Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0013_K10
(498 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC065540-1|AAH65540.1| 631|Homo sapiens PABPC4 protein protein. 95 1e-19
AL365277-15|CAI16425.1| 410|Homo sapiens poly(A) binding protei... 95 1e-19
Z48501-1|CAA88401.1| 522|Homo sapiens polyadenylate binding pro... 92 1e-18
U75686-1|AAB97309.1| 644|Homo sapiens polyadenylate binding pro... 92 1e-18
U33818-1|AAC50350.1| 644|Homo sapiens inducible poly(A)-binding... 92 1e-18
BC118568-1|AAI18569.1| 252|Homo sapiens PABPC4 protein protein. 92 1e-18
BC106908-1|AAI06909.1| 281|Homo sapiens PABPC4 protein protein. 92 1e-18
BC094755-1|AAH94755.1| 660|Homo sapiens PABPC4 protein protein. 92 1e-18
BC071591-1|AAH71591.1| 660|Homo sapiens PABPC4 protein protein. 92 1e-18
AL845289-3|CAI12300.1| 644|Homo sapiens poly(A) binding protein... 92 1e-18
AL845289-2|CAI12298.1| 660|Homo sapiens poly(A) binding protein... 92 1e-18
AL845289-1|CAI12299.1| 615|Homo sapiens poly(A) binding protein... 92 1e-18
AL365277-4|CAI16414.1| 644|Homo sapiens poly(A) binding protein... 92 1e-18
AL365277-3|CAI16412.1| 660|Homo sapiens poly(A) binding protein... 92 1e-18
AL365277-2|CAI16413.1| 615|Homo sapiens poly(A) binding protein... 92 1e-18
AK222917-1|BAD96637.1| 371|Homo sapiens PABPC4 protein variant ... 92 1e-18
AB208962-1|BAD92199.1| 358|Homo sapiens PABPC4 protein variant ... 92 1e-18
Y00345-1|CAA68428.1| 633|Homo sapiens protein ( Human mRNA for ... 91 3e-18
U68104-1|AAD08718.1| 636|Homo sapiens poly(A)-binding protein p... 91 3e-18
BC041863-1|AAH41863.1| 636|Homo sapiens poly(A) binding protein... 91 3e-18
BC023520-1|AAH23520.1| 636|Homo sapiens poly(A) binding protein... 91 3e-18
BC015958-1|AAH15958.1| 636|Homo sapiens PABPC1 protein protein. 91 3e-18
AF132026-1|AAG38953.1| 631|Homo sapiens testis-specific poly(A)... 84 2e-16
AL109839-1|CAI95631.1| 614|Homo sapiens chromosome 20 open read... 84 3e-16
AL008725-4|CAI95662.1| 614|Homo sapiens chromosome 20 open read... 84 3e-16
DQ120640-1|ABB92425.1| 630|Homo sapiens PABP3 protein. 82 1e-15
BC027617-1|AAH27617.1| 631|Homo sapiens poly(A) binding protein... 82 1e-15
AL359757-1|CAH70805.1| 631|Homo sapiens poly(A) binding protein... 82 1e-15
BC045608-1|AAH45608.1| 631|Homo sapiens poly(A) binding protein... 79 1e-14
BC068242-1|AAH68242.1| 269|Homo sapiens LOC728773 protein protein. 69 9e-12
D12799-1|BAA02244.1| 193|Homo sapiens polyadenylate binding pro... 58 2e-08
BX537907-1|CAD97892.1| 372|Homo sapiens hypothetical protein pr... 36 0.059
BC012055-1|AAH12055.1| 384|Homo sapiens aryl hydrocarbon recept... 36 0.059
AK023970-1|BAB14744.1| 384|Homo sapiens protein ( Homo sapiens ... 36 0.059
AJ830743-1|CAH25996.1| 360|Homo sapiens aryl hydrocarbon recept... 36 0.059
AJ830742-1|CAH25995.1| 362|Homo sapiens aryl hydrocarbon recept... 36 0.059
AJ633678-1|CAG17883.1| 321|Homo sapiens aryl hydrocarbon recept... 36 0.059
AJ633677-1|CAG17882.1| 324|Homo sapiens aryl hydrocarbon recept... 36 0.059
AF525970-1|AAM88405.1| 321|Homo sapiens aryl hydrocarbon recept... 36 0.059
AF180472-1|AAF26708.1| 384|Homo sapiens aryl-hydrocarbon intera... 36 0.059
AF148864-1|AAF74023.1| 384|Homo sapiens aryl-hydrocarbon intera... 36 0.059
BC030578-1|AAH30578.1| 515|Homo sapiens EIF4G3 protein protein. 34 0.24
AL672037-2|CAI16194.1| 630|Homo sapiens eukaryotic translation ... 34 0.24
AL627311-1|CAI14552.1| 630|Homo sapiens eukaryotic translation ... 34 0.24
AL358392-1|CAI12154.1| 630|Homo sapiens eukaryotic translation ... 34 0.24
BC063113-1|AAH63113.1| 382|Homo sapiens poly(A) binding protein... 34 0.32
AL662874-3|CAI41476.1| 218|Homo sapiens poly(A) binding protein... 34 0.32
AL662874-2|CAI41475.1| 382|Homo sapiens poly(A) binding protein... 34 0.32
AL122118-1|CAB59276.1| 367|Homo sapiens hypothetical protein pr... 34 0.32
AJ278963-1|CAC42826.1| 382|Homo sapiens Poly(A)-binding protein... 34 0.32
BT007367-1|AAP36031.1| 868|Homo sapiens programmed cell death 6... 33 0.55
BC068454-1|AAH68454.1| 873|Homo sapiens PDCD6IP protein protein. 33 0.55
BC020066-1|AAH20066.1| 868|Homo sapiens programmed cell death 6... 33 0.55
AK002122-1|BAA92092.1| 617|Homo sapiens protein ( Homo sapiens ... 33 0.55
AF349951-1|AAK20398.1| 868|Homo sapiens HP95 protein. 33 0.55
AB037796-1|BAA92613.1| 546|Homo sapiens KIAA1375 protein protein. 33 0.55
BC082241-1|AAH82241.1| 1179|Homo sapiens USP19 protein protein. 31 2.2
AB209510-1|BAD92747.1| 964|Homo sapiens EBNA-2 co-activator var... 31 2.2
AF250394-1|AAQ14260.1| 868|Homo sapiens dopamine receptor inter... 31 2.9
AF151793-1|AAF08220.1| 868|Homo sapiens ALG-2 interacting prote... 31 2.9
DQ846849-1|ABI15201.1| 111|Homo sapiens dopamine D4 receptor pr... 30 3.9
DQ314886-1|ABC40745.1| 828|Homo sapiens protein phosphatase 1, ... 30 3.9
BC142727-1|AAI42728.1| 1449|Homo sapiens USP19 protein protein. 30 3.9
BC142660-1|AAI42661.1| 1447|Homo sapiens USP19 protein protein. 30 3.9
BC106029-1|AAI06030.1| 799|Homo sapiens USP19 protein protein. 30 3.9
BC064913-1|AAH64913.1| 828|Homo sapiens protein phosphatase 1, ... 30 3.9
BC048269-1|AAH48269.1| 436|Homo sapiens USP19 protein protein. 30 3.9
BC032298-1|AAH32298.1| 828|Homo sapiens protein phosphatase 1, ... 30 3.9
AY869712-1|AAW51146.1| 827|Homo sapiens NFkB interacting protei... 30 3.9
AK130326-1|BAC85327.1| 508|Homo sapiens protein ( Homo sapiens ... 30 3.9
AJ888472-1|CAI60219.1| 828|Homo sapiens inhibitor of apoptosis ... 30 3.9
AJ606308-1|CAE54436.1| 4262|Homo sapiens secreted mucin MUC17 pr... 30 3.9
AJ606307-1|CAE54435.1| 4493|Homo sapiens membrane mucin MUC17 pr... 30 3.9
AB001025-1|BAA23795.1| 4866|Homo sapiens brain ryanodine recepto... 30 5.1
Y08806-1|CAA70044.1| 353|Homo sapiens EWS protein. 29 6.8
Y07848-1|CAA69177.1| 656|Homo sapiens RNA binding protein protein. 29 6.8
X72990-1|CAA51489.1| 656|Homo sapiens EWS protein. 29 6.8
X66899-1|CAA47350.1| 656|Homo sapiens RNA binding protein protein. 29 6.8
U35622-1|AAB03569.2| 478|Homo sapiens EWS protein/E1A enhancer ... 29 6.8
CR542037-1|CAG46834.1| 225|Homo sapiens BCAS2 protein. 29 6.8
CR456490-1|CAG30376.1| 655|Homo sapiens EWSR1 protein. 29 6.8
BT019390-1|AAV38197.1| 225|Homo sapiens breast carcinoma amplif... 29 6.8
BC094683-1|AAH94683.1| 1305|Homo sapiens EIF4G3 protein protein. 29 6.8
BC072442-1|AAH72442.1| 655|Homo sapiens Ewing sarcoma breakpoin... 29 6.8
BC054516-1|AAH54516.1| 666|Homo sapiens amyloid beta (A4) precu... 29 6.8
BC022880-1|AAH22880.1| 225|Homo sapiens breast carcinoma amplif... 29 6.8
BC012623-1|AAH12623.1| 225|Homo sapiens breast carcinoma amplif... 29 6.8
BC011048-1|AAH11048.1| 655|Homo sapiens Ewing sarcoma breakpoin... 29 6.8
BC005285-1|AAH05285.1| 225|Homo sapiens breast carcinoma amplif... 29 6.8
BC004817-1|AAH04817.1| 656|Homo sapiens Ewing sarcoma breakpoin... 29 6.8
BC000527-1|AAH00527.1| 354|Homo sapiens EWSR1 protein protein. 29 6.8
AL627311-4|CAI14555.1| 220|Homo sapiens eukaryotic translation ... 29 6.8
AL627311-3|CAI14554.1| 217|Homo sapiens eukaryotic translation ... 29 6.8
AL627311-2|CAI14553.1| 1585|Homo sapiens eukaryotic translation ... 29 6.8
AL606477-7|CAI12534.1| 1585|Homo sapiens eukaryotic translation ... 29 6.8
AL390241-7|CAI13553.1| 225|Homo sapiens breast carcinoma amplif... 29 6.8
AL358392-4|CAI12157.1| 220|Homo sapiens eukaryotic translation ... 29 6.8
AL358392-3|CAI12156.1| 217|Homo sapiens eukaryotic translation ... 29 6.8
AL358392-2|CAI12155.1| 1585|Homo sapiens eukaryotic translation ... 29 6.8
AL160287-2|CAH70339.1| 666|Homo sapiens amyloid beta (A4) precu... 29 6.8
AL031186-2|CAI18001.1| 656|Homo sapiens Ewing sarcoma breakpoin... 29 6.8
AK222637-1|BAD96357.1| 225|Homo sapiens breast carcinoma amplif... 29 6.8
AK056309-1|BAB71145.1| 661|Homo sapiens protein ( Homo sapiens ... 29 6.8
AF327066-1|AAK11227.1| 476|Homo sapiens Ewings sarcoma EWS-Fli1... 29 6.8
AF254088-1|AAG09037.1| 609|Homo sapiens EWS/ZSG fusion protein ... 29 6.8
AF254087-1|AAG09036.1| 713|Homo sapiens EWS/ZSG fusion protein ... 29 6.8
AF254086-1|AAG09035.1| 609|Homo sapiens EWS/ZSG fusion protein ... 29 6.8
AF081788-1|AAC64059.1| 225|Homo sapiens putative spliceosome as... 29 6.8
AF012072-1|AAC02903.2| 1585|Homo sapiens eIF4GII protein. 29 6.8
AB209119-1|BAD92356.1| 1780|Homo sapiens eukaryotic translation ... 29 6.8
AB085852-1|BAC41256.1| 666|Homo sapiens proline-rich protein 73... 29 6.8
AB020623-1|BAA34863.1| 225|Homo sapiens DAM1 protein. 29 6.8
Z48500-1|CAA88400.1| 273|Homo sapiens human mammary dihydrolipo... 29 9.0
Y00978-1|CAA68787.1| 615|Homo sapiens PDC-E2 precursor (AA -54 ... 29 9.0
L76191-1|AAC41949.1| 712|Homo sapiens interleukin-1 receptor-as... 29 9.0
J03866-1|AAA62253.1| 613|Homo sapiens dihydrolipoamide acetyltr... 29 9.0
DQ054788-1|AAY88246.1| 633|Homo sapiens interleukin-1 receptor ... 29 9.0
BC054000-1|AAH54000.1| 693|Homo sapiens IRAK1 protein protein. 29 9.0
BC039084-1|AAH39084.1| 647|Homo sapiens dihydrolipoamide S-acet... 29 9.0
BC014963-1|AAH14963.1| 633|Homo sapiens interleukin-1 receptor-... 29 9.0
AK223596-1|BAD97316.1| 647|Homo sapiens dihydrolipoamide S-acet... 29 9.0
AK126225-1|BAC86496.1| 139|Homo sapiens protein ( Homo sapiens ... 29 9.0
AJ001515-1|CAA04798.1| 4870|Homo sapiens ryanodine receptor 3 pr... 29 9.0
AF346607-1|AAK62888.1| 682|Homo sapiens interleukin-1 receptor ... 29 9.0
AF030876-1|AAC08756.1| 712|Homo sapiens Interleukin 1 receptor-... 29 9.0
>BC065540-1|AAH65540.1| 631|Homo sapiens PABPC4 protein protein.
