Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0013_K14
         (90 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase ...    18   9.4  
AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase pro...    18   9.4  
AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cycl...    18   9.4  
AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase ...    18   9.4  

>AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase
          protein.
          Length = 492

 Score = 18.2 bits (35), Expect = 9.4
 Identities = 9/17 (52%), Positives = 10/17 (58%)
 Frame = -2

Query: 56 TRIKRYFFFGISS*NRP 6
          TRI   FF  +SS  RP
Sbjct: 3  TRILLLFFLLLSSCTRP 19


>AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase
           protein.
          Length = 580

 Score = 18.2 bits (35), Expect = 9.4
 Identities = 7/11 (63%), Positives = 8/11 (72%)
 Frame = -2

Query: 71  FKKIITRIKRY 39
           FKK + RIK Y
Sbjct: 132 FKKSVQRIKPY 142


>AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cyclase
           alpha 1 subunit protein.
          Length = 699

 Score = 18.2 bits (35), Expect = 9.4
 Identities = 6/7 (85%), Positives = 6/7 (85%)
 Frame = -1

Query: 36  FFWHFVV 16
           F WHFVV
Sbjct: 295 FPWHFVV 301


>AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase
          protein.
          Length = 628

 Score = 18.2 bits (35), Expect = 9.4
 Identities = 9/17 (52%), Positives = 10/17 (58%)
 Frame = -2

Query: 56 TRIKRYFFFGISS*NRP 6
          TRI   FF  +SS  RP
Sbjct: 3  TRILLLFFLLLSSCTRP 19


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,196
Number of Sequences: 438
Number of extensions: 167
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 146,343
effective HSP length: 11
effective length of database: 141,525
effective search space used:  2547450
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 35 (18.9 bits)