Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0013_K10
(498 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
09_01_0079 - 1159963-1160211,1160303-1160509,1160631-1160801,116... 51 4e-07
08_02_0162 + 13464698-13464974,13465719-13465837,13465920-134665... 47 1e-05
06_03_0614 - 22753092-22753349,22754059-22754277,22754712-227549... 46 1e-05
04_04_0435 - 25170348-25170593,25170989-25171189,25171580-251717... 46 2e-05
03_02_0555 + 9431451-9431688,9432685-9432803,9432886-9433079,943... 36 0.018
08_01_1010 - 10215625-10216335,10216372-10216473 32 0.22
07_01_1143 - 10711023-10711884,10713603-10713826,10714253-107145... 32 0.29
01_06_0249 + 27868897-27871599 31 0.39
05_01_0351 + 2750253-2751042,2751951-2751958,2752122-2752149,275... 31 0.68
06_01_0493 - 3536207-3537056,3537603-3537826,3538234-3538503,353... 30 1.2
01_06_0182 - 27264990-27265049,27265531-27265648,27265733-272658... 29 1.6
01_01_0668 - 5109476-5110112,5110196-5110439,5110519-5110917,511... 29 1.6
01_01_1063 - 8386813-8387236,8387322-8387779 29 2.1
04_01_0162 + 1845295-1846317,1846430-1846565,1848436-1848626,184... 29 2.7
03_06_0340 + 33252677-33252864,33253086-33254442,33254565-332546... 29 2.7
09_04_0487 - 18014469-18014660,18014935-18015016,18015297-180155... 28 3.6
08_02_0450 - 17266977-17267165,17268017-17268053,17268139-172695... 28 3.6
07_01_0577 - 4286048-4286186,4286600-4286660,4286957-4287089,428... 28 3.6
06_03_1146 - 28004896-28005554,28005664-28005844 28 3.6
03_01_0515 - 3864796-3865425 28 3.6
08_01_0105 + 756998-757225,757311-758597 28 4.8
05_01_0004 - 34967-35149,35340-35501,36078-36225,36309-36385,365... 28 4.8
03_05_0341 + 23300588-23300710,23300958-23301363,23301463-233016... 28 4.8
03_02_0553 - 9420960-9421164,9421634-9421812,9421902-9421970,942... 28 4.8
03_02_0071 + 5425722-5427154,5427259-5427464,5428445-5428686,542... 28 4.8
01_06_0565 + 30287253-30287502,30287522-30289010,30289133-302892... 28 4.8
08_01_0375 - 3307206-3307316,3307870-3307965,3308061-3308132,330... 27 6.3
07_03_1564 + 27749899-27750166,27750431-27750507,27750923-277509... 27 6.3
06_01_0172 + 1362101-1363708 27 6.3
04_04_1125 + 31085106-31085714 27 6.3
01_06_0842 - 32365240-32365615,32365772-32366127 27 6.3
05_06_0058 + 25258532-25258685,25258767-25258823,25258923-252590... 27 8.4
05_01_0028 + 182528-183852,183967-184127,184872-185116,185330-18... 27 8.4
04_03_0904 + 20717005-20718087 27 8.4
03_01_0178 + 1437263-1438017,1438754-1438858,1438950-1439072,143... 27 8.4
02_02_0537 + 11308195-11309667 27 8.4
01_06_1246 - 35703119-35703811,35704033-35704074,35704355-357045... 27 8.4
01_05_0645 - 23899579-23904483 27 8.4