Length = 631
Score = 95.1 bits (226), Expect = 1e-19
Identities = 66/171 (38%), Positives = 83/171 (48%), Gaps = 9/171 (5%)
Frame = +2
Query: 11 EMNGRIVGTKPLYVALAQRKEDRKAHLTXXXXXXXXXXXXXXXXXI---FQPSSAGGYFV 181
EMNGRIVG+KPLYVALAQRKE+RKAHLT I FQP +AGGYFV
Sbjct: 352 EMNGRIVGSKPLYVALAQRKEERKAHLTNQYMQRVAGMRALPANAILNQFQP-AAGGYFV 410
Query: 182 PTIPPAQ---RFYGPAQMPQIRPTPRWTAQPPVRPSTQTPASAYANMQXXXXXXXXXXXX 352
P +P AQ +Y P Q+ Q+RP PRW Q RP +
Sbjct: 411 PAVPQAQGRPPYYTPNQLAQMRPNPRW--QQGGRPQGFQGMPSAIRQSGPRPTLRHLAPT 468
Query: 353 XXXXTSLGARPITGQQGVAGTAGSI--RAPLVTQSSRP-AGYKYTANMRNP 496
S G T + GV ++ RA + + R A YKY +++R+P
Sbjct: 469 GNAPASRGLPTTTQRVGVPTAVQNLAPRAAVAAAAPRAVAPYKYASSVRSP 519
>AL365277-15|CAI16425.1| 410|Homo sapiens poly(A) binding protein,
cytoplasmic 4 (induciblela) protein.
Length = 410
Score = 95.1 bits (226), Expect = 1e-19
Identities = 66/171 (38%), Positives = 83/171 (48%), Gaps = 9/171 (5%)
Frame = +2
Query: 11 EMNGRIVGTKPLYVALAQRKEDRKAHLTXXXXXXXXXXXXXXXXXI---FQPSSAGGYFV 181
EMNGRIVG+KPLYVALAQRKE+RKAHLT I FQP +AGGYFV
Sbjct: 131 EMNGRIVGSKPLYVALAQRKEERKAHLTNQYMQRVAGMRALPANAILNQFQP-AAGGYFV 189
Query: 182 PTIPPAQ---RFYGPAQMPQIRPTPRWTAQPPVRPSTQTPASAYANMQXXXXXXXXXXXX 352
P +P AQ +Y P Q+ Q+RP PRW Q RP +
Sbjct: 190 PAVPQAQGRPPYYTPNQLAQMRPNPRW--QQGGRPQGFQGMPSAIRQSGPRPTLRHLAPT 247
Query: 353 XXXXTSLGARPITGQQGVAGTAGSI--RAPLVTQSSRP-AGYKYTANMRNP 496
S G T + GV ++ RA + + R A YKY +++R+P
Sbjct: 248 GNAPASRGLPTTTQRVGVPTAVQNLAPRAAVAAAAPRAVAPYKYASSVRSP 298
>Z48501-1|CAA88401.1| 522|Homo sapiens polyadenylate binding
protein II protein.
Length = 522
Score = 91.9 bits (218), Expect = 1e-18
Identities = 51/107 (47%), Positives = 62/107 (57%), Gaps = 10/107 (9%)
Frame = +2
Query: 11 EMNGRIVGTKPLYVALAQRKEDRKAHLTXXXXXXXXXXXXXXXXXI--FQPSSAGGYFVP 184
EMNGRIV TKPLYVALAQRKE+R+AHLT I +QP+ GYF+
Sbjct: 327 EMNGRIVATKPLYVALAQRKEERQAHLTNQYMQRMASVRAVPNPVINPYQPAPPSGYFIA 386
Query: 185 TIPPAQR---FYGPAQMPQIRPTPRWTAQ-----PPVRPSTQTPASA 301
IP Q +Y P+Q+ Q+RP+PRWTAQ P V Q P +A
Sbjct: 387 AIPQTQNRAAYYPPSQIAQLRPSPRWTAQGARPHPAVHVQGQEPLTA 433
>U75686-1|AAB97309.1| 644|Homo sapiens polyadenylate binding
protein protein.
Length = 644
Score = 91.9 bits (218), Expect = 1e-18
Identities = 49/87 (56%), Positives = 56/87 (64%), Gaps = 6/87 (6%)
Frame = +2
Query: 11 EMNGRIVGTKPLYVALAQRKEDRKAHLTXXXXXXXXXXXXXXXXXI---FQPSSAGGYFV 181
EMNGRIVG+KPLYVALAQRKE+RKAHLT I FQP +AGGYFV
Sbjct: 352 EMNGRIVGSKPLYVALAQRKEERKAHLTNQYMQRVAGMRALPANAILNQFQP-AAGGYFV 410
Query: 182 PTIPPAQ---RFYGPAQMPQIRPTPRW 253
P +P AQ +Y P Q+ Q+RP PRW
Sbjct: 411 PAVPQAQGRPPYYTPNQLAQMRPNPRW 437
>U33818-1|AAC50350.1| 644|Homo sapiens inducible poly(A)-binding
protein protein.
Length = 644
Score = 91.9 bits (218), Expect = 1e-18
Identities = 49/87 (56%), Positives = 56/87 (64%), Gaps = 6/87 (6%)
Frame = +2
Query: 11 EMNGRIVGTKPLYVALAQRKEDRKAHLTXXXXXXXXXXXXXXXXXI---FQPSSAGGYFV 181
EMNGRIVG+KPLYVALAQRKE+RKAHLT I FQP +AGGYFV
Sbjct: 352 EMNGRIVGSKPLYVALAQRKEERKAHLTNQYMQRVAGMRALPANAILNQFQP-AAGGYFV 410
Query: 182 PTIPPAQ---RFYGPAQMPQIRPTPRW 253
P +P AQ +Y P Q+ Q+RP PRW
Sbjct: 411 PAVPQAQGRPPYYTPNQLAQMRPNPRW 437
>BC118568-1|AAI18569.1| 252|Homo sapiens PABPC4 protein protein.
Length = 252
Score = 91.9 bits (218), Expect = 1e-18
Identities = 49/87 (56%), Positives = 56/87 (64%), Gaps = 6/87 (6%)
Frame = +2
Query: 11 EMNGRIVGTKPLYVALAQRKEDRKAHLTXXXXXXXXXXXXXXXXXI---FQPSSAGGYFV 181
EMNGRIVG+KPLYVALAQRKE+RKAHLT I FQP +AGGYFV
Sbjct: 102 EMNGRIVGSKPLYVALAQRKEERKAHLTNQYMQRVAGMRALPANAILNQFQP-AAGGYFV 160
Query: 182 PTIPPAQ---RFYGPAQMPQIRPTPRW 253
P +P AQ +Y P Q+ Q+RP PRW
Sbjct: 161 PAVPQAQGRPPYYTPNQLAQMRPNPRW 187
>BC106908-1|AAI06909.1| 281|Homo sapiens PABPC4 protein protein.
Length = 281
Score = 91.9 bits (218), Expect = 1e-18
Identities = 49/87 (56%), Positives = 56/87 (64%), Gaps = 6/87 (6%)
Frame = +2
Query: 11 EMNGRIVGTKPLYVALAQRKEDRKAHLTXXXXXXXXXXXXXXXXXI---FQPSSAGGYFV 181
EMNGRIVG+KPLYVALAQRKE+RKAHLT I FQP +AGGYFV
Sbjct: 102 EMNGRIVGSKPLYVALAQRKEERKAHLTNQYMQRVAGMRALPANAILNQFQP-AAGGYFV 160
Query: 182 PTIPPAQ---RFYGPAQMPQIRPTPRW 253
P +P AQ +Y P Q+ Q+RP PRW
Sbjct: 161 PAVPQAQGRPPYYTPNQLAQMRPNPRW 187
>BC094755-1|AAH94755.1| 660|Homo sapiens PABPC4 protein protein.
Length = 660
Score = 91.9 bits (218), Expect = 1e-18
Identities = 49/87 (56%), Positives = 56/87 (64%), Gaps = 6/87 (6%)
Frame = +2
Query: 11 EMNGRIVGTKPLYVALAQRKEDRKAHLTXXXXXXXXXXXXXXXXXI---FQPSSAGGYFV 181
EMNGRIVG+KPLYVALAQRKE+RKAHLT I FQP +AGGYFV
Sbjct: 352 EMNGRIVGSKPLYVALAQRKEERKAHLTNQYMQRVAGMRALPANAILNQFQP-AAGGYFV 410
Query: 182 PTIPPAQ---RFYGPAQMPQIRPTPRW 253
P +P AQ +Y P Q+ Q+RP PRW
Sbjct: 411 PAVPQAQGRPPYYTPNQLAQMRPNPRW 437
>BC071591-1|AAH71591.1| 660|Homo sapiens PABPC4 protein protein.
Length = 660
Score = 91.9 bits (218), Expect = 1e-18
Identities = 49/87 (56%), Positives = 56/87 (64%), Gaps = 6/87 (6%)
Frame = +2
Query: 11 EMNGRIVGTKPLYVALAQRKEDRKAHLTXXXXXXXXXXXXXXXXXI---FQPSSAGGYFV 181
EMNGRIVG+KPLYVALAQRKE+RKAHLT I FQP +AGGYFV
Sbjct: 352 EMNGRIVGSKPLYVALAQRKEERKAHLTNQYMQRVAGMRALPANAILNQFQP-AAGGYFV 410
Query: 182 PTIPPAQ---RFYGPAQMPQIRPTPRW 253
P +P AQ +Y P Q+ Q+RP PRW
Sbjct: 411 PAVPQAQGRPPYYTPNQLAQMRPNPRW 437
>AL845289-3|CAI12300.1| 644|Homo sapiens poly(A) binding protein,
cytoplasmic 4 (inducibletaining 6 protein.
Length = 644
Score = 91.9 bits (218), Expect = 1e-18
Identities = 49/87 (56%), Positives = 56/87 (64%), Gaps = 6/87 (6%)
Frame = +2
Query: 11 EMNGRIVGTKPLYVALAQRKEDRKAHLTXXXXXXXXXXXXXXXXXI---FQPSSAGGYFV 181
EMNGRIVG+KPLYVALAQRKE+RKAHLT I FQP +AGGYFV
Sbjct: 352 EMNGRIVGSKPLYVALAQRKEERKAHLTNQYMQRVAGMRALPANAILNQFQP-AAGGYFV 410
Query: 182 PTIPPAQ---RFYGPAQMPQIRPTPRW 253
P +P AQ +Y P Q+ Q+RP PRW
Sbjct: 411 PAVPQAQGRPPYYTPNQLAQMRPNPRW 437
>AL845289-2|CAI12298.1| 660|Homo sapiens poly(A) binding protein,
cytoplasmic 4 (inducibleseudogene protein.
Length = 660
Score = 91.9 bits (218), Expect = 1e-18
Identities = 49/87 (56%), Positives = 56/87 (64%), Gaps = 6/87 (6%)
Frame = +2
Query: 11 EMNGRIVGTKPLYVALAQRKEDRKAHLTXXXXXXXXXXXXXXXXXI---FQPSSAGGYFV 181
EMNGRIVG+KPLYVALAQRKE+RKAHLT I FQP +AGGYFV
Sbjct: 352 EMNGRIVGSKPLYVALAQRKEERKAHLTNQYMQRVAGMRALPANAILNQFQP-AAGGYFV 410
Query: 182 PTIPPAQ---RFYGPAQMPQIRPTPRW 253
P +P AQ +Y P Q+ Q+RP PRW
Sbjct: 411 PAVPQAQGRPPYYTPNQLAQMRPNPRW 437
>AL845289-1|CAI12299.1| 615|Homo sapiens poly(A) binding protein,
cytoplasmic 4 (inducibleeudogene protein.
Length = 615
Score = 91.9 bits (218), Expect = 1e-18
Identities = 49/87 (56%), Positives = 56/87 (64%), Gaps = 6/87 (6%)
Frame = +2
Query: 11 EMNGRIVGTKPLYVALAQRKEDRKAHLTXXXXXXXXXXXXXXXXXI---FQPSSAGGYFV 181
EMNGRIVG+KPLYVALAQRKE+RKAHLT I FQP +AGGYFV
Sbjct: 352 EMNGRIVGSKPLYVALAQRKEERKAHLTNQYMQRVAGMRALPANAILNQFQP-AAGGYFV 410
Query: 182 PTIPPAQ---RFYGPAQMPQIRPTPRW 253
P +P AQ +Y P Q+ Q+RP PRW
Sbjct: 411 PAVPQAQGRPPYYTPNQLAQMRPNPRW 437
>AL365277-4|CAI16414.1| 644|Homo sapiens poly(A) binding protein,
cytoplasmic 4 (induciblepeptide, antigen CD29 includes
protein.
Length = 644
Score = 91.9 bits (218), Expect = 1e-18
Identities = 49/87 (56%), Positives = 56/87 (64%), Gaps = 6/87 (6%)
Frame = +2
Query: 11 EMNGRIVGTKPLYVALAQRKEDRKAHLTXXXXXXXXXXXXXXXXXI---FQPSSAGGYFV 181
EMNGRIVG+KPLYVALAQRKE+RKAHLT I FQP +AGGYFV
Sbjct: 352 EMNGRIVGSKPLYVALAQRKEERKAHLTNQYMQRVAGMRALPANAILNQFQP-AAGGYFV 410
Query: 182 PTIPPAQ---RFYGPAQMPQIRPTPRW 253
P +P AQ +Y P Q+ Q+RP PRW
Sbjct: 411 PAVPQAQGRPPYYTPNQLAQMRPNPRW 437
>AL365277-3|CAI16412.1| 660|Homo sapiens poly(A) binding protein,
cytoplasmic 4 (inducible) pseudogene protein.
Length = 660
Score = 91.9 bits (218), Expect = 1e-18
Identities = 49/87 (56%), Positives = 56/87 (64%), Gaps = 6/87 (6%)
Frame = +2
Query: 11 EMNGRIVGTKPLYVALAQRKEDRKAHLTXXXXXXXXXXXXXXXXXI---FQPSSAGGYFV 181
EMNGRIVG+KPLYVALAQRKE+RKAHLT I FQP +AGGYFV
Sbjct: 352 EMNGRIVGSKPLYVALAQRKEERKAHLTNQYMQRVAGMRALPANAILNQFQP-AAGGYFV 410
Query: 182 PTIPPAQ---RFYGPAQMPQIRPTPRW 253
P +P AQ +Y P Q+ Q+RP PRW
Sbjct: 411 PAVPQAQGRPPYYTPNQLAQMRPNPRW 437
>AL365277-2|CAI16413.1| 615|Homo sapiens poly(A) binding protein,
cytoplasmic 4 (induciblely, member 5 protein.
