +3
Query: 381 LNYEHEIETDQEDSETSMLRNEDDDLSPENLVQKNIKHFCNLMKFAHGRNPPAF 542
LNY + E D + DL+P L +++ KHF L K A R+ P F
Sbjct: 119 LNYRY-FELVNSDGKKIWWFGGGADLTPSILFEEDGKHFHKLHKEACDRHDPTF 171
>SPBC83.07 |jmj3||Lid2 complex subunit Jmj3|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 752
Score = 27.1 bits (57), Expect = 2.2
Identities = 18/56 (32%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Frame = +3
Query: 186 SNHK-SGFEHFLLRRGLHLSKAMESGSENPQLLSSLGVLGGCNLKDLPAERNVYDN 350
SN++ S ++ L+ SK++ S PQ S L L DLP E N++D+
Sbjct: 323 SNYEFSNLRRLMVSESLYSSKSLWPHSHKPQRACSQKFLDEFYLHDLP-ESNIHDS 377
>SPBP22H7.05c |||ATPase with bromodomain protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1201
Score = 27.1 bits (57), Expect = 2.2
Identities = 10/28 (35%), Positives = 21/28 (75%), Gaps = 1/28 (3%)
Frame = +3
Query: 390 EHEIETDQEDSETSMLRNEDDDL-SPEN 470
+ E++TD + E++ ++E+DDL SP++
Sbjct: 124 DKELDTDNNEDESTTFKDEEDDLISPKS 151
>SPAP8A3.13c |||Vid 24 family protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 547
Score = 26.2 bits (55), Expect = 3.8
Identities = 9/24 (37%), Positives = 15/24 (62%)
Frame = -2
Query: 387 NSETTDNSNTVRSYHKHFFQLVNL 316
N + D SN+ R++H+H F L +
Sbjct: 31 NPNSNDVSNSQRNHHRHMFPLARI 54
>SPCC1840.02c |bgs4|orb11, cwg1|1,3-beta-glucan synthase subunit
Bgs4|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1955
Score = 26.2 bits (55), Expect = 3.8
Identities = 16/37 (43%), Positives = 23/37 (62%), Gaps = 3/37 (8%)
Frame = +3
Query: 345 DNY-EQCLSYQSFLNYEHEIETDQED--SETSMLRNE 446
DNY E+CL +S L E+ETD + SE++ RN+
Sbjct: 1169 DNYLEECLKIRSVLAEFEEMETDNVNPYSESARERNK 1205
>SPBC23G7.04c |nif1||SEL1 repear protein Nif1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 681
Score = 25.8 bits (54), Expect = 5.1
Identities = 14/46 (30%), Positives = 24/46 (52%), Gaps = 3/46 (6%)
Frame = -2
Query: 447 LRFVALTFLNLPGPFLFRAHNSETTDNSNTVRSYHKHF---FQLVN 319
L +V + + NL G +NSE++DN+ + H + F L+N
Sbjct: 414 LNYVDVQYTNLRGGAYGNGNNSESSDNAQLKKEEHLNLAIHFHLLN 459
>SPAC7D4.05 |||hydrolase |Schizosaccharomyces pombe|chr 1|||Manual
Length = 225
Score = 25.8 bits (54), Expect = 5.1
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = +3
Query: 297 LGGCNLKDLPAERNVYDNYEQCLSYQSFLNY 389
LG +KD+ A RN+ N E C +FL Y
Sbjct: 191 LGDDLIKDVSAARNIQWNAEYCDIKTNFLKY 221
>SPBC21C3.14c |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 841
Score = 25.8 bits (54), Expect = 5.1
Identities = 18/47 (38%), Positives = 23/47 (48%), Gaps = 5/47 (10%)
Frame = +3
Query: 366 SYQSFLNYEHEIETDQEDSETSMLR-----NEDDDLSPENLVQKNIK 491
S SF YE I T DSE +L+ NEDD++ + K IK
Sbjct: 562 STASFEIYERSIPTHGADSERKILKRDSLLNEDDEIFNDLNSDKTIK 608
>SPAC11D3.14c |||oxoprolinase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1260
Score = 25.4 bits (53), Expect = 6.7
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = +3
Query: 276 LLSSLGVLGGCNLKDLPAERNVYDNYEQCLSY 371
LLS+ + GG +L DL V+DN + + Y
Sbjct: 813 LLSNHPIAGGVHLPDLTVVTPVFDNNKDIIFY 844