>09_01_0079 -
1159963-1160211,1160303-1160509,1160631-1160801,
1161732-1161869,1162184-1162273,1162354-1162431,
1162510-1163166,1163245-1163363,1164305-1164584
Length = 662
Score = 51.2 bits (117), Expect = 4e-07
Identities = 23/28 (82%), Positives = 26/28 (92%)
Frame = +2
Query: 8 AEMNGRIVGTKPLYVALAQRKEDRKAHL 91
AEMN ++VG+KPLYVALAQRKEDRKA L
Sbjct: 380 AEMNSKMVGSKPLYVALAQRKEDRKARL 407
>08_02_0162 +
13464698-13464974,13465719-13465837,13465920-13466579,
13466686-13466763,13466849-13466938,13467241-13467378,
13467730-13467738
Length = 456
Score = 46.8 bits (106), Expect = 1e-05
Identities = 19/26 (73%), Positives = 25/26 (96%)
Frame = +2
Query: 14 MNGRIVGTKPLYVALAQRKEDRKAHL 91
MNG+++G+KPLYVALAQRKE+R+A L
Sbjct: 382 MNGKMIGSKPLYVALAQRKEERRARL 407
>06_03_0614 -
22753092-22753349,22754059-22754277,22754712-22754960,
22755186-22755275,22755379-22755456,22755562-22756337,
22757042-22757384
Length = 670
Score = 46.4 bits (105), Expect = 1e-05
Identities = 20/27 (74%), Positives = 25/27 (92%)
Frame = +2
Query: 11 EMNGRIVGTKPLYVALAQRKEDRKAHL 91
+MNG++VG KPLYVA+AQRKE+RKA L
Sbjct: 402 KMNGKMVGKKPLYVAVAQRKEERKAFL 428
Score = 31.5 bits (68), Expect = 0.39
Identities = 13/26 (50%), Positives = 19/26 (73%)
Frame = +2
Query: 14 MNGRIVGTKPLYVALAQRKEDRKAHL 91
+NG+ +G LYVA AQ+K +R+A L
Sbjct: 300 LNGKSIGDMVLYVARAQKKSERQAEL 325
>04_04_0435 -
25170348-25170593,25170989-25171189,25171580-25171756,
25172284-25172418,25173131-25173262,25173292-25173369,
25173452-25174108,25174210-25174328,25175897-25176173
Length = 673
Score = 45.6 bits (103), Expect = 2e-05
Identities = 20/27 (74%), Positives = 23/27 (85%)
Frame = +2
Query: 11 EMNGRIVGTKPLYVALAQRKEDRKAHL 91
EMNG+++ KPLYVA AQRKEDRKA L
Sbjct: 394 EMNGKMISGKPLYVAFAQRKEDRKAML 420
Score = 27.5 bits (58), Expect = 6.3
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = +2
Query: 11 EMNGRIVGTKPLYVALAQRKEDRKAHL 91
E+NG+ + K YV AQ+K +R+ L
Sbjct: 277 ELNGKKINDKEWYVGRAQKKSEREIEL 303
>03_02_0555 +
9431451-9431688,9432685-9432803,9432886-9433079,
9433174-9433430,9433544-9433650,9433715-9433888,
9434359-9434490,9434776-9434955,9435062-9435265
Length = 534
Score = 35.9 bits (79), Expect = 0.018
Identities = 15/26 (57%), Positives = 21/26 (80%)
Frame = +2
Query: 14 MNGRIVGTKPLYVALAQRKEDRKAHL 91
MNG ++G+K LYVA AQ+K +RK +L
Sbjct: 264 MNGMLLGSKTLYVARAQKKAERKQYL 289
>08_01_1010 - 10215625-10216335,10216372-10216473
Length = 270
Score = 32.3 bits (70), Expect = 0.22
Identities = 16/39 (41%), Positives = 19/39 (48%)
Frame = +2
Query: 176 FVPTIPPAQRFYGPAQMPQIRPTPRWTAQPPVRPSTQTP 292
+ P+ PP +R P P TPR A P PST TP
Sbjct: 73 YTPSTPP-RRAASPDYTPSTPTTPRRAASPDYTPSTPTP 110