Length = 615
Score = 91.9 bits (218), Expect = 1e-18
Identities = 49/87 (56%), Positives = 56/87 (64%), Gaps = 6/87 (6%)
Frame = +2
Query: 11 EMNGRIVGTKPLYVALAQRKEDRKAHLTXXXXXXXXXXXXXXXXXI---FQPSSAGGYFV 181
EMNGRIVG+KPLYVALAQRKE+RKAHLT I FQP +AGGYFV
Sbjct: 352 EMNGRIVGSKPLYVALAQRKEERKAHLTNQYMQRVAGMRALPANAILNQFQP-AAGGYFV 410
Query: 182 PTIPPAQ---RFYGPAQMPQIRPTPRW 253
P +P AQ +Y P Q+ Q+RP PRW
Sbjct: 411 PAVPQAQGRPPYYTPNQLAQMRPNPRW 437
>AK222917-1|BAD96637.1| 371|Homo sapiens PABPC4 protein variant
protein.
Length = 371
Score = 91.9 bits (218), Expect = 1e-18
Identities = 49/87 (56%), Positives = 56/87 (64%), Gaps = 6/87 (6%)
Frame = +2
Query: 11 EMNGRIVGTKPLYVALAQRKEDRKAHLTXXXXXXXXXXXXXXXXXI---FQPSSAGGYFV 181
EMNGRIVG+KPLYVALAQRKE+RKAHLT I FQP +AGGYFV
Sbjct: 63 EMNGRIVGSKPLYVALAQRKEERKAHLTNQYMQRVAGMRALPANAILNQFQP-AAGGYFV 121
Query: 182 PTIPPAQ---RFYGPAQMPQIRPTPRW 253
P +P AQ +Y P Q+ Q+RP PRW
Sbjct: 122 PAVPQAQGRPPYYTPNQLAQMRPNPRW 148
>AB208962-1|BAD92199.1| 358|Homo sapiens PABPC4 protein variant
protein.
Length = 358
Score = 91.9 bits (218), Expect = 1e-18
Identities = 49/87 (56%), Positives = 56/87 (64%), Gaps = 6/87 (6%)
Frame = +2
Query: 11 EMNGRIVGTKPLYVALAQRKEDRKAHLTXXXXXXXXXXXXXXXXXI---FQPSSAGGYFV 181
EMNGRIVG+KPLYVALAQRKE+RKAHLT I FQP +AGGYFV
Sbjct: 50 EMNGRIVGSKPLYVALAQRKEERKAHLTNQYMQRVAGMRALPANAILNQFQP-AAGGYFV 108
Query: 182 PTIPPAQ---RFYGPAQMPQIRPTPRW 253
P +P AQ +Y P Q+ Q+RP PRW
Sbjct: 109 PAVPQAQGRPPYYTPNQLAQMRPNPRW 135
>Y00345-1|CAA68428.1| 633|Homo sapiens protein ( Human mRNA for
polyA binding protein. ).
Length = 633
Score = 90.6 bits (215), Expect = 3e-18
Identities = 60/169 (35%), Positives = 74/169 (43%), Gaps = 7/169 (4%)
Frame = +2
Query: 11 EMNGRIVGTKPLYVALAQRKEDRKAHLTXXXXXXXXXXXXXXXXXI--FQPSSAGGYFVP 184
EMNGRIV TKPLYVALAQRKE+R+AHLT I +QP+ GYF+
Sbjct: 349 EMNGRIVATKPLYVALAQRKEERQAHLTNQYMQRMASVRAVPNPVINPYQPAPPSGYFMA 408
Query: 185 TIPPAQR---FYGPAQMPQIRPTPRWTAQ-PPVRPSTQTPASAYANMQXXXXXXXXXXXX 352
IP Q +Y P+Q+ Q+RP+PRWTAQ P P +
Sbjct: 409 AIPQTQNRAAYYPPSQVAQLRPSPRWTAQGARPHPFQNMPGAIRPAAPRPPFSTMRPASS 468
Query: 353 XXXXTSLGARPITGQQGVAGTAGSIRAPLVTQSSRPA-GYKYTANMRNP 496
R G + A T + R YKY A +RNP
Sbjct: 469 QVPRVMSTQRVANTSTQTMGPRPAAAAAAATPAVRTVPQYKYAAGVRNP 517
>U68104-1|AAD08718.1| 636|Homo sapiens poly(A)-binding protein
protein.
Length = 636
Score = 90.6 bits (215), Expect = 3e-18
Identities = 60/169 (35%), Positives = 74/169 (43%), Gaps = 7/169 (4%)
Frame = +2
Query: 11 EMNGRIVGTKPLYVALAQRKEDRKAHLTXXXXXXXXXXXXXXXXXI--FQPSSAGGYFVP 184
EMNGRIV TKPLYVALAQRKE+R+AHLT I +QP+ GYF+
Sbjct: 352 EMNGRIVATKPLYVALAQRKEERQAHLTNQYMQRMASVRAVPNPVINPYQPAPPSGYFMA 411
Query: 185 TIPPAQR---FYGPAQMPQIRPTPRWTAQ-PPVRPSTQTPASAYANMQXXXXXXXXXXXX 352
IP Q +Y P+Q+ Q+RP+PRWTAQ P P +
Sbjct: 412 AIPQTQNRAAYYPPSQIAQLRPSPRWTAQGARPHPFQNMPGAIRPAAPRPPFSTMRPASS 471
Query: 353 XXXXTSLGARPITGQQGVAGTAGSIRAPLVTQSSRPA-GYKYTANMRNP 496
R G + A T + R YKY A +RNP
Sbjct: 472 QVPRVMSTQRVANTSTQTMGPRPAAAAAAATPAVRTVPQYKYAAGVRNP 520
>BC041863-1|AAH41863.1| 636|Homo sapiens poly(A) binding protein,
cytoplasmic 1 protein.
Length = 636
Score = 90.6 bits (215), Expect = 3e-18
Identities = 60/169 (35%), Positives = 74/169 (43%), Gaps = 7/169 (4%)
Frame = +2
Query: 11 EMNGRIVGTKPLYVALAQRKEDRKAHLTXXXXXXXXXXXXXXXXXI--FQPSSAGGYFVP 184
EMNGRIV TKPLYVALAQRKE+R+AHLT I +QP+ GYF+
Sbjct: 352 EMNGRIVATKPLYVALAQRKEERQAHLTNQYMQRMASVRAVPNPVINPYQPAPPSGYFMA 411
Query: 185 TIPPAQR---FYGPAQMPQIRPTPRWTAQ-PPVRPSTQTPASAYANMQXXXXXXXXXXXX 352
IP Q +Y P+Q+ Q+RP+PRWTAQ P P +
Sbjct: 412 AIPQTQNRAAYYPPSQIAQLRPSPRWTAQGARPHPFQNMPGAIRPAAPRPPFSTMRPASS 471
Query: 353 XXXXTSLGARPITGQQGVAGTAGSIRAPLVTQSSRPA-GYKYTANMRNP 496
R G + A T + R YKY A +RNP
Sbjct: 472 QVPRVMSTQRVANTSTQTMGPRPAAAAAAATPAVRTVPQYKYAAGVRNP 520
>BC023520-1|AAH23520.1| 636|Homo sapiens poly(A) binding protein,
cytoplasmic 1 protein.
Length = 636
Score = 90.6 bits (215), Expect = 3e-18
Identities = 60/169 (35%), Positives = 74/169 (43%), Gaps = 7/169 (4%)
Frame = +2
Query: 11 EMNGRIVGTKPLYVALAQRKEDRKAHLTXXXXXXXXXXXXXXXXXI--FQPSSAGGYFVP 184
EMNGRIV TKPLYVALAQRKE+R+AHLT I +QP+ GYF+
Sbjct: 352 EMNGRIVATKPLYVALAQRKEERQAHLTNQYMQRMASVRAVPNPVINPYQPAPPSGYFMA 411
Query: 185 TIPPAQR---FYGPAQMPQIRPTPRWTAQ-PPVRPSTQTPASAYANMQXXXXXXXXXXXX 352
IP Q +Y P+Q+ Q+RP+PRWTAQ P P +
Sbjct: 412 AIPQTQNRAAYYPPSQIAQLRPSPRWTAQGARPHPFQNMPGAIRPAAPRPPFSTMRPASS 471
Query: 353 XXXXTSLGARPITGQQGVAGTAGSIRAPLVTQSSRPA-GYKYTANMRNP 496
R G + A T + R YKY A +RNP
Sbjct: 472 QVPRVMSTQRVANTSTQTMGPRPAAAAAAATPAVRTVPQYKYAAGVRNP 520
>BC015958-1|AAH15958.1| 636|Homo sapiens PABPC1 protein protein.
Length = 636
Score = 90.6 bits (215), Expect = 3e-18
Identities = 60/169 (35%), Positives = 74/169 (43%), Gaps = 7/169 (4%)
Frame = +2
Query: 11 EMNGRIVGTKPLYVALAQRKEDRKAHLTXXXXXXXXXXXXXXXXXI--FQPSSAGGYFVP 184
EMNGRIV TKPLYVALAQRKE+R+AHLT I +QP+ GYF+
Sbjct: 352 EMNGRIVATKPLYVALAQRKEERQAHLTNQYMQRMASVRAVPNPVINPYQPAPPSGYFMA 411
Query: 185 TIPPAQR---FYGPAQMPQIRPTPRWTAQ-PPVRPSTQTPASAYANMQXXXXXXXXXXXX 352
IP Q +Y P+Q+ Q+RP+PRWTAQ P P +
Sbjct: 412 AIPQTQNRAAYYPPSQIAQLRPSPRWTAQGARPHPFQNMPGAIRPAAPRPPFSTMRPASS 471
Query: 353 XXXXTSLGARPITGQQGVAGTAGSIRAPLVTQSSRPA-GYKYTANMRNP 496
R G + A T + R YKY A +RNP
Sbjct: 472 QVPRVMSTQRVANTSTQTMGPRPAAAAAAATPAVRTVPQYKYAAGVRNP 520
>AF132026-1|AAG38953.1| 631|Homo sapiens testis-specific
poly(A)-binding protein protein.
Length = 631
Score = 84.2 bits (199), Expect = 2e-16
Identities = 58/168 (34%), Positives = 76/168 (45%), Gaps = 6/168 (3%)
Frame = +2
Query: 11 EMNGRIVGTKPLYVALAQRKEDRKAHLTXXXXXXXXXXXXXXXXXIFQPSSAGGYFVPTI 190
EMNGRIV TKPLYVALAQRKE+R+A+LT Q + GYF+ +
Sbjct: 352 EMNGRIVATKPLYVALAQRKEERQAYLTNEYMQRMASVRAVPN----QRAPPSGYFMTAV 407
Query: 191 PPAQR---FYGPAQMPQIRPTPRWTAQPPVRPSTQTPASAYANMQXXXXXXXXXXXXXXX 361
P Q +Y P+Q+ ++RP+PRWTAQ Q SA
Sbjct: 408 PQTQNHAAYYPPSQIARLRPSPRWTAQGARPHPFQNKPSAIRPGAPRVPFSTMRPASSQV 467
Query: 362 XTSLGARPI--TGQQGVAGTAGSIRAPLVTQSSRPA-GYKYTANMRNP 496
+ + + T Q V + RA T + R YKY A +RNP
Sbjct: 468 PRVMSTQRVANTSTQTVGPRPAAARAAAATPAVRTVPRYKYAAGVRNP 515
>AL109839-1|CAI95631.1| 614|Homo sapiens chromosome 20 open reading
frame 119 protein.
Length = 614
Score = 83.8 bits (198), Expect = 3e-16
Identities = 46/93 (49%), Positives = 54/93 (58%), Gaps = 3/93 (3%)
Frame = +2
Query: 11 EMNGRIVGTKPLYVALAQRKEDRKAHLTXXXXXXXXXXXXXXXXXIFQPSSAGGYFVPTI 190
EMNGRIVGTKPLYVALAQRKE+RKA LT + YF+P +
Sbjct: 352 EMNGRIVGTKPLYVALAQRKEERKAILTNQYMQRLSTMRTLSNPLLGSFQQPSSYFLPAM 411
Query: 191 --PPAQ-RFYGPAQMPQIRPTPRWTAQPPVRPS 280
PPAQ +YG + +P PRWT+QPP RPS
Sbjct: 412 PQPPAQAAYYGCGPVTPTQPAPRWTSQPP-RPS 443
>AL008725-4|CAI95662.1| 614|Homo sapiens chromosome 20 open reading
frame 119 protein.
Length = 614
Score = 83.8 bits (198), Expect = 3e-16
Identities = 46/93 (49%), Positives = 54/93 (58%), Gaps = 3/93 (3%)
Frame = +2
Query: 11 EMNGRIVGTKPLYVALAQRKEDRKAHLTXXXXXXXXXXXXXXXXXIFQPSSAGGYFVPTI 190
EMNGRIVGTKPLYVALAQRKE+RKA LT + YF+P +
Sbjct: 352 EMNGRIVGTKPLYVALAQRKEERKAILTNQYMQRLSTMRTLSNPLLGSFQQPSSYFLPAM 411
Query: 191 --PPAQ-RFYGPAQMPQIRPTPRWTAQPPVRPS 280
PPAQ +YG + +P PRWT+QPP RPS
Sbjct: 412 PQPPAQAAYYGCGPVTPTQPAPRWTSQPP-RPS 443
>DQ120640-1|ABB92425.1| 630|Homo sapiens PABP3 protein.
