Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0013_K21
         (387 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY122214-1|AAM52726.1|  144|Drosophila melanogaster LP08817p pro...    28   4.9  
AE014296-3691|AAF51840.1|  144|Drosophila melanogaster CG14457-P...    28   4.9  
AE014296-3690|AAX52768.1|  271|Drosophila melanogaster CG14457-P...    28   4.9  

>AY122214-1|AAM52726.1|  144|Drosophila melanogaster LP08817p
           protein.
          Length = 144

 Score = 27.9 bits (59), Expect = 4.9
 Identities = 11/28 (39%), Positives = 17/28 (60%)
 Frame = +3

Query: 126 TITQRKRIFLFDKAEFNFYNVVSLILNF 209
           T+T   +  L+ K  F FYNV +L ++F
Sbjct: 32  TVTMHTKTRLYSKGGFTFYNVTNLHVDF 59


>AE014296-3691|AAF51840.1|  144|Drosophila melanogaster CG14457-PA,
           isoform A protein.
          Length = 144

 Score = 27.9 bits (59), Expect = 4.9
 Identities = 11/28 (39%), Positives = 17/28 (60%)
 Frame = +3

Query: 126 TITQRKRIFLFDKAEFNFYNVVSLILNF 209
           T+T   +  L+ K  F FYNV +L ++F
Sbjct: 32  TVTMHTKTRLYSKGGFTFYNVTNLHVDF 59


>AE014296-3690|AAX52768.1|  271|Drosophila melanogaster CG14457-PB,
           isoform B protein.
          Length = 271

 Score = 27.9 bits (59), Expect = 4.9
 Identities = 11/28 (39%), Positives = 17/28 (60%)
 Frame = +3

Query: 126 TITQRKRIFLFDKAEFNFYNVVSLILNF 209
           T+T   +  L+ K  F FYNV +L ++F
Sbjct: 159 TVTMHTKTRLYSKGGFTFYNVTNLHVDF 186


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,457,411
Number of Sequences: 53049
Number of extensions: 274727
Number of successful extensions: 605
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 600
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 605
length of database: 24,988,368
effective HSP length: 77
effective length of database: 20,903,595
effective search space used: 1066083345
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)