>07_01_1143 -
10711023-10711884,10713603-10713826,10714253-10714522,
10715071-10715175
Length = 486
Score = 31.9 bits (69), Expect = 0.29
Identities = 18/50 (36%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Frame = +2
Query: 155 PSSAGGYFVPTIPPAQRFYGPAQMPQIRPTPRWTA-QPPVRPSTQTPASA 301
P GG + P PP + P +MP +P P++ A QP + P Q+ AS+
Sbjct: 413 PYYHGGQYPPYYPPYGGYMPPPRMPYQQP-PQYPAYQPMLAPPAQSQASS 461
>01_06_0249 + 27868897-27871599
Length = 900
Score = 31.5 bits (68), Expect = 0.39
Identities = 14/39 (35%), Positives = 22/39 (56%)
Frame = +3
Query: 153 NQVVQEDTLFPPYLLHNAFMVQHKCRKYDLHPDGLPNHL 269
N V E+ L PP++L N+ + Q + K + + D L HL
Sbjct: 208 NYVYSENALCPPFMLENSMLEQAQAVKENFNCDQLKTHL 246
>05_01_0351 +
2750253-2751042,2751951-2751958,2752122-2752149,
2754692-2754775,2755780-2757548
Length = 892
Score = 30.7 bits (66), Expect = 0.68
Identities = 15/32 (46%), Positives = 17/32 (53%)
Frame = +2
Query: 191 PPAQRFYGPAQMPQIRPTPRWTAQPPVRPSTQ 286
PP Q PAQ P ++P R QPP P TQ
Sbjct: 707 PPLQPPARPAQHPHLQPPARPAQQPPRPPVTQ 738
Score = 28.3 bits (60), Expect = 3.6
Identities = 18/50 (36%), Positives = 21/50 (42%), Gaps = 4/50 (8%)
Frame = +2
Query: 155 PSSAGG-YFVPTIPPAQRFYG---PAQMPQIRPTPRWTAQPPVRPSTQTP 292
P+S GG P A + G P P RP QPP RP+ Q P
Sbjct: 683 PASGGGDAAAPLAKSATKSVGFAPPPLQPPARPAQHPHLQPPARPAQQPP 732
>06_01_0493 -
3536207-3537056,3537603-3537826,3538234-3538503,
3539042-3539146
Length = 482
Score = 29.9 bits (64), Expect = 1.2
Identities = 17/52 (32%), Positives = 25/52 (48%)
Frame = +2
Query: 155 PSSAGGYFVPTIPPAQRFYGPAQMPQIRPTPRWTAQPPVRPSTQTPASAYAN 310
P G + P PP + P +MP P P++ PP +P TPA + A+
Sbjct: 411 PQYYHGQYPPYYPPYGGYMPPPRMPY-PPPPQY---PPYQPMLATPAQSQAS 458
>01_06_0182 -
27264990-27265049,27265531-27265648,27265733-27265811,
27266816-27267116
Length = 185
Score = 29.5 bits (63), Expect = 1.6
Identities = 18/50 (36%), Positives = 22/50 (44%)
Frame = +2
Query: 155 PSSAGGYFVPTIPPAQRFYGPAQMPQIRPTPRWTAQPPVRPSTQTPASAY 304
P A G+ P PP R Y PQ P P + PP+ P T A+ Y
Sbjct: 48 PQPAVGFPQPAPPPGLRHY-----PQ-PPPPSYAVYPPLPPQTYPAAAPY 91
>01_01_0668 -
5109476-5110112,5110196-5110439,5110519-5110917,
5111390-5111668,5111886-5112257,5112371-5112475,
5112832-5112909,5112990-5113199,5113287-5113406,
5113508-5113606,5113685-5113750,5113914-5114141,
5114216-5114521,5115324-5115381
Length = 1066
Score = 29.5 bits (63), Expect = 1.6
Identities = 16/36 (44%), Positives = 18/36 (50%)
Frame = +2
Query: 170 GYFVPTIPPAQRFYGPAQMPQIRPTPRWTAQPPVRP 277
G VP PP QR PA P PR + +PPV P
Sbjct: 198 GNGVPPYPPPQRSL-PAIPPSTSGVPRESVKPPVAP 232
Score = 27.1 bits (57), Expect = 8.4