Length = 630
Score = 81.8 bits (193), Expect = 1e-15
Identities = 57/168 (33%), Positives = 75/168 (44%), Gaps = 6/168 (3%)
Frame = +2
Query: 11 EMNGRIVGTKPLYVALAQRKEDRKAHLTXXXXXXXXXXXXXXXXXIFQPSSAGGYFVPTI 190
EMNGRIV TKPLYVALAQRKE+R+A+LT Q + GYF+ +
Sbjct: 352 EMNGRIVATKPLYVALAQRKEERQAYLTNEYMQRMASVRAVPN----QRAPPSGYFMTAV 407
Query: 191 PPAQR---FYGPAQMPQIRPTPRWTAQPPVRPSTQTPASAYANMQXXXXXXXXXXXXXXX 361
P Q +Y P+Q+ ++RP+PRWTAQ Q SA
Sbjct: 408 PQTQNHAAYYPPSQIARLRPSPRWTAQGARPHPFQNKPSAIRPGAPRVPFSTMRPASSQV 467
Query: 362 XTSLGARPI--TGQQGVAGTAGSIRAPLVTQSSRPA-GYKYTANMRNP 496
+ + + T Q V + A T + R YKY A +RNP
Sbjct: 468 PRVMSTQRVANTSTQTVGPRPAAAAAAAATPAVRTVPRYKYAAGVRNP 515
>BC027617-1|AAH27617.1| 631|Homo sapiens poly(A) binding protein,
cytoplasmic 3 protein.
Length = 631
Score = 81.8 bits (193), Expect = 1e-15
Identities = 57/168 (33%), Positives = 75/168 (44%), Gaps = 6/168 (3%)
Frame = +2
Query: 11 EMNGRIVGTKPLYVALAQRKEDRKAHLTXXXXXXXXXXXXXXXXXIFQPSSAGGYFVPTI 190
EMNGRIV TKPLYVALAQRKE+R+A+LT Q + GYF+ +
Sbjct: 352 EMNGRIVATKPLYVALAQRKEERQAYLTNEYMQRMASVRAVPN----QRAPPSGYFMTAV 407
Query: 191 PPAQR---FYGPAQMPQIRPTPRWTAQPPVRPSTQTPASAYANMQXXXXXXXXXXXXXXX 361
P Q +Y P+Q+ ++RP+PRWTAQ Q SA
Sbjct: 408 PQTQNHAAYYPPSQIARLRPSPRWTAQGARPHPFQNKPSAIRPGAPRVPFSTMRPASSQV 467
Query: 362 XTSLGARPI--TGQQGVAGTAGSIRAPLVTQSSRPA-GYKYTANMRNP 496
+ + + T Q V + A T + R YKY A +RNP
Sbjct: 468 PRVMSTQRVANTSTQTVGPRPAAAAAAAATPAVRTVPRYKYAAGVRNP 515
>AL359757-1|CAH70805.1| 631|Homo sapiens poly(A) binding protein,
cytoplasmic 3 protein.
Length = 631
Score = 81.8 bits (193), Expect = 1e-15
Identities = 57/168 (33%), Positives = 75/168 (44%), Gaps = 6/168 (3%)
Frame = +2
Query: 11 EMNGRIVGTKPLYVALAQRKEDRKAHLTXXXXXXXXXXXXXXXXXIFQPSSAGGYFVPTI 190
EMNGRIV TKPLYVALAQRKE+R+A+LT Q + GYF+ +
Sbjct: 352 EMNGRIVATKPLYVALAQRKEERQAYLTNEYMQRMASVRAVPN----QRAPPSGYFMTAV 407
Query: 191 PPAQR---FYGPAQMPQIRPTPRWTAQPPVRPSTQTPASAYANMQXXXXXXXXXXXXXXX 361
P Q +Y P+Q+ ++RP+PRWTAQ Q SA
Sbjct: 408 PQTQNHAAYYPPSQIARLRPSPRWTAQGARPHPFQNKPSAIRPGAPRVPFSTMRPASSQV 467
Query: 362 XTSLGARPI--TGQQGVAGTAGSIRAPLVTQSSRPA-GYKYTANMRNP 496
+ + + T Q V + A T + R YKY A +RNP
Sbjct: 468 PRVMSTQRVANTSTQTVGPRPAAAAAAAATPAVRTVPRYKYAAGVRNP 515
>BC045608-1|AAH45608.1| 631|Homo sapiens poly(A) binding protein,
cytoplasmic 3 protein.
Length = 631
Score = 78.6 bits (185), Expect = 1e-14
Identities = 56/168 (33%), Positives = 74/168 (44%), Gaps = 6/168 (3%)
Frame = +2
Query: 11 EMNGRIVGTKPLYVALAQRKEDRKAHLTXXXXXXXXXXXXXXXXXIFQPSSAGGYFVPTI 190
EMNGRIV TKPLYVALAQRKE+R+A+LT Q + GYF+ +
Sbjct: 352 EMNGRIVATKPLYVALAQRKEERQAYLTNEYMQRMASVRAVPN----QRAPPSGYFMTAV 407
Query: 191 PPAQR---FYGPAQMPQIRPTPRWTAQPPVRPSTQTPASAYANMQXXXXXXXXXXXXXXX 361
Q +Y P+Q+ ++RP+PRWTAQ Q SA
Sbjct: 408 TQTQNHAAYYPPSQIARLRPSPRWTAQGARPHPFQNKPSAIRPGAPRVPFSTMRPASSQV 467
Query: 362 XTSLGARPI--TGQQGVAGTAGSIRAPLVTQSSRPA-GYKYTANMRNP 496
+ + + T Q V + A T + R YKY A +RNP
Sbjct: 468 PRVMSTQRVANTSTQTVGPRPAAAAAAAATPAVRTVPRYKYAAGVRNP 515
>BC068242-1|AAH68242.1| 269|Homo sapiens LOC728773 protein protein.
Length = 269
Score = 68.9 bits (161), Expect = 9e-12
Identities = 40/93 (43%), Positives = 50/93 (53%), Gaps = 5/93 (5%)
Frame = +2
Query: 14 MNGRIVGTKPLYVALAQRKEDRKAHLTXXXXXXXXXXXXXXXXXI--FQPSSAGGYFVPT 187
MNG+IV +KPL+VALAQ KE R AH T I +QP+ + YFV
Sbjct: 173 MNGKIVASKPLHVALAQCKEQRLAHFTNQYMQKMASVRAVPHPVINPYQPAPSTCYFVAA 232
Query: 188 IPPAQR---FYGPAQMPQIRPTPRWTAQPPVRP 277
IP Q +Y P Q+ Q+RP+P W Q VRP
Sbjct: 233 IPQTQNRAAYYPPGQIAQLRPSPPWAVQ-SVRP 264
>D12799-1|BAA02244.1| 193|Homo sapiens polyadenylate binding
protein II protein.
Length = 193
Score = 58.0 bits (134), Expect = 2e-08
Identities = 26/28 (92%), Positives = 28/28 (100%)
Frame = +2
Query: 11 EMNGRIVGTKPLYVALAQRKEDRKAHLT 94
EMNGRIVG+KPLYVALAQRKE+RKAHLT
Sbjct: 163 EMNGRIVGSKPLYVALAQRKEERKAHLT 190
>BX537907-1|CAD97892.1| 372|Homo sapiens hypothetical protein
protein.
Length = 372
Score = 36.3 bits (80), Expect = 0.059
Identities = 17/45 (37%), Positives = 23/45 (51%)
Frame = +2
Query: 182 PTIPPAQRFYGPAQMPQIRPTPRWTAQPPVRPSTQTPASAYANMQ 316
PT PPAQ P P P+ +A PP P+T+ P S ++Q
Sbjct: 327 PTEPPAQSSTEPPAEPPTAPSAELSAGPPAEPATEPPPSPGHSLQ 371
>BC012055-1|AAH12055.1| 384|Homo sapiens aryl hydrocarbon receptor
interacting protein-like 1 protein.
Length = 384
Score = 36.3 bits (80), Expect = 0.059
Identities = 17/45 (37%), Positives = 23/45 (51%)
Frame = +2
Query: 182 PTIPPAQRFYGPAQMPQIRPTPRWTAQPPVRPSTQTPASAYANMQ 316
PT PPAQ P P P+ +A PP P+T+ P S ++Q
Sbjct: 339 PTEPPAQSSTEPPAEPPTAPSAELSAGPPAEPATEPPPSPGHSLQ 383
>AK023970-1|BAB14744.1| 384|Homo sapiens protein ( Homo sapiens
cDNA FLJ13908 fis, clone Y79AA1000059, highly similar to
Homo sapiens aryl-hydrocarbon interacting protein-like 1
(AIPL1) gene. ).
Length = 384
Score = 36.3 bits (80), Expect = 0.059
Identities = 17/45 (37%), Positives = 23/45 (51%)
Frame = +2
Query: 182 PTIPPAQRFYGPAQMPQIRPTPRWTAQPPVRPSTQTPASAYANMQ 316
PT PPAQ P P P+ +A PP P+T+ P S ++Q
Sbjct: 339 PTEPPAQSSTEPPAEPPTAPSAELSAGPPAEPATEPPPSPGHSLQ 383
>AJ830743-1|CAH25996.1| 360|Homo sapiens aryl hydrocarbon receptor
interacting protein-like 1 protein.
Length = 360
Score = 36.3 bits (80), Expect = 0.059
Identities = 17/45 (37%), Positives = 23/45 (51%)
Frame = +2
Query: 182 PTIPPAQRFYGPAQMPQIRPTPRWTAQPPVRPSTQTPASAYANMQ 316
PT PPAQ P P P+ +A PP P+T+ P S ++Q
Sbjct: 315 PTEPPAQSSTEPPAEPPTAPSAELSAGPPAEPATEPPPSPGHSLQ 359
>AJ830742-1|CAH25995.1| 362|Homo sapiens aryl hydrocarbon receptor
interacting protein-like 1 protein.
Length = 362
Score = 36.3 bits (80), Expect = 0.059
Identities = 17/45 (37%), Positives = 23/45 (51%)
Frame = +2
Query: 182 PTIPPAQRFYGPAQMPQIRPTPRWTAQPPVRPSTQTPASAYANMQ 316
PT PPAQ P P P+ +A PP P+T+ P S ++Q
Sbjct: 317 PTEPPAQSSTEPPAEPPTAPSAELSAGPPAEPATEPPPSPGHSLQ 361
>AJ633678-1|CAG17883.1| 321|Homo sapiens aryl hydrocarbon receptor
interacting protein-like 1 protein.
Length = 321
Score = 36.3 bits (80), Expect = 0.059
Identities = 17/45 (37%), Positives = 23/45 (51%)
Frame = +2
Query: 182 PTIPPAQRFYGPAQMPQIRPTPRWTAQPPVRPSTQTPASAYANMQ 316
PT PPAQ P P P+ +A PP P+T+ P S ++Q
Sbjct: 276 PTEPPAQSSTEPPAEPPTAPSAELSAGPPAEPATEPPPSPGHSLQ 320
>AJ633677-1|CAG17882.1| 324|Homo sapiens aryl hydrocarbon receptor
interacting protein-like 1 protein.
Length = 324
Score = 36.3 bits (80), Expect = 0.059
Identities = 17/45 (37%), Positives = 23/45 (51%)
Frame = +2
Query: 182 PTIPPAQRFYGPAQMPQIRPTPRWTAQPPVRPSTQTPASAYANMQ 316
PT PPAQ P P P+ +A PP P+T+ P S ++Q
Sbjct: 279 PTEPPAQSSTEPPAEPPTAPSAELSAGPPAEPATEPPPSPGHSLQ 323
>AF525970-1|AAM88405.1| 321|Homo sapiens aryl hydrocarbon
receptor-interacting protein-like 2 protein.
Length = 321
Score = 36.3 bits (80), Expect = 0.059
Identities = 17/45 (37%), Positives = 23/45 (51%)
Frame = +2
Query: 182 PTIPPAQRFYGPAQMPQIRPTPRWTAQPPVRPSTQTPASAYANMQ 316
PT PPAQ P P P+ +A PP P+T+ P S ++Q
Sbjct: 276 PTEPPAQSSTEPPAEPPTAPSAELSAGPPAEPATEPPPSPGHSLQ 320
>AF180472-1|AAF26708.1| 384|Homo sapiens aryl-hydrocarbon
interacting protein-like 1 protein.
Length = 384
Score = 36.3 bits (80), Expect = 0.059
Identities = 17/45 (37%), Positives = 23/45 (51%)
Frame = +2
Query: 182 PTIPPAQRFYGPAQMPQIRPTPRWTAQPPVRPSTQTPASAYANMQ 316
PT PPAQ P P P+ +A PP P+T+ P S ++Q
Sbjct: 339 PTEPPAQSSTEPPAEPPTAPSAELSAGPPAEPATEPPPSPGHSLQ 383
>AF148864-1|AAF74023.1| 384|Homo sapiens aryl-hydrocarbon
interacting protein-like-1 protein.
Length = 384
Score = 36.3 bits (80), Expect = 0.059
Identities = 17/45 (37%), Positives = 23/45 (51%)
Frame = +2
Query: 182 PTIPPAQRFYGPAQMPQIRPTPRWTAQPPVRPSTQTPASAYANMQ 316
PT PPAQ P P P+ +A PP P+T+ P S ++Q
Sbjct: 339 PTEPPAQSSTEPPAEPPTAPSAELSAGPPAEPATEPPPSPGHSLQ 383
>BC030578-1|AAH30578.1| 515|Homo sapiens EIF4G3 protein protein.
Length = 515
Score = 34.3 bits (75), Expect = 0.24
Identities = 20/54 (37%), Positives = 28/54 (51%), Gaps = 3/54 (5%)
Frame = +2
Query: 152 QPSSAGGYFVPTIPPAQRFYGPAQMPQIRPTPRWT---AQPPVRPSTQTPASAY 304
QP + + PP +F+ Q PQI+P PR T + P +RP QTP + Y
Sbjct: 4 QPQTRSPFAAGPRPPHHQFF---QRPQIQP-PRATIPNSSPSIRPGAQTPTAVY 53
>AL672037-2|CAI16194.1| 630|Homo sapiens eukaryotic translation
initiation factor 4 gamma,udogene 1 protein.