>SPAC19D5.01 |pyp2||tyrosine phosphatase Pyp2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 711
Score = 25.4 bits (53), Expect = 6.7
Identities = 12/30 (40%), Positives = 20/30 (66%)
Frame = +3
Query: 525 RNPPAFPSTVHEKRVDANRVLGLSCANKSS 614
R+ P++PS+ +++R A+RV S KSS
Sbjct: 286 RSVPSYPSSNNQRRPSASRVRSFSNYVKSS 315
>SPBC19G7.05c |bgs1|cps1, drc1|1,3-beta-glucan synthase catalytic
subunit Bgs1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1729
Score = 25.4 bits (53), Expect = 6.7
Identities = 22/79 (27%), Positives = 39/79 (49%), Gaps = 2/79 (2%)
Frame = -2
Query: 423 LNLPGPFLFRAHNSETTDNSNTVRSYHKHFFQLVNLSNYTRLIHPRRITIEDFH--YHSP 250
L+LP PF+ H S+ S +SY+++ N++N++R I I+ ++ Y+SP
Sbjct: 300 LDLP-PFMRYRHLSDVEWKSCFYKSYYEYRSWFHNVTNFSR-IWVMHISAYWYYSAYNSP 357
Query: 249 WLLINADLVSIGNVQNRSC 193
L + + N SC
Sbjct: 358 NLYTKNYHIRLNNKPPASC 376
>SPAC15A10.16 |bud6|aip3, fat1, SPAC15E1.01|actin interacting
protein 3 homolog Bud6|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1385
Score = 25.4 bits (53), Expect = 6.7
Identities = 14/50 (28%), Positives = 22/50 (44%), Gaps = 1/50 (2%)
Frame = +3
Query: 459 SPENLVQKNIKHFCNLMKFAHGRNPPAFPSTVHEKR-VDANRVLGLSCAN 605
SP + VQK++ N ++ + FP R V +R+L S N
Sbjct: 359 SPSSFVQKDVYSRSNSLRISQANRSNVFPGATDVTRSVSDHRILSSSTIN 408
>SPAC18B11.06 |||U3 snoRNP-associated protein Lcp5
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 327
Score = 25.0 bits (52), Expect = 8.9
Identities = 11/19 (57%), Positives = 16/19 (84%), Gaps = 1/19 (5%)
Frame = +3
Query: 24 KLQRM-QRLLYQERNYTRL 77
+LQ+M +R+ Y+E NYTRL
Sbjct: 228 ELQKMRERIEYEESNYTRL 246
>SPCC1223.09 |||uricase |Schizosaccharomyces pombe|chr 3|||Manual
Length = 296
Score = 25.0 bits (52), Expect = 8.9
Identities = 12/42 (28%), Positives = 18/42 (42%)
Frame = +3
Query: 399 IETDQEDSETSMLRNEDDDLSPENLVQKNIKHFCNLMKFAHG 524
+ TD + + + +D PE K KHF + K HG
Sbjct: 59 VPTDTQKNTIYVFAKNNDVSVPEVFAAKLAKHFVDKYKHIHG 100
>SPBC12D12.01 |sad1|SPBC16H5.01c|spindle pole body protein
Sad1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 514
Score = 25.0 bits (52), Expect = 8.9
Identities = 14/41 (34%), Positives = 20/41 (48%)
Frame = +3
Query: 327 AERNVYDNYEQCLSYQSFLNYEHEIETDQEDSETSMLRNED 449
A NV+ YE + F+N E+E D+E + NED
Sbjct: 103 ASTNVF--YESDGDDEEFVNEEYENSIDEESDDEGYSLNED 141
>SPAC1486.06 |||nicotinate phosphoribosyltransferase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 410
Score = 25.0 bits (52), Expect = 8.9
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = +3
Query: 372 QSFLNYEHEIETDQEDSETSMLRNEDDDLS 461
+SF + HE E D E+S + +E DLS
Sbjct: 82 ESFYEFMHEFEFDPENSISLNYDSETKDLS 111
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,555,526
Number of Sequences: 5004
Number of extensions: 53047
Number of successful extensions: 188
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 181
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 187
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 275671126
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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