Identities = 16/46 (34%), Positives = 18/46 (39%), Gaps = 3/46 (6%)
Frame = +2
Query: 179 VPTIPPAQRFYGPAQMPQI---RPTPRWTAQPPVRPSTQTPASAYA 307
V PPA P PQ P P P + PS Q PA + A
Sbjct: 129 VELTPPAPTHVAPVAPPQAAVENPAPVLPGTPALLPSVQAPAPSVA 174
>01_01_1063 - 8386813-8387236,8387322-8387779
Length = 293
Score = 29.1 bits (62), Expect = 2.1
Identities = 19/50 (38%), Positives = 22/50 (44%), Gaps = 6/50 (12%)
Frame = +2
Query: 167 GGYFV------PTIPPAQRFYGPAQMPQIRPTPRWTAQPPVRPSTQTPAS 298
GGY+V P +PP YGP P P P A P P TPA+
Sbjct: 226 GGYYVGHGAPHPGMPPPPMPYGPHPHPHQPPPPAAAATAPSAPEI-TPAA 274
>04_01_0162 +
1845295-1846317,1846430-1846565,1848436-1848626,
1848780-1848887,1849001-1849204,1849294-1849525,
1849602-1849751,1849830-1850007,1850416-1850519,
1850611-1850933,1851274-1851459,1851672-1851899
Length = 1020
Score = 28.7 bits (61), Expect = 2.7
Identities = 16/41 (39%), Positives = 19/41 (46%), Gaps = 1/41 (2%)
Frame = +2
Query: 191 PPAQRFYG-PAQMPQIRPTPRWTAQPPVRPSTQTPASAYAN 310
PP Q FYG P Q P R T Q PV+ P + + N
Sbjct: 208 PPMQGFYGGPPPANQQFPMSRPTFQQPVQTMPPPPMAGFGN 248
>03_06_0340 +
33252677-33252864,33253086-33254442,33254565-33254667,
33256081-33256171,33257208-33257300,33258316-33258471,
33258583-33258655
Length = 686
Score = 28.7 bits (61), Expect = 2.7
Identities = 13/28 (46%), Positives = 17/28 (60%), Gaps = 1/28 (3%)
Frame = +2
Query: 194 PAQRFY-GPAQMPQIRPTPRWTAQPPVR 274
PAQ +Y GP Q P + P++ A PP R
Sbjct: 628 PAQGYYQGPYQGPPVMAPPQYAAPPPRR 655
>09_04_0487 -
18014469-18014660,18014935-18015016,18015297-18015548,
18015634-18017789
Length = 893
Score = 28.3 bits (60), Expect = 3.6
Identities = 18/49 (36%), Positives = 20/49 (40%)
Frame = +2
Query: 155 PSSAGGYFVPTIPPAQRFYGPAQMPQIRPTPRWTAQPPVRPSTQTPASA 301
PSSA P+ P P P +R PR PP PS Q P A
Sbjct: 470 PSSAAAPAPPSPPEPPSPRHPPSPPPLRSPPRQPTPPP-SPSQQPPLPA 517
>08_02_0450 -
17266977-17267165,17268017-17268053,17268139-17269514,
17285369-17286055,17286146-17286343
Length = 828
Score = 28.3 bits (60), Expect = 3.6
Identities = 18/49 (36%), Positives = 20/49 (40%)
Frame = +2
Query: 155 PSSAGGYFVPTIPPAQRFYGPAQMPQIRPTPRWTAQPPVRPSTQTPASA 301
PSSA P+ P P P +R PR PP PS Q P A
Sbjct: 516 PSSAAAPAPPSPPEPPSPRHPPSPPPLRSPPRQPTPPP-SPSQQPPLPA 563
>07_01_0577 -
4286048-4286186,4286600-4286660,4286957-4287089,
4287286-4287350,4288346-4288451,4288529-4288750,
4289619-4289852,4289948-4290037,4290605-4291507
Length = 650
Score = 28.3 bits (60), Expect = 3.6
Identities = 13/38 (34%), Positives = 16/38 (42%)
Frame = +2
Query: 182 PTIPPAQRFYGPAQMPQIRPTPRWTAQPPVRPSTQTPA 295
P++P P + P PR A PP P TPA
Sbjct: 28 PSLPLPSALMPPKKRRLFTPAPRHAATPPPPPPPPTPA 65
>06_03_1146 - 28004896-28005554,28005664-28005844