Length = 630
Score = 34.3 bits (75), Expect = 0.24
Identities = 20/54 (37%), Positives = 28/54 (51%), Gaps = 3/54 (5%)
Frame = +2
Query: 152 QPSSAGGYFVPTIPPAQRFYGPAQMPQIRPTPRWT---AQPPVRPSTQTPASAY 304
QP + + PP +F+ Q PQI+P PR T + P +RP QTP + Y
Sbjct: 119 QPQTRSPFAAGPRPPHHQFF---QRPQIQP-PRATIPNSSPSIRPGAQTPTAVY 168
>AL627311-1|CAI14552.1| 630|Homo sapiens eukaryotic translation
initiation factor 4 gamma,-Asp/His) box polypeptide 11 (
protein.
Length = 630
Score = 34.3 bits (75), Expect = 0.24
Identities = 20/54 (37%), Positives = 28/54 (51%), Gaps = 3/54 (5%)
Frame = +2
Query: 152 QPSSAGGYFVPTIPPAQRFYGPAQMPQIRPTPRWT---AQPPVRPSTQTPASAY 304
QP + + PP +F+ Q PQI+P PR T + P +RP QTP + Y
Sbjct: 119 QPQTRSPFAAGPRPPHHQFF---QRPQIQP-PRATIPNSSPSIRPGAQTPTAVY 168
>AL358392-1|CAI12154.1| 630|Homo sapiens eukaryotic translation
initiation factor 4 gamma,e protein.
Length = 630
Score = 34.3 bits (75), Expect = 0.24
Identities = 20/54 (37%), Positives = 28/54 (51%), Gaps = 3/54 (5%)
Frame = +2
Query: 152 QPSSAGGYFVPTIPPAQRFYGPAQMPQIRPTPRWT---AQPPVRPSTQTPASAY 304
QP + + PP +F+ Q PQI+P PR T + P +RP QTP + Y
Sbjct: 119 QPQTRSPFAAGPRPPHHQFF---QRPQIQP-PRATIPNSSPSIRPGAQTPTAVY 168
>BC063113-1|AAH63113.1| 382|Homo sapiens poly(A) binding protein,
cytoplasmic 5 protein.
Length = 382
Score = 33.9 bits (74), Expect = 0.32
Identities = 14/20 (70%), Positives = 17/20 (85%)
Frame = +2
Query: 11 EMNGRIVGTKPLYVALAQRK 70
EMNGRIVG+KPL+V L Q +
Sbjct: 360 EMNGRIVGSKPLHVTLGQAR 379
>AL662874-3|CAI41476.1| 218|Homo sapiens poly(A) binding protein,
cytoplasmic 5 protein.
Length = 218
Score = 33.9 bits (74), Expect = 0.32
Identities = 14/20 (70%), Positives = 17/20 (85%)
Frame = +2
Query: 11 EMNGRIVGTKPLYVALAQRK 70
EMNGRIVG+KPL+V L Q +
Sbjct: 196 EMNGRIVGSKPLHVTLGQAR 215
>AL662874-2|CAI41475.1| 382|Homo sapiens poly(A) binding protein,
cytoplasmic 5 protein.
Length = 382
Score = 33.9 bits (74), Expect = 0.32
Identities = 14/20 (70%), Positives = 17/20 (85%)
Frame = +2
Query: 11 EMNGRIVGTKPLYVALAQRK 70
EMNGRIVG+KPL+V L Q +
Sbjct: 360 EMNGRIVGSKPLHVTLGQAR 379
>AL122118-1|CAB59276.1| 367|Homo sapiens hypothetical protein
protein.
Length = 367
Score = 33.9 bits (74), Expect = 0.32
Identities = 14/20 (70%), Positives = 17/20 (85%)
Frame = +2
Query: 11 EMNGRIVGTKPLYVALAQRK 70
EMNGRIVG+KPL+V L Q +
Sbjct: 345 EMNGRIVGSKPLHVTLGQAR 364
>AJ278963-1|CAC42826.1| 382|Homo sapiens Poly(A)-binding protein
cytoplasmic 5 protein.
Length = 382
Score = 33.9 bits (74), Expect = 0.32
Identities = 14/20 (70%), Positives = 17/20 (85%)
Frame = +2
Query: 11 EMNGRIVGTKPLYVALAQRK 70
EMNGRIVG+KPL+V L Q +
Sbjct: 360 EMNGRIVGSKPLHVTLGQAR 379
>BT007367-1|AAP36031.1| 868|Homo sapiens programmed cell death 6
interacting protein protein.
Length = 868
Score = 33.1 bits (72), Expect = 0.55
Identities = 19/50 (38%), Positives = 26/50 (52%)
Frame = +2
Query: 149 FQPSSAGGYFVPTIPPAQRFYGPAQMPQIRPTPRWTAQPPVRPSTQTPAS 298
+Q S AGG+ PT PP P MP +P P PPV P+ + P++
Sbjct: 727 YQSSPAGGH-APT-PPTP---APRTMPPTKPQPPARPPPPVLPANRAPSA 771
>BC068454-1|AAH68454.1| 873|Homo sapiens PDCD6IP protein protein.
Length = 873
Score = 33.1 bits (72), Expect = 0.55
Identities = 19/50 (38%), Positives = 26/50 (52%)
Frame = +2
Query: 149 FQPSSAGGYFVPTIPPAQRFYGPAQMPQIRPTPRWTAQPPVRPSTQTPAS 298
+Q S AGG+ PT PP P MP +P P PPV P+ + P++
Sbjct: 732 YQSSPAGGH-APT-PPTP---APRTMPPTKPQPPARPPPPVLPANRAPSA 776
>BC020066-1|AAH20066.1| 868|Homo sapiens programmed cell death 6
interacting protein protein.
Length = 868
Score = 33.1 bits (72), Expect = 0.55
Identities = 19/50 (38%), Positives = 26/50 (52%)
Frame = +2
Query: 149 FQPSSAGGYFVPTIPPAQRFYGPAQMPQIRPTPRWTAQPPVRPSTQTPAS 298
+Q S AGG+ PT PP P MP +P P PPV P+ + P++
Sbjct: 727 YQSSPAGGH-APT-PPTP---APRTMPPTKPQPPARPPPPVLPANRAPSA 771
>AK002122-1|BAA92092.1| 617|Homo sapiens protein ( Homo sapiens
cDNA FLJ11260 fis, clone PLACE1009060, weakly similar to
BRO1 PROTEIN. ).
Length = 617
Score = 33.1 bits (72), Expect = 0.55
Identities = 19/50 (38%), Positives = 26/50 (52%)
Frame = +2
Query: 149 FQPSSAGGYFVPTIPPAQRFYGPAQMPQIRPTPRWTAQPPVRPSTQTPAS 298
+Q S AGG+ PT PP P MP +P P PPV P+ + P++
Sbjct: 476 YQSSPAGGH-APT-PPTP---APRTMPPTKPQPPARPPPPVLPANRAPSA 520
>AF349951-1|AAK20398.1| 868|Homo sapiens HP95 protein.
Length = 868
Score = 33.1 bits (72), Expect = 0.55
Identities = 19/50 (38%), Positives = 26/50 (52%)
Frame = +2
Query: 149 FQPSSAGGYFVPTIPPAQRFYGPAQMPQIRPTPRWTAQPPVRPSTQTPAS 298
+Q S AGG+ PT PP P MP +P P PPV P+ + P++
Sbjct: 727 YQSSPAGGH-APT-PPTP---APRTMPPTKPQPPARPPPPVLPANRAPSA 771
>AB037796-1|BAA92613.1| 546|Homo sapiens KIAA1375 protein protein.
Length = 546
Score = 33.1 bits (72), Expect = 0.55
Identities = 19/50 (38%), Positives = 26/50 (52%)
Frame = +2
Query: 149 FQPSSAGGYFVPTIPPAQRFYGPAQMPQIRPTPRWTAQPPVRPSTQTPAS 298
+Q S AGG+ PT PP P MP +P P PPV P+ + P++
Sbjct: 405 YQSSPAGGH-APT-PPTP---APRTMPPTKPQPPARPPPPVLPANRAPSA 449
>BC082241-1|AAH82241.1| 1179|Homo sapiens USP19 protein protein.
Length = 1179
Score = 31.1 bits (67), Expect = 2.2
Identities = 15/40 (37%), Positives = 21/40 (52%)
Frame = +2
Query: 197 AQRFYGPAQMPQIRPTPRWTAQPPVRPSTQTPASAYANMQ 316
A + GP Q P++ PT TA P+ PA Y+NM+
Sbjct: 1139 ASQGLGPGQAPEVAPTR--TAPERFAPTVDRPAPTYSNME 1176
>AB209510-1|BAD92747.1| 964|Homo sapiens EBNA-2 co-activator
variant protein.
Length = 964
Score = 31.1 bits (67), Expect = 2.2
Identities = 17/45 (37%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Frame = +2
Query: 182 PTIPPAQRFYGPA-QMPQIRPTPRWTAQPPVRPSTQTPASAYANM 313
P+ PP+ PA ++ + PTP T PPVRP+ A A +M
Sbjct: 11 PSRPPSAAGSQPAPRLDSLSPTPTPTLTPPVRPAAPLVAFASPHM 55
>AF250394-1|AAQ14260.1| 868|Homo sapiens dopamine receptor
interacting protein 4 protein.
Length = 868
Score = 30.7 bits (66), Expect = 2.9
Identities = 18/50 (36%), Positives = 25/50 (50%)
Frame = +2
Query: 149 FQPSSAGGYFVPTIPPAQRFYGPAQMPQIRPTPRWTAQPPVRPSTQTPAS 298
+Q AGG+ PT PP P MP +P P PPV P+ + P++
Sbjct: 727 YQSLPAGGH-APT-PPTP---APRTMPPTKPQPPARPPPPVLPANRAPSA 771
>AF151793-1|AAF08220.1| 868|Homo sapiens ALG-2 interacting protein
1 protein.
Length = 868
Score = 30.7 bits (66), Expect = 2.9
Identities = 18/50 (36%), Positives = 25/50 (50%)
Frame = +2
Query: 149 FQPSSAGGYFVPTIPPAQRFYGPAQMPQIRPTPRWTAQPPVRPSTQTPAS 298
+Q AGG+ PT PP P MP +P P PPV P+ + P++
Sbjct: 727 YQSLPAGGH-APT-PPTP---APRTMPPTKPQPPARPPPPVLPANRAPSA 771
>DQ846849-1|ABI15201.1| 111|Homo sapiens dopamine D4 receptor
protein.
Length = 111
Score = 30.3 bits (65), Expect = 3.9
Identities = 22/58 (37%), Positives = 29/58 (50%), Gaps = 9/58 (15%)
Frame = +2
Query: 152 QPSSAGGYFVPTI-PPAQRFYGPAQMPQIRP----TPRWTAQPPVRP----STQTPAS 298
+P+S PT+ PP F G P +RP +PR A P VRP S +TPA+
Sbjct: 2 RPASPRTPAAPTVRPPRPAFPGVPAAPTVRPPRPASPRTPAAPTVRPPRPASPRTPAA 59
Score = 30.3 bits (65), Expect = 3.9
Identities = 22/58 (37%), Positives = 29/58 (50%), Gaps = 9/58 (15%)
Frame = +2
Query: 152 QPSSAGGYFVPTI-PPAQRFYGPAQMPQIRP----TPRWTAQPPVRP----STQTPAS 298
+P+S PT+ PP F G P +RP +PR A P VRP S +TPA+
Sbjct: 50 RPASPRTPAAPTVRPPRPAFPGVPAAPTVRPPRPASPRTPAAPTVRPPRPDSPRTPAA 107
>DQ314886-1|ABC40745.1| 828|Homo sapiens protein phosphatase 1,
regulatory (inhibitor) subunit 13 like protein.
Length = 828
Score = 30.3 bits (65), Expect = 3.9
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = +2
Query: 215 PAQMPQIRPTPRWTAQPPVRPSTQTPA 295
P PQ +P P+ QP +P T TPA
Sbjct: 412 PQPQPQSQPQPQLPPQPQTQPQTPTPA 438
>BC142727-1|AAI42728.1| 1449|Homo sapiens USP19 protein protein.
Length = 1449
Score = 30.3 bits (65), Expect = 3.9
Identities = 15/40 (37%), Positives = 20/40 (50%)
Frame = +2
Query: 197 AQRFYGPAQMPQIRPTPRWTAQPPVRPSTQTPASAYANMQ 316
A + GP Q P++ PT TA P PA Y+NM+
Sbjct: 1409 ASQGLGPGQAPEVAPTR--TAPERFAPPVDRPAPTYSNME 1446
>BC142660-1|AAI42661.1| 1447|Homo sapiens USP19 protein protein.
Length = 1447
Score = 30.3 bits (65), Expect = 3.9
Identities = 15/40 (37%), Positives = 20/40 (50%)
Frame = +2
Query: 197 AQRFYGPAQMPQIRPTPRWTAQPPVRPSTQTPASAYANMQ 316
A + GP Q P++ PT TA P PA Y+NM+
Sbjct: 1407 ASQGLGPGQAPEVAPTR--TAPERFAPPVDRPAPTYSNME 1444
>BC106029-1|AAI06030.1| 799|Homo sapiens USP19 protein protein.
Length = 799
Score = 30.3 bits (65), Expect = 3.9
Identities = 15/40 (37%), Positives = 20/40 (50%)
Frame = +2
Query: 197 AQRFYGPAQMPQIRPTPRWTAQPPVRPSTQTPASAYANMQ 316
A + GP Q P++ PT TA P PA Y+NM+
Sbjct: 759 ASQGLGPGQAPEVAPTR--TAPERFAPPVDRPAPTYSNME 796
>BC064913-1|AAH64913.1| 828|Homo sapiens protein phosphatase 1,
regulatory (inhibitor) subunit 13 like protein.
