Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0013_K22
         (625 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF040661-7|AAG24223.1|  439|Caenorhabditis elegans Hypothetical ...    30   1.2  
L14745-16|AAA27916.2| 1010|Caenorhabditis elegans Kinetochore nu...    30   1.5  
U46673-1|AAC48153.4| 1003|Caenorhabditis elegans Insulin recepto...    29   2.7  
AY064245-1|AAL40865.1| 1003|Caenorhabditis elegans insulin recep...    29   2.7  
AC024826-17|AAF60789.1|  662|Caenorhabditis elegans Hypothetical...    29   2.7  
Z83125-7|CAB05619.1|  407|Caenorhabditis elegans Hypothetical pr...    28   6.2  
Z81492-9|CAB04026.2|  805|Caenorhabditis elegans Hypothetical pr...    28   6.2  
AC006733-9|AAF60491.2| 3901|Caenorhabditis elegans Hypothetical ...    28   6.2  
Z92784-2|CAB07193.3| 2029|Caenorhabditis elegans Hypothetical pr...    27   8.2  
U64847-4|AAB04873.1|  492|Caenorhabditis elegans Cytochrome p450...    27   8.2  
AC024200-12|AAF36010.2| 1232|Caenorhabditis elegans Hypothetical...    27   8.2  

>AF040661-7|AAG24223.1|  439|Caenorhabditis elegans Hypothetical
           protein W10G11.17 protein.
          Length = 439

 Score = 30.3 bits (65), Expect = 1.2
 Identities = 21/71 (29%), Positives = 40/71 (56%), Gaps = 8/71 (11%)
 Frame = +3

Query: 345 DNYEQCLSYQSFLNYEHEIETDQE------DSETSMLRNEDDDL--SPENLVQKNIKHFC 500
           D++E+C ++Q + N   E+E +++       ++T  + +E D+L  + ENL Q  + +  
Sbjct: 8   DDFEECATWQKYWNLTAELEKNKDRNLSSSGNDTEDVVSEIDELKETEENLKQTELVNTK 67

Query: 501 NLMKFAHGRNP 533
           N +K A G NP
Sbjct: 68  NRLK-ALGLNP 77


>L14745-16|AAA27916.2| 1010|Caenorhabditis elegans Kinetochore null
           protein 1 protein.
          Length = 1010

 Score = 29.9 bits (64), Expect = 1.5
 Identities = 25/84 (29%), Positives = 38/84 (45%), Gaps = 7/84 (8%)
 Frame = +3

Query: 261 SENPQLLSSLGVLGGCNL---KDLPAERNVYDNYEQCLSYQS----FLNYEHEIETDQED 419
           SE+P   SS  V GG NL    D+  E  + +N E    +++     L YE  +ET  + 
Sbjct: 88  SESPACTSSFQVFGGGNLDKTMDMSLETTINENNETARLFETTRDPTLLYEKIVETTTKV 147

Query: 420 SETSMLRNEDDDLSPENLVQKNIK 491
           +E  +    DD L+  N   +  K
Sbjct: 148 TERIVSMPLDDTLAMFNTTNQEDK 171


>U46673-1|AAC48153.4| 1003|Caenorhabditis elegans Insulin receptor
           substrate homologprotein 1 protein.
          Length = 1003

 Score = 29.1 bits (62), Expect = 2.7
 Identities = 16/57 (28%), Positives = 26/57 (45%)
 Frame = -2

Query: 342 KHFFQLVNLSNYTRLIHPRRITIEDFHYHSPWLLINADLVSIGNVQNRSCDSIYT*H 172
           K+FF L+ L+++ RL+  R  T    H  +  + +N+   S     N    S Y  H
Sbjct: 638 KNFFNLIGLNDFRRLVSKRHRTSSPNHTSTSGISLNSSNASPSASSNFLASSEYLEH 694


>AY064245-1|AAL40865.1| 1003|Caenorhabditis elegans insulin receptor
           substrate-likeprotein protein.
          Length = 1003

 Score = 29.1 bits (62), Expect = 2.7
 Identities = 16/57 (28%), Positives = 26/57 (45%)
 Frame = -2

Query: 342 KHFFQLVNLSNYTRLIHPRRITIEDFHYHSPWLLINADLVSIGNVQNRSCDSIYT*H 172
           K+FF L+ L+++ RL+  R  T    H  +  + +N+   S     N    S Y  H
Sbjct: 638 KNFFNLIGLNDFRRLVSKRHRTSSPNHTSTSGISLNSSNASPSASSNFLASSEYLEH 694