Length = 279
Score = 28.3 bits (60), Expect = 3.6
Identities = 28/81 (34%), Positives = 31/81 (38%), Gaps = 6/81 (7%)
Frame = +2
Query: 155 PSSAGGYFVPTIPPAQRFYGPAQM-PQIRPTPRWTAQPPVRPSTQ-----TPASAYANMQ 316
P+ A P+ PPA PA M P TP AQPP P T TPA+ AN
Sbjct: 196 PAPAPTTSTPSSPPA-----PAAMAPSPSTTPGGVAQPPPPPGTDGANATTPAAPAAN-D 249
Query: 317 XXXXXXXXXXXXXXXXTSLGA 379
TSLGA
Sbjct: 250 RSGAAAAAPVVAGVVVTSLGA 270
>03_01_0515 - 3864796-3865425
Length = 209
Score = 28.3 bits (60), Expect = 3.6
Identities = 16/48 (33%), Positives = 18/48 (37%)
Frame = +2
Query: 155 PSSAGGYFVPTIPPAQRFYGPAQMPQIRPTPRWTAQPPVRPSTQTPAS 298
P +AG P PP P P P P A PP P + P S
Sbjct: 63 PPAAGPLMPPPPPPPSVTSSPPPPPLPPPPPPPAASPPPPPPSPPPPS 110
>08_01_0105 + 756998-757225,757311-758597
Length = 504
Score = 27.9 bits (59), Expect = 4.8
Identities = 23/97 (23%), Positives = 36/97 (37%), Gaps = 2/97 (2%)
Frame = +2
Query: 203 RFYGPAQMPQIRPTPRWTAQPPVRPSTQTPASAYANMQXXXXXXXXXXXXXXXXTSLGAR 382
+F G A++P R RW A ++ +T TP + Y + T
Sbjct: 112 KFMG-AELPNARAAVRWGADYLLKAATATPGALYVQVADPNQDHRCWERPEDMDTPRSVY 170
Query: 383 PITGQQGVAGTAGSIRAPLVTQSS--RPAGYKYTANM 487
+T + + AG A L S R A Y+A +
Sbjct: 171 RVTADKPGSDVAGETAAALAASSMVFRRADPAYSARL 207
>05_01_0004 -
34967-35149,35340-35501,36078-36225,36309-36385,
36507-36577,36850-37263,37518-38268
Length = 601
Score = 27.9 bits (59), Expect = 4.8
Identities = 15/41 (36%), Positives = 16/41 (39%)
Frame = +2
Query: 179 VPTIPPAQRFYGPAQMPQIRPTPRWTAQPPVRPSTQTPASA 301
VP P P P PTP T P P TPA+A
Sbjct: 118 VPAAAPPPTAPSPYSAPSPTPTPTHTQPRPSPPLLPTPATA 158
>03_05_0341 +
23300588-23300710,23300958-23301363,23301463-23301671,
23301944-23302298,23302392-23302630,23303777-23304055
Length = 536
Score = 27.9 bits (59), Expect = 4.8
Identities = 12/41 (29%), Positives = 21/41 (51%)
Frame = +1
Query: 28 CWNKTSLCCFSSTQGRPQSPFDFTVHATHGKYAYATNGSDI 150
C + +C F T+G F FTVH + ++ +G+D+
Sbjct: 302 CLQEEDICLFVPTKGGRN--FAFTVHLLQAEVTHSRDGTDV 340
>03_02_0553 -
9420960-9421164,9421634-9421812,9421902-9421970,
9422452-9422607,9422756-9422968
Length = 273
Score = 27.9 bits (59), Expect = 4.8
Identities = 15/32 (46%), Positives = 18/32 (56%)
Frame = +2
Query: 155 PSSAGGYFVPTIPPAQRFYGPAQMPQIRPTPR 250
P++ GGY A R GPA +PQ RP PR
Sbjct: 193 PANNGGYVRNVAKSAPRG-GPAGLPQGRPRPR 223
>03_02_0071 +
5425722-5427154,5427259-5427464,5428445-5428686,
5428788-5429570
Length = 887
Score = 27.9 bits (59), Expect = 4.8
Identities = 14/39 (35%), Positives = 15/39 (38%)
Frame = +2
Query: 182 PTIPPAQRFYGPAQMPQIRPTPRWTAQPPVRPSTQTPAS 298
P PPA F P P PP P+T TP S
Sbjct: 53 PPPPPAPDFTSDPSTPPAPDAPSGDFFPPAPPTTTTPTS 91
>01_06_0565 +