Length = 828
Score = 30.3 bits (65), Expect = 3.9
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = +2
Query: 215 PAQMPQIRPTPRWTAQPPVRPSTQTPA 295
P PQ +P P+ QP +P T TPA
Sbjct: 412 PQPQPQSQPQPQLPPQPQTQPQTPTPA 438
>BC048269-1|AAH48269.1| 436|Homo sapiens USP19 protein protein.
Length = 436
Score = 30.3 bits (65), Expect = 3.9
Identities = 15/40 (37%), Positives = 20/40 (50%)
Frame = +2
Query: 197 AQRFYGPAQMPQIRPTPRWTAQPPVRPSTQTPASAYANMQ 316
A + GP Q P++ PT TA P PA Y+NM+
Sbjct: 396 ASQGLGPGQAPEVAPTR--TAPERFAPPVDRPAPTYSNME 433
>BC032298-1|AAH32298.1| 828|Homo sapiens protein phosphatase 1,
regulatory (inhibitor) subunit 13 like protein.
Length = 828
Score = 30.3 bits (65), Expect = 3.9
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = +2
Query: 215 PAQMPQIRPTPRWTAQPPVRPSTQTPA 295
P PQ +P P+ QP +P T TPA
Sbjct: 412 PQPQPQSQPQPQLPPQPQTQPQTPTPA 438
>AY869712-1|AAW51146.1| 827|Homo sapiens NFkB interacting protein 1
protein.
Length = 827
Score = 30.3 bits (65), Expect = 3.9
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = +2
Query: 215 PAQMPQIRPTPRWTAQPPVRPSTQTPA 295
P PQ +P P+ QP +P T TPA
Sbjct: 411 PQPQPQSQPQPQLPPQPQTQPQTPTPA 437
>AK130326-1|BAC85327.1| 508|Homo sapiens protein ( Homo sapiens
cDNA FLJ26816 fis, clone PRS06437. ).
Length = 508
Score = 30.3 bits (65), Expect = 3.9
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = +2
Query: 215 PAQMPQIRPTPRWTAQPPVRPSTQTPA 295
P PQ +P P+ QP +P T TPA
Sbjct: 412 PQPQPQSQPQPQLPPQPQTQPQTPTPA 438
>AJ888472-1|CAI60219.1| 828|Homo sapiens inhibitor of apoptosis
stimulating protein of p53 protein.
Length = 828
Score = 30.3 bits (65), Expect = 3.9
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = +2
Query: 215 PAQMPQIRPTPRWTAQPPVRPSTQTPA 295
P PQ +P P+ QP +P T TPA
Sbjct: 412 PQPQPQSQPQPQLPPQPQTQPQTPTPA 438
>AJ606308-1|CAE54436.1| 4262|Homo sapiens secreted mucin MUC17
protein.
Length = 4262
Score = 30.3 bits (65), Expect = 3.9
Identities = 20/62 (32%), Positives = 28/62 (45%)
Frame = +1
Query: 199 TTLLWSSTNAANTTYTPMDCPTTCKTKHSNTCIGLRKYATTLPSSTKSSNTGCITYFSRS 378
+T L S+ A+ T+ TP D T T + T++P+ST S IT S S
Sbjct: 578 STRLVVSSEASTTSTTPADSNTFVTTSSEASSSSTTAEGTSMPTSTYSERGTTITSMSVS 637
Query: 379 KT 384
T
Sbjct: 638 TT 639
Score = 29.5 bits (63), Expect = 6.8
Identities = 25/104 (24%), Positives = 43/104 (41%), Gaps = 2/104 (1%)
Frame = +1
Query: 58 SSTQGRPQSPFDFTVHATHGKYAYAT-NGSDIPTK*-CRRILCSHHTSCTTLLWSSTNAA 231
S+T P F ++ + T G+ +PT R S +T L +S+ A+
Sbjct: 588 STTSTTPADSNTFVTTSSEASSSSTTAEGTSMPTSTYSERGTTITSMSVSTTLVASSEAS 647
Query: 232 NTTYTPMDCPTTCKTKHSNTCIGLRKYATTLPSSTKSSNTGCIT 363
+ TP+D T T T T++P+ST + + +T
Sbjct: 648 TLSTTPVDSNTPVTTSTEATSSSTTAEGTSMPTSTYTEGSTPLT 691
>AJ606307-1|CAE54435.1| 4493|Homo sapiens membrane mucin MUC17
protein.
Length = 4493
Score = 30.3 bits (65), Expect = 3.9
Identities = 20/62 (32%), Positives = 28/62 (45%)
Frame = +1
Query: 199 TTLLWSSTNAANTTYTPMDCPTTCKTKHSNTCIGLRKYATTLPSSTKSSNTGCITYFSRS 378
+T L S+ A+ T+ TP D T T + T++P+ST S IT S S
Sbjct: 578 STRLVVSSEASTTSTTPADSNTFVTTSSEASSSSTTAEGTSMPTSTYSERGTTITSMSVS 637
Query: 379 KT 384
T
Sbjct: 638 TT 639
Score = 29.5 bits (63), Expect = 6.8
Identities = 25/104 (24%), Positives = 43/104 (41%), Gaps = 2/104 (1%)
Frame = +1
Query: 58 SSTQGRPQSPFDFTVHATHGKYAYAT-NGSDIPTK*-CRRILCSHHTSCTTLLWSSTNAA 231
S+T P F ++ + T G+ +PT R S +T L +S+ A+
Sbjct: 588 STTSTTPADSNTFVTTSSEASSSSTTAEGTSMPTSTYSERGTTITSMSVSTTLVASSEAS 647
Query: 232 NTTYTPMDCPTTCKTKHSNTCIGLRKYATTLPSSTKSSNTGCIT 363
+ TP+D T T T T++P+ST + + +T
Sbjct: 648 TLSTTPVDSNTPVTTSTEATSSSTTAEGTSMPTSTYTEGSTPLT 691
>AB001025-1|BAA23795.1| 4866|Homo sapiens brain ryanodine receptor
protein.
Length = 4866
Score = 29.9 bits (64), Expect = 5.1
Identities = 16/76 (21%), Positives = 30/76 (39%), Gaps = 1/76 (1%)
Frame = +1
Query: 229 ANTTYTPMDCPTTCKTKHSNT-CIGLRKYATTLPSSTKSSNTGCITYFSRSKTNHRTTRC 405
A+ Y + P C + S++ C+ + S+T Y++ + C
Sbjct: 1284 ADMIYCRLSMPVECHSSFSHSPCLDSEAFQKRKQMQEILSHTTTQCYYAIRIFGGQDPSC 1343
Query: 406 CWHGWINPCTSCYSKQ 453
W GW+ P YS++
Sbjct: 1344 VWVGWVTPDYHLYSEK 1359
>Y08806-1|CAA70044.1| 353|Homo sapiens EWS protein.
Length = 353
Score = 29.5 bits (63), Expect = 6.8
Identities = 24/86 (27%), Positives = 33/86 (38%), Gaps = 3/86 (3%)
Frame = +2
Query: 152 QP-SSAGGYFVPTIPPAQRFYGPAQMPQIRPTPRWTAQPPVRPS--TQTPASAYANMQXX 322
QP SS GGY P++ Q Y Q+P P TA P P+ + T ++Y
Sbjct: 158 QPQSSTGGYNQPSLGYGQSNYSYPQVPGSYPMQPVTAPPSYPPTSYSSTQPTSYDQSSYS 217
Query: 323 XXXXXXXXXXXXXXTSLGARPITGQQ 400
+S G + GQQ
Sbjct: 218 QQNTYGQPSSYGQQSSYGQQSSYGQQ 243
>Y07848-1|CAA69177.1| 656|Homo sapiens RNA binding protein protein.
Length = 656
Score = 29.5 bits (63), Expect = 6.8
Identities = 24/86 (27%), Positives = 33/86 (38%), Gaps = 3/86 (3%)
Frame = +2
Query: 152 QP-SSAGGYFVPTIPPAQRFYGPAQMPQIRPTPRWTAQPPVRPS--TQTPASAYANMQXX 322
QP SS GGY P++ Q Y Q+P P TA P P+ + T ++Y
Sbjct: 150 QPQSSTGGYNQPSLGYGQSNYSYPQVPGSYPMQPVTAPPSYPPTSYSSTQPTSYDQSSYS 209
Query: 323 XXXXXXXXXXXXXXTSLGARPITGQQ 400
+S G + GQQ
Sbjct: 210 QQNTYGQPSSYGQQSSYGQQSSYGQQ 235
>X72990-1|CAA51489.1| 656|Homo sapiens EWS protein.
Length = 656
Score = 29.5 bits (63), Expect = 6.8
Identities = 24/86 (27%), Positives = 33/86 (38%), Gaps = 3/86 (3%)
Frame = +2
Query: 152 QP-SSAGGYFVPTIPPAQRFYGPAQMPQIRPTPRWTAQPPVRPS--TQTPASAYANMQXX 322
QP SS GGY P++ Q Y Q+P P TA P P+ + T ++Y
Sbjct: 150 QPQSSTGGYNQPSLGYGQSNYSYPQVPGSYPMQPVTAPPSYPPTSYSSTQPTSYDQSSYS 209
Query: 323 XXXXXXXXXXXXXXTSLGARPITGQQ 400
+S G + GQQ
Sbjct: 210 QQNTYGQPSSYGQQSSYGQQSSYGQQ 235
>X66899-1|CAA47350.1| 656|Homo sapiens RNA binding protein protein.
Length = 656
Score = 29.5 bits (63), Expect = 6.8
Identities = 24/86 (27%), Positives = 33/86 (38%), Gaps = 3/86 (3%)
Frame = +2
Query: 152 QP-SSAGGYFVPTIPPAQRFYGPAQMPQIRPTPRWTAQPPVRPS--TQTPASAYANMQXX 322
QP SS GGY P++ Q Y Q+P P TA P P+ + T ++Y
Sbjct: 150 QPQSSTGGYNQPSLGYGQSNYSYPQVPGSYPMQPVTAPPSYPPTSYSSTQPTSYDQSSYS 209
Query: 323 XXXXXXXXXXXXXXTSLGARPITGQQ 400
+S G + GQQ
Sbjct: 210 QQNTYGQPSSYGQQSSYGQQSSYGQQ 235
>U35622-1|AAB03569.2| 478|Homo sapiens EWS protein/E1A enhancer
binding protein chimera protein.
Length = 478
Score = 29.5 bits (63), Expect = 6.8
Identities = 24/86 (27%), Positives = 33/86 (38%), Gaps = 3/86 (3%)
Frame = +2
Query: 152 QP-SSAGGYFVPTIPPAQRFYGPAQMPQIRPTPRWTAQPPVRPS--TQTPASAYANMQXX 322
QP SS GGY P++ Q Y Q+P P TA P P+ + T ++Y
Sbjct: 150 QPQSSTGGYNQPSLGYGQSNYSYPQVPGSYPMQPVTAPPSYPPTSYSSTQPTSYDQSSYS 209
Query: 323 XXXXXXXXXXXXXXTSLGARPITGQQ 400
+S G + GQQ
Sbjct: 210 QQNTYGQPSSYGQQSSYGQQSSYGQQ 235
>CR542037-1|CAG46834.1| 225|Homo sapiens BCAS2 protein.
Length = 225
Score = 29.5 bits (63), Expect = 6.8
Identities = 19/64 (29%), Positives = 30/64 (46%)
Frame = +3
Query: 111 AWQVCVCNKWVRYSNQVVQEDTLFPPYLLHNAFMVQHKCRKYDLHPDGLPNHL*DQALKH 290
AWQ CV N + +Q V+ + L M QH C + ++ + L H+ + A K
Sbjct: 102 AWQECVNNSMAQLEHQAVRIENL--------ELMSQHGCNAWKVYNENLV-HMIEHAQKE 152
Query: 291 LHRL 302
L +L
Sbjct: 153 LQKL 156
>CR456490-1|CAG30376.1| 655|Homo sapiens EWSR1 protein.
Length = 655
Score = 29.5 bits (63), Expect = 6.8
Identities = 24/86 (27%), Positives = 33/86 (38%), Gaps = 3/86 (3%)
Frame = +2
Query: 152 QP-SSAGGYFVPTIPPAQRFYGPAQMPQIRPTPRWTAQPPVRPS--TQTPASAYANMQXX 322
QP SS GGY P++ Q Y Q+P P TA P P+ + T ++Y
Sbjct: 150 QPQSSTGGYNQPSLGYGQSNYSYPQVPGSYPMQPVTAPPSYPPTSYSSTQPTSYDQSSYS 209
Query: 323 XXXXXXXXXXXXXXTSLGARPITGQQ 400
+S G + GQQ
Sbjct: 210 QQNTYGQPSSYGQQSSYGQQSSYGQQ 235
>BT019390-1|AAV38197.1| 225|Homo sapiens breast carcinoma amplified
sequence 2 protein.
Length = 225
Score = 29.5 bits (63), Expect = 6.8
Identities = 19/64 (29%), Positives = 30/64 (46%)
Frame = +3
Query: 111 AWQVCVCNKWVRYSNQVVQEDTLFPPYLLHNAFMVQHKCRKYDLHPDGLPNHL*DQALKH 290
AWQ CV N + +Q V+ + L M QH C + ++ + L H+ + A K
Sbjct: 102 AWQECVNNSMAQLEHQAVRIENL--------ELMSQHGCNAWKVYNENLV-HMIEHAQKE 152
Query: 291 LHRL 302
L +L
Sbjct: 153 LQKL 156
>BC094683-1|AAH94683.1| 1305|Homo sapiens EIF4G3 protein protein.