>AC024826-17|AAF60789.1|  662|Caenorhabditis elegans Hypothetical
           protein Y55F3AM.14 protein.
          Length = 662

 Score = 29.1 bits (62), Expect = 2.7
 Identities = 15/55 (27%), Positives = 27/55 (49%)
 Frame = +3

Query: 372 QSFLNYEHEIETDQEDSETSMLRNEDDDLSPENLVQKNIKHFCNLMKFAHGRNPP 536
           + F  YE E+  ++E+ +  +   E+ D S  +LV     H  +    +HG +PP
Sbjct: 27  EEFEEYEDELLEEEEEFDEELEELENSD-SASSLVSAGSPHGSSSSNGSHGSSPP 80


>Z83125-7|CAB05619.1|  407|Caenorhabditis elegans Hypothetical
           protein T15D6.9 protein.
          Length = 407

 Score = 27.9 bits (59), Expect = 6.2
 Identities = 15/46 (32%), Positives = 21/46 (45%)
 Frame = +3

Query: 264 ENPQLLSSLGVLGGCNLKDLPAERNVYDNYEQCLSYQSFLNYEHEI 401
           ENP+   S+G    CNL D   E  +    E+  S  S +N E  +
Sbjct: 49  ENPRNPESIGAKFNCNLLDTLEELGLISETERIPSLSSIINDESAV 94


>Z81492-9|CAB04026.2|  805|Caenorhabditis elegans Hypothetical
           protein E03H4.4 protein.
          Length = 805

 Score = 27.9 bits (59), Expect = 6.2
 Identities = 13/35 (37%), Positives = 21/35 (60%)
 Frame = +1

Query: 223 DEVCIYQKPWRVVVKILNCYPPWVY*AGVI*KIYQ 327
           D+  ++QK    V+  +N YP W Y  G+I ++YQ
Sbjct: 493 DDTYVFQKDLNSVLIAVNNYP-WQYGMGLIQRLYQ 526


>AC006733-9|AAF60491.2| 3901|Caenorhabditis elegans Hypothetical
            protein Y32H12A.8 protein.
          Length = 3901

 Score = 27.9 bits (59), Expect = 6.2
 Identities = 17/35 (48%), Positives = 21/35 (60%), Gaps = 3/35 (8%)
 Frame = +3

Query: 390  EHEIETDQEDSETSML-RNEDDDLSP--ENLVQKN 485
            E EIE DQED + S+L  +E+D   P  ENL   N
Sbjct: 1095 EEEIEEDQEDEQESVLDESEEDKDEPWDENLFGDN 1129


>Z92784-2|CAB07193.3| 2029|Caenorhabditis elegans Hypothetical protein
            F31C3.3 protein.
          Length = 2029

 Score = 27.5 bits (58), Expect = 8.2
 Identities = 12/46 (26%), Positives = 27/46 (58%)
 Frame = +2

Query: 5    DDIGTCQITTNAASFISRKKLHASM*KVQIQKSVYEKE*LHKKRLR 142
            +++ T   T   AS +S +   ++  K+ +QKS++EK+ + + + R
Sbjct: 1868 EEVSTFSFTRKIASTLSMRSNKSASEKLMLQKSLHEKDDIDRMKER 1913


>U64847-4|AAB04873.1|  492|Caenorhabditis elegans Cytochrome p450
           family protein 14A5 protein.
          Length = 492

 Score = 27.5 bits (58), Expect = 8.2
 Identities = 14/38 (36%), Positives = 18/38 (47%)
 Frame = +3

Query: 363 LSYQSFLNYEHEIETDQEDSETSMLRNEDDDLSPENLV 476
           L Y S  N     +   E+  TS L+N D +  PEN V
Sbjct: 231 LGYHSIKNNIKSYQQFIEEEVTSQLKNYDGESEPENFV 268


>AC024200-12|AAF36010.2| 1232|Caenorhabditis elegans Hypothetical
           protein Y71F9AL.17 protein.
          Length = 1232

 Score = 27.5 bits (58), Expect = 8.2
 Identities = 17/48 (35%), Positives = 25/48 (52%), Gaps = 2/48 (4%)
 Frame = -2

Query: 309 YTRLIHPRRITIEDFHYHSPWLLINAD--LVSIGNVQNRSCDSIYT*H 172
           +T L H   I    FH+  PW++  +D   V I N Q+R+  +I T H
Sbjct: 89  FTLLGHLDYIRTTFFHHKYPWIISASDDQTVRIWNWQSRNSIAILTGH 136


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,201,966
Number of Sequences: 27780
Number of extensions: 294149
Number of successful extensions: 960
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 921
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 959
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1363963182
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)