30287253-30287502,30287522-30289010,30289133-30289277,
30289679-30289729
Length = 644
Score = 27.9 bits (59), Expect = 4.8
Identities = 15/47 (31%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Frame = +2
Query: 155 PSSAGGYFVPTIPPAQRFYGPA-QMPQIRPTPRWTAQPPVRPSTQTP 292
P + GGY+ P+ P+ Y P +P P+ ++ P PS+ TP
Sbjct: 523 PGTGGGYYPPS--PSTGGYTPTPDVPISTPSSPYSPLVPTPPSSTTP 567
>08_01_0375 -
3307206-3307316,3307870-3307965,3308061-3308132,
3308247-3308315,3308427-3308513,3308753-3308858,
3309118-3309237,3309327-3309406,3309497-3309878,
3310746-3310814,3311460-3312202
Length = 644
Score = 27.5 bits (58), Expect = 6.3
Identities = 17/47 (36%), Positives = 17/47 (36%)
Frame = +2
Query: 152 QPSSAGGYFVPTIPPAQRFYGPAQMPQIRPTPRWTAQPPVRPSTQTP 292
QP Y P PP Q YG PQ P P PP P P
Sbjct: 21 QPPPMNPYGPP--PPQQPAYGHMPPPQGAPPPFLAPPPPPPPGPPPP 65
>07_03_1564 +
27749899-27750166,27750431-27750507,27750923-27750950,
27751117-27751261,27751351-27751429,27751515-27751633,
27751732-27752073,27754807-27754896,27755730-27755955,
27756398-27756784,27757176-27757496
Length = 693
Score = 27.5 bits (58), Expect = 6.3
Identities = 14/36 (38%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Frame = +1
Query: 256 CPTTCKTKHSNT-CIGLRKYATTLPSSTKSSNTGCI 360
CPT C+ + N C+ L K A +L K N GC+
Sbjct: 477 CPT-CRHELGNIRCLALEKVAASLELPCKYQNFGCL 511
>06_01_0172 + 1362101-1363708
Length = 535
Score = 27.5 bits (58), Expect = 6.3
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = +2
Query: 218 AQMPQIRPTPRWTAQPPVRP 277
A++P PT R+T PPV+P
Sbjct: 30 AELPTSLPTSRYTVTPPVQP 49
>04_04_1125 + 31085106-31085714
Length = 202
Score = 27.5 bits (58), Expect = 6.3
Identities = 17/40 (42%), Positives = 18/40 (45%), Gaps = 1/40 (2%)
Frame = +2
Query: 182 PTIPPAQRFYGPAQMPQIRPTPRWTAQPPVRPST-QTPAS 298
PT PP PA PTP WT P P T TPA+
Sbjct: 56 PTTPPTPWTPPPATPTPPTPTP-WTPTPATPPPTPATPAT 94
>01_06_0842 - 32365240-32365615,32365772-32366127
Length = 243
Score = 27.5 bits (58), Expect = 6.3
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = +1
Query: 100 VHATHGKYAYATNGSDIPTK*CRRILCSHHTS 195
+HA Y +A + S + CRR+L +H T+
Sbjct: 23 LHALVSMYGHAMDASSLLWSQCRRVLITHQTT 54
>05_06_0058 +
25258532-25258685,25258767-25258823,25258923-25259013,
25259074-25259282,25259421-25259548,25259651-25259788,
25261017-25261083,25261232-25261353
Length = 321
Score = 27.1 bits (57), Expect = 8.4
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = -2
Query: 203 VVQEVWWEQSILLHYLVGISDPFVAYAYLPCVACT 99
+++ +WW I + +VG FVAYA+ P V T
Sbjct: 59 LLEPLWWVGMITM--IVGEVANFVAYAFAPAVLVT 91
>05_01_0028 +
182528-183852,183967-184127,184872-185116,185330-186073
Length = 824