Length = 1305
Score = 29.5 bits (63), Expect = 6.8
Identities = 15/31 (48%), Positives = 19/31 (61%), Gaps = 3/31 (9%)
Frame = +2
Query: 221 QMPQIRPTPRWT---AQPPVRPSTQTPASAY 304
Q PQI+P PR T + P +RP QTP + Y
Sbjct: 13 QRPQIQP-PRATIPNSSPSIRPGAQTPTAVY 42
>BC072442-1|AAH72442.1| 655|Homo sapiens Ewing sarcoma breakpoint
region 1 protein.
Length = 655
Score = 29.5 bits (63), Expect = 6.8
Identities = 24/86 (27%), Positives = 33/86 (38%), Gaps = 3/86 (3%)
Frame = +2
Query: 152 QP-SSAGGYFVPTIPPAQRFYGPAQMPQIRPTPRWTAQPPVRPS--TQTPASAYANMQXX 322
QP SS GGY P++ Q Y Q+P P TA P P+ + T ++Y
Sbjct: 150 QPQSSTGGYNQPSLGYGQSNYSYPQVPGSYPMQPVTAPPSYPPTSYSSTQPTSYDQSSYS 209
Query: 323 XXXXXXXXXXXXXXTSLGARPITGQQ 400
+S G + GQQ
Sbjct: 210 QQNTYGQPSSYGQQSSYGQQSSYGQQ 235
>BC054516-1|AAH54516.1| 666|Homo sapiens amyloid beta (A4)
precursor protein-binding, family B, member 1
interacting pro protein.
Length = 666
Score = 29.5 bits (63), Expect = 6.8
Identities = 19/47 (40%), Positives = 22/47 (46%), Gaps = 3/47 (6%)
Frame = +2
Query: 155 PSSAG--GYFVPTIPPAQRFYGPAQMPQ-IRPTPRWTAQPPVRPSTQ 286
PS AG G +P PP PA +P RP P +PPV P Q
Sbjct: 588 PSYAGIAGSELPPPPPPPPAPAPAPVPDSARPPPAVAKRPPVPPKRQ 634
>BC022880-1|AAH22880.1| 225|Homo sapiens breast carcinoma amplified
sequence 2 protein.
Length = 225
Score = 29.5 bits (63), Expect = 6.8
Identities = 19/64 (29%), Positives = 30/64 (46%)
Frame = +3
Query: 111 AWQVCVCNKWVRYSNQVVQEDTLFPPYLLHNAFMVQHKCRKYDLHPDGLPNHL*DQALKH 290
AWQ CV N + +Q V+ + L M QH C + ++ + L H+ + A K
Sbjct: 102 AWQECVNNSMAQLEHQAVRIENL--------ELMSQHGCNAWKVYNENLV-HMIEHAQKE 152
Query: 291 LHRL 302
L +L
Sbjct: 153 LQKL 156
>BC012623-1|AAH12623.1| 225|Homo sapiens breast carcinoma amplified
sequence 2 protein.
Length = 225
Score = 29.5 bits (63), Expect = 6.8
Identities = 19/64 (29%), Positives = 30/64 (46%)
Frame = +3
Query: 111 AWQVCVCNKWVRYSNQVVQEDTLFPPYLLHNAFMVQHKCRKYDLHPDGLPNHL*DQALKH 290
AWQ CV N + +Q V+ + L M QH C + ++ + L H+ + A K
Sbjct: 102 AWQECVNNSMAQLEHQAVRIENL--------ELMSQHGCNAWKVYNENLV-HMIEHAQKE 152
Query: 291 LHRL 302
L +L
Sbjct: 153 LQKL 156
>BC011048-1|AAH11048.1| 655|Homo sapiens Ewing sarcoma breakpoint
region 1 protein.
Length = 655
Score = 29.5 bits (63), Expect = 6.8
Identities = 24/86 (27%), Positives = 33/86 (38%), Gaps = 3/86 (3%)
Frame = +2
Query: 152 QP-SSAGGYFVPTIPPAQRFYGPAQMPQIRPTPRWTAQPPVRPS--TQTPASAYANMQXX 322
QP SS GGY P++ Q Y Q+P P TA P P+ + T ++Y
Sbjct: 150 QPQSSTGGYNQPSLGYGQSNYSYPQVPGSYPMQPVTAPPSYPPTSYSSTQPTSYDQSSYS 209
Query: 323 XXXXXXXXXXXXXXTSLGARPITGQQ 400
+S G + GQQ
Sbjct: 210 QQNTYGQPSSYGQQSSYGQQSSYGQQ 235
>BC005285-1|AAH05285.1| 225|Homo sapiens breast carcinoma amplified
sequence 2 protein.
Length = 225
Score = 29.5 bits (63), Expect = 6.8
Identities = 19/64 (29%), Positives = 30/64 (46%)
Frame = +3
Query: 111 AWQVCVCNKWVRYSNQVVQEDTLFPPYLLHNAFMVQHKCRKYDLHPDGLPNHL*DQALKH 290
AWQ CV N + +Q V+ + L M QH C + ++ + L H+ + A K
Sbjct: 102 AWQECVNNSMAQLEHQAVRIENL--------ELMSQHGCNAWKVYNENLV-HMIEHAQKE 152
Query: 291 LHRL 302
L +L
Sbjct: 153 LQKL 156
>BC004817-1|AAH04817.1| 656|Homo sapiens Ewing sarcoma breakpoint
region 1 protein.
Length = 656
Score = 29.5 bits (63), Expect = 6.8
Identities = 24/86 (27%), Positives = 33/86 (38%), Gaps = 3/86 (3%)
Frame = +2
Query: 152 QP-SSAGGYFVPTIPPAQRFYGPAQMPQIRPTPRWTAQPPVRPS--TQTPASAYANMQXX 322
QP SS GGY P++ Q Y Q+P P TA P P+ + T ++Y
Sbjct: 150 QPQSSTGGYNQPSLGYGQSNYSYPQVPGSYPMQPVTAPPSYPPTSYSSTQPTSYDQSSYS 209
Query: 323 XXXXXXXXXXXXXXTSLGARPITGQQ 400
+S G + GQQ
Sbjct: 210 QQNTYGQPSSYGQQSSYGQQSSYGQQ 235
>BC000527-1|AAH00527.1| 354|Homo sapiens EWSR1 protein protein.
Length = 354
Score = 29.5 bits (63), Expect = 6.8
Identities = 24/86 (27%), Positives = 33/86 (38%), Gaps = 3/86 (3%)
Frame = +2
Query: 152 QP-SSAGGYFVPTIPPAQRFYGPAQMPQIRPTPRWTAQPPVRPS--TQTPASAYANMQXX 322
QP SS GGY P++ Q Y Q+P P TA P P+ + T ++Y
Sbjct: 150 QPQSSTGGYNQPSLGYGQSNYSYPQVPGSYPMQPVTAPPSYPPTSYSSTQPTSYDQSSYS 209
Query: 323 XXXXXXXXXXXXXXTSLGARPITGQQ 400
+S G + GQQ
Sbjct: 210 QQNTYGQPSSYGQQSSYGQQSSYGQQ 235
>AL627311-4|CAI14555.1| 220|Homo sapiens eukaryotic translation
initiation factor 4 gamma,8, apolipoprotein e receptor
protein.
Length = 220
Score = 29.5 bits (63), Expect = 6.8
Identities = 15/31 (48%), Positives = 19/31 (61%), Gaps = 3/31 (9%)
Frame = +2
Query: 221 QMPQIRPTPRWT---AQPPVRPSTQTPASAY 304
Q PQI+P PR T + P +RP QTP + Y
Sbjct: 51 QRPQIQP-PRATIPNSSPSIRPGAQTPTAVY 80
>AL627311-3|CAI14554.1| 217|Homo sapiens eukaryotic translation
initiation factor 4 gamma,sporter, y+ system), member 3
protein.
Length = 217
Score = 29.5 bits (63), Expect = 6.8
Identities = 15/31 (48%), Positives = 19/31 (61%), Gaps = 3/31 (9%)
Frame = +2
Query: 221 QMPQIRPTPRWT---AQPPVRPSTQTPASAY 304
Q PQI+P PR T + P +RP QTP + Y
Sbjct: 13 QRPQIQP-PRATIPNSSPSIRPGAQTPTAVY 42
>AL627311-2|CAI14553.1| 1585|Homo sapiens eukaryotic translation
initiation factor 4 gamma,actor receptor 3 (achondroplas
protein.
Length = 1585
Score = 29.5 bits (63), Expect = 6.8
Identities = 15/31 (48%), Positives = 19/31 (61%), Gaps = 3/31 (9%)
Frame = +2
Query: 221 QMPQIRPTPRWT---AQPPVRPSTQTPASAY 304
Q PQI+P PR T + P +RP QTP + Y
Sbjct: 13 QRPQIQP-PRATIPNSSPSIRPGAQTPTAVY 42
>AL606477-7|CAI12534.1| 1585|Homo sapiens eukaryotic translation
initiation factor 4 gamma,(S. cerevisiae) protein.
Length = 1585
Score = 29.5 bits (63), Expect = 6.8
Identities = 15/31 (48%), Positives = 19/31 (61%), Gaps = 3/31 (9%)
Frame = +2
Query: 221 QMPQIRPTPRWT---AQPPVRPSTQTPASAY 304
Q PQI+P PR T + P +RP QTP + Y
Sbjct: 13 QRPQIQP-PRATIPNSSPSIRPGAQTPTAVY 42
>AL390241-7|CAI13553.1| 225|Homo sapiens breast carcinoma amplified
sequence 2 protein.
Length = 225
Score = 29.5 bits (63), Expect = 6.8
Identities = 19/64 (29%), Positives = 30/64 (46%)
Frame = +3
Query: 111 AWQVCVCNKWVRYSNQVVQEDTLFPPYLLHNAFMVQHKCRKYDLHPDGLPNHL*DQALKH 290
AWQ CV N + +Q V+ + L M QH C + ++ + L H+ + A K
Sbjct: 102 AWQECVNNSMAQLEHQAVRIENL--------ELMSQHGCNAWKVYNENLV-HMIEHAQKE 152
Query: 291 LHRL 302
L +L
Sbjct: 153 LQKL 156
>AL358392-4|CAI12157.1| 220|Homo sapiens eukaryotic translation
initiation factor 4 gamma,ene protein.
Length = 220
Score = 29.5 bits (63), Expect = 6.8
Identities = 15/31 (48%), Positives = 19/31 (61%), Gaps = 3/31 (9%)
Frame = +2
Query: 221 QMPQIRPTPRWT---AQPPVRPSTQTPASAY 304
Q PQI+P PR T + P +RP QTP + Y
Sbjct: 51 QRPQIQP-PRATIPNSSPSIRPGAQTPTAVY 80
>AL358392-3|CAI12156.1| 217|Homo sapiens eukaryotic translation
initiation factor 4 gamma,ubfamily, member 10 protein.
Length = 217
Score = 29.5 bits (63), Expect = 6.8
Identities = 15/31 (48%), Positives = 19/31 (61%), Gaps = 3/31 (9%)
Frame = +2
Query: 221 QMPQIRPTPRWT---AQPPVRPSTQTPASAY 304
Q PQI+P PR T + P +RP QTP + Y
Sbjct: 13 QRPQIQP-PRATIPNSSPSIRPGAQTPTAVY 42
>AL358392-2|CAI12155.1| 1585|Homo sapiens eukaryotic translation
initiation factor 4 gamma,fluid) protein.
Length = 1585
Score = 29.5 bits (63), Expect = 6.8
Identities = 15/31 (48%), Positives = 19/31 (61%), Gaps = 3/31 (9%)
Frame = +2
Query: 221 QMPQIRPTPRWT---AQPPVRPSTQTPASAY 304
Q PQI+P PR T + P +RP QTP + Y
Sbjct: 13 QRPQIQP-PRATIPNSSPSIRPGAQTPTAVY 42
>AL160287-2|CAH70339.1| 666|Homo sapiens amyloid beta (A4)
precursor protein-binding, family B, member 1
interacting pro protein.
Length = 666
Score = 29.5 bits (63), Expect = 6.8
Identities = 19/47 (40%), Positives = 22/47 (46%), Gaps = 3/47 (6%)
Frame = +2
Query: 155 PSSAG--GYFVPTIPPAQRFYGPAQMPQ-IRPTPRWTAQPPVRPSTQ 286
PS AG G +P PP PA +P RP P +PPV P Q
Sbjct: 588 PSYAGIAGSELPPPPPPPPAPAPAPVPDSARPPPAVAKRPPVPPKRQ 634
>AL031186-2|CAI18001.1| 656|Homo sapiens Ewing sarcoma breakpoint
region 1 protein.
Length = 656
Score = 29.5 bits (63), Expect = 6.8
Identities = 24/86 (27%), Positives = 33/86 (38%), Gaps = 3/86 (3%)
Frame = +2
Query: 152 QP-SSAGGYFVPTIPPAQRFYGPAQMPQIRPTPRWTAQPPVRPS--TQTPASAYANMQXX 322
QP SS GGY P++ Q Y Q+P P TA P P+ + T ++Y
Sbjct: 150 QPQSSTGGYNQPSLGYGQSNYSYPQVPGSYPMQPVTAPPSYPPTSYSSTQPTSYDQSSYS 209
Query: 323 XXXXXXXXXXXXXXTSLGARPITGQQ 400
+S G + GQQ
Sbjct: 210 QQNTYGQPSSYGQQSSYGQQSSYGQQ 235
>AK222637-1|BAD96357.1| 225|Homo sapiens breast carcinoma amplified
sequence 2 variant protein.
Length = 225
Score = 29.5 bits (63), Expect = 6.8
Identities = 19/64 (29%), Positives = 30/64 (46%)
Frame = +3
Query: 111 AWQVCVCNKWVRYSNQVVQEDTLFPPYLLHNAFMVQHKCRKYDLHPDGLPNHL*DQALKH 290
AWQ CV N + +Q V+ + L M QH C + ++ + L H+ + A K
Sbjct: 102 AWQECVNNSMAQLEHQAVRIENL--------ELMSQHGCNAWKVYNENLV-HMIEHAQKE 152
Query: 291 LHRL 302
L +L
Sbjct: 153 LQKL 156
>AK056309-1|BAB71145.1| 661|Homo sapiens protein ( Homo sapiens
cDNA FLJ31747 fis, clone NT2RI2007377, highly similar to
RNA-BINDING PROTEIN EWS. ).