Score = 27.1 bits (57), Expect = 8.4
Identities = 13/41 (31%), Positives = 19/41 (46%)
Frame = +2
Query: 179 VPTIPPAQRFYGPAQMPQIRPTPRWTAQPPVRPSTQTPASA 301
+PT PP P P + P P PP P+ + P+S+
Sbjct: 96 LPTPPPPPASISPTPAPPLPPPP--APAPPPTPTPKFPSSS 134
>04_03_0904 + 20717005-20718087
Length = 360
Score = 27.1 bits (57), Expect = 8.4
Identities = 14/37 (37%), Positives = 18/37 (48%)
Frame = +2
Query: 182 PTIPPAQRFYGPAQMPQIRPTPRWTAQPPVRPSTQTP 292
P PP + P PQ +P P T +P +P T TP
Sbjct: 236 PNPPPTYKPAPPTYKPQPKPNPPPTYKPQPKP-TPTP 271
>03_01_0178 +
1437263-1438017,1438754-1438858,1438950-1439072,
1439908-1440078,1440163-1440292,1440372-1440581,
1440675-1440773
Length = 530
Score = 27.1 bits (57), Expect = 8.4
Identities = 16/66 (24%), Positives = 23/66 (34%)
Frame = +2
Query: 182 PTIPPAQRFYGPAQMPQIRPTPRWTAQPPVRPSTQTPASAYANMQXXXXXXXXXXXXXXX 361
P PP +G P P QPPV P+ T ++A + M
Sbjct: 127 PQPPPPAAQHGVQLAKAETPPPPQRTQPPVLPAGSTRSTAASGMSATTSGGSERDGATPR 186
Query: 362 XTSLGA 379
T+ G+
Sbjct: 187 STASGS 192
>02_02_0537 + 11308195-11309667
Length = 490
Score = 27.1 bits (57), Expect = 8.4
Identities = 21/75 (28%), Positives = 31/75 (41%)
Frame = +1
Query: 76 PQSPFDFTVHATHGKYAYATNGSDIPTK*CRRILCSHHTSCTTLLWSSTNAANTTYTPMD 255
PQ+P+ H Y P CR C++ SC L S N +TTY +
Sbjct: 168 PQTPYILHNHPNSFLPQYILRTQ--PKAPCRS--CAYKDSCQKKL-KSQNPMSTTYENLQ 222
Query: 256 CPTTCKTKHSNTCIG 300
+ KT+ + +C G
Sbjct: 223 PRLSFKTEQTLSCFG 237
>01_06_1246 -
35703119-35703811,35704033-35704074,35704355-35704576,
35705077-35705466,35705560-35705637
Length = 474
Score = 27.1 bits (57), Expect = 8.4
Identities = 15/35 (42%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Frame = +2
Query: 197 AQRFYGPAQMPQIRP-TPRWTAQPPVRPSTQTPAS 298
A R Y P + RP TP +++PP R S TP S
Sbjct: 301 ASRTYVPRAISIQRPATPNKSSRPPSRQSPSTPPS 335
>01_05_0645 - 23899579-23904483
Length = 1634
Score = 27.1 bits (57), Expect = 8.4
Identities = 21/75 (28%), Positives = 31/75 (41%)
Frame = +1
Query: 76 PQSPFDFTVHATHGKYAYATNGSDIPTK*CRRILCSHHTSCTTLLWSSTNAANTTYTPMD 255
PQ+P+ H Y P CR C++ SC L S N +TTY +
Sbjct: 1287 PQTPYILHNHPNSFLPQYILRTQ--PKAPCRS--CAYKDSCQKKL-KSQNPMSTTYENLQ 1341
Query: 256 CPTTCKTKHSNTCIG 300
+ KT+ + +C G
Sbjct: 1342 PRLSFKTEQTLSCFG 1356
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,980,010
Number of Sequences: 37544
Number of extensions: 338466
Number of successful extensions: 1385
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 1257
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1381
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1047416480
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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