Length = 661
Score = 29.5 bits (63), Expect = 6.8
Identities = 24/86 (27%), Positives = 33/86 (38%), Gaps = 3/86 (3%)
Frame = +2
Query: 152 QP-SSAGGYFVPTIPPAQRFYGPAQMPQIRPTPRWTAQPPVRPS--TQTPASAYANMQXX 322
QP SS GGY P++ Q Y Q+P P TA P P+ + T ++Y
Sbjct: 156 QPQSSTGGYNQPSLGYGQSNYSYPQVPGSYPMQPVTAPPSYPPTSYSSTQPTSYDQSSYS 215
Query: 323 XXXXXXXXXXXXXXTSLGARPITGQQ 400
+S G + GQQ
Sbjct: 216 QQNTYGQPSSYGQQSSYGQQSSYGQQ 241
>AF327066-1|AAK11227.1| 476|Homo sapiens Ewings sarcoma EWS-Fli1
(type 1) oncogene protein.
Length = 476
Score = 29.5 bits (63), Expect = 6.8
Identities = 24/86 (27%), Positives = 33/86 (38%), Gaps = 3/86 (3%)
Frame = +2
Query: 152 QP-SSAGGYFVPTIPPAQRFYGPAQMPQIRPTPRWTAQPPVRPS--TQTPASAYANMQXX 322
QP SS GGY P++ Q Y Q+P P TA P P+ + T ++Y
Sbjct: 150 QPQSSTGGYNQPSLGYGQSNYSYPQVPGSYPMQPVTAPPSYPPTSYSSTQPTSYDQSSYS 209
Query: 323 XXXXXXXXXXXXXXTSLGARPITGQQ 400
+S G + GQQ
Sbjct: 210 QQNTYGQPSSYGQQSSYGQQSSYGQQ 235
>AF254088-1|AAG09037.1| 609|Homo sapiens EWS/ZSG fusion protein
long B isoform protein.
Length = 609
Score = 29.5 bits (63), Expect = 6.8
Identities = 24/86 (27%), Positives = 33/86 (38%), Gaps = 3/86 (3%)
Frame = +2
Query: 152 QP-SSAGGYFVPTIPPAQRFYGPAQMPQIRPTPRWTAQPPVRPS--TQTPASAYANMQXX 322
QP SS GGY P++ Q Y Q+P P TA P P+ + T ++Y
Sbjct: 150 QPQSSTGGYNQPSLGYGQSNYSYPQVPGSYPMQPVTAPPSYPPTSYSSTQPTSYDQSSYS 209
Query: 323 XXXXXXXXXXXXXXTSLGARPITGQQ 400
+S G + GQQ
Sbjct: 210 QQNTYGQPSSYGQQSSYGQQSSYGQQ 235
>AF254087-1|AAG09036.1| 713|Homo sapiens EWS/ZSG fusion protein
long A isoform protein.
Length = 713
Score = 29.5 bits (63), Expect = 6.8
Identities = 24/86 (27%), Positives = 33/86 (38%), Gaps = 3/86 (3%)
Frame = +2
Query: 152 QP-SSAGGYFVPTIPPAQRFYGPAQMPQIRPTPRWTAQPPVRPS--TQTPASAYANMQXX 322
QP SS GGY P++ Q Y Q+P P TA P P+ + T ++Y
Sbjct: 150 QPQSSTGGYNQPSLGYGQSNYSYPQVPGSYPMQPVTAPPSYPPTSYSSTQPTSYDQSSYS 209
Query: 323 XXXXXXXXXXXXXXTSLGARPITGQQ 400
+S G + GQQ
Sbjct: 210 QQNTYGQPSSYGQQSSYGQQSSYGQQ 235
>AF254086-1|AAG09035.1| 609|Homo sapiens EWS/ZSG fusion protein
short isoform protein.
Length = 609
Score = 29.5 bits (63), Expect = 6.8
Identities = 24/86 (27%), Positives = 33/86 (38%), Gaps = 3/86 (3%)
Frame = +2
Query: 152 QP-SSAGGYFVPTIPPAQRFYGPAQMPQIRPTPRWTAQPPVRPS--TQTPASAYANMQXX 322
QP SS GGY P++ Q Y Q+P P TA P P+ + T ++Y
Sbjct: 150 QPQSSTGGYNQPSLGYGQSNYSYPQVPGSYPMQPVTAPPSYPPTSYSSTQPTSYDQSSYS 209
Query: 323 XXXXXXXXXXXXXXTSLGARPITGQQ 400
+S G + GQQ
Sbjct: 210 QQNTYGQPSSYGQQSSYGQQSSYGQQ 235
>AF081788-1|AAC64059.1| 225|Homo sapiens putative spliceosome
associated protein protein.
Length = 225
Score = 29.5 bits (63), Expect = 6.8
Identities = 19/64 (29%), Positives = 30/64 (46%)
Frame = +3
Query: 111 AWQVCVCNKWVRYSNQVVQEDTLFPPYLLHNAFMVQHKCRKYDLHPDGLPNHL*DQALKH 290
AWQ CV N + +Q V+ + L M QH C + ++ + L H+ + A K
Sbjct: 102 AWQECVNNSMAQLEHQAVRIENL--------ELMSQHGCNAWKVYNENLV-HMIEHAQKE 152
Query: 291 LHRL 302
L +L
Sbjct: 153 LQKL 156
>AF012072-1|AAC02903.2| 1585|Homo sapiens eIF4GII protein.
Length = 1585
Score = 29.5 bits (63), Expect = 6.8
Identities = 15/31 (48%), Positives = 19/31 (61%), Gaps = 3/31 (9%)
Frame = +2
Query: 221 QMPQIRPTPRWT---AQPPVRPSTQTPASAY 304
Q PQI+P PR T + P +RP QTP + Y
Sbjct: 13 QRPQIQP-PRATIPNSSPSIRPGAQTPTAVY 42
>AB209119-1|BAD92356.1| 1780|Homo sapiens eukaryotic translation
initiation factor 4 gamma, 3 variant protein.
Length = 1780
Score = 29.5 bits (63), Expect = 6.8
Identities = 15/31 (48%), Positives = 19/31 (61%), Gaps = 3/31 (9%)
Frame = +2
Query: 221 QMPQIRPTPRWT---AQPPVRPSTQTPASAY 304
Q PQI+P PR T + P +RP QTP + Y
Sbjct: 209 QRPQIQP-PRATIPNSSPSIRPGAQTPTAVY 238
>AB085852-1|BAC41256.1| 666|Homo sapiens proline-rich protein 73
protein.
Length = 666
Score = 29.5 bits (63), Expect = 6.8
Identities = 19/47 (40%), Positives = 22/47 (46%), Gaps = 3/47 (6%)
Frame = +2
Query: 155 PSSAG--GYFVPTIPPAQRFYGPAQMPQ-IRPTPRWTAQPPVRPSTQ 286
PS AG G +P PP PA +P RP P +PPV P Q
Sbjct: 588 PSYAGIAGSELPPPPPPPPAPAPAPVPDSARPPPAVAKRPPVPPKRQ 634
>AB020623-1|BAA34863.1| 225|Homo sapiens DAM1 protein.
Length = 225
Score = 29.5 bits (63), Expect = 6.8
Identities = 19/64 (29%), Positives = 30/64 (46%)
Frame = +3
Query: 111 AWQVCVCNKWVRYSNQVVQEDTLFPPYLLHNAFMVQHKCRKYDLHPDGLPNHL*DQALKH 290
AWQ CV N + +Q V+ + L M QH C + ++ + L H+ + A K
Sbjct: 102 AWQECVNNSMAQLEHQAVRIENL--------ELMSQHGCNAWKVYNENLV-HMIEHAQKE 152
Query: 291 LHRL 302
L +L
Sbjct: 153 LQKL 156
>Z48500-1|CAA88400.1| 273|Homo sapiens human mammary
dihydrolipoamide acetyltransferase,r protein.
Length = 273
Score = 29.1 bits (62), Expect = 9.0
Identities = 13/22 (59%), Positives = 14/22 (63%)
Frame = +2
Query: 239 PTPRWTAQPPVRPSTQTPASAY 304
PTP TA PP PS Q P S+Y
Sbjct: 140 PTPAATASPPT-PSAQAPGSSY 160
>Y00978-1|CAA68787.1| 615|Homo sapiens PDC-E2 precursor (AA -54 to
561) protein.
Length = 615
Score = 29.1 bits (62), Expect = 9.0
Identities = 13/22 (59%), Positives = 14/22 (63%)
Frame = +2
Query: 239 PTPRWTAQPPVRPSTQTPASAY 304
PTP TA PP PS Q P S+Y
Sbjct: 163 PTPAATASPPT-PSAQAPGSSY 183
>L76191-1|AAC41949.1| 712|Homo sapiens interleukin-1
receptor-associated kinase protein.
Length = 712
Score = 29.1 bits (62), Expect = 9.0
Identities = 15/46 (32%), Positives = 18/46 (39%)
Frame = +2
Query: 155 PSSAGGYFVPTIPPAQRFYGPAQMPQIRPTPRWTAQPPVRPSTQTP 292
PSSA + P P +Q GP P W P PS+ P
Sbjct: 136 PSSASTFLSPAFPGSQTHSGPELGLVPSPASLWPPPPSPAPSSTKP 181
>J03866-1|AAA62253.1| 613|Homo sapiens dihydrolipoamide
acetyltransferase protein.
Length = 613
Score = 29.1 bits (62), Expect = 9.0
Identities = 13/22 (59%), Positives = 14/22 (63%)
Frame = +2
Query: 239 PTPRWTAQPPVRPSTQTPASAY 304
PTP TA PP PS Q P S+Y
Sbjct: 162 PTPAATASPPT-PSAQAPGSSY 182
>DQ054788-1|AAY88246.1| 633|Homo sapiens interleukin-1 receptor
associated-kinase 1 splice variant c protein.
Length = 633
Score = 29.1 bits (62), Expect = 9.0
Identities = 15/46 (32%), Positives = 18/46 (39%)
Frame = +2
Query: 155 PSSAGGYFVPTIPPAQRFYGPAQMPQIRPTPRWTAQPPVRPSTQTP 292
PSSA + P P +Q GP P W P PS+ P
Sbjct: 136 PSSASTFLSPAFPGSQTHSGPELGLVPSPASLWPPPPSPAPSSTKP 181
>BC054000-1|AAH54000.1| 693|Homo sapiens IRAK1 protein protein.
Length = 693
Score = 29.1 bits (62), Expect = 9.0
Identities = 15/46 (32%), Positives = 18/46 (39%)
Frame = +2
Query: 155 PSSAGGYFVPTIPPAQRFYGPAQMPQIRPTPRWTAQPPVRPSTQTP 292
PSSA + P P +Q GP P W P PS+ P
Sbjct: 162 PSSASTFLSPAFPGSQTHSGPELGLVPSPASLWPPPPSPAPSSTKP 207
>BC039084-1|AAH39084.1| 647|Homo sapiens dihydrolipoamide
S-acetyltransferase (E2 component of pyruvate
dehydrogenase co protein.
Length = 647
Score = 29.1 bits (62), Expect = 9.0
Identities = 13/22 (59%), Positives = 14/22 (63%)
Frame = +2
Query: 239 PTPRWTAQPPVRPSTQTPASAY 304
PTP TA PP PS Q P S+Y
Sbjct: 195 PTPAATASPPT-PSAQAPGSSY 215
>BC014963-1|AAH14963.1| 633|Homo sapiens interleukin-1
receptor-associated kinase 1 protein.
Length = 633
Score = 29.1 bits (62), Expect = 9.0
Identities = 15/46 (32%), Positives = 18/46 (39%)
Frame = +2
Query: 155 PSSAGGYFVPTIPPAQRFYGPAQMPQIRPTPRWTAQPPVRPSTQTP 292
PSSA + P P +Q GP P W P PS+ P
Sbjct: 136 PSSASTFLSPAFPGSQTHSGPELGLVPSPASLWPPPPSPAPSSTKP 181
>AK223596-1|BAD97316.1| 647|Homo sapiens dihydrolipoamide
S-acetyltransferase (E2 component of pyruvate
dehydrogenase co protein.
Length = 647
Score = 29.1 bits (62), Expect = 9.0
Identities = 13/22 (59%), Positives = 14/22 (63%)
Frame = +2
Query: 239 PTPRWTAQPPVRPSTQTPASAY 304
PTP TA PP PS Q P S+Y
Sbjct: 195 PTPAATASPPT-PSAQAPGSSY 215
>AK126225-1|BAC86496.1| 139|Homo sapiens protein ( Homo sapiens
cDNA FLJ44237 fis, clone THYMU3007845. ).
Length = 139
Score = 29.1 bits (62), Expect = 9.0
Identities = 14/37 (37%), Positives = 19/37 (51%)
Frame = -3
Query: 307 CVSRCRCLSAWSYRWLGSPSGCRSYLRHLCWTIKALC 197
C + C CL+ ++WL SP LC T +ALC
Sbjct: 104 CCAWCGCLNCEPFKWLPSPRRWPGACLKLCCT-QALC 139
>AJ001515-1|CAA04798.1| 4870|Homo sapiens ryanodine receptor 3
protein.
Length = 4870
Score = 29.1 bits (62), Expect = 9.0
Identities = 16/76 (21%), Positives = 30/76 (39%), Gaps = 1/76 (1%)
Frame = +1
Query: 229 ANTTYTPMDCPTTCKTKHSNT-CIGLRKYATTLPSSTKSSNTGCITYFSRSKTNHRTTRC 405
A+ Y + P C + S++ C+ + S+T Y++ + C
Sbjct: 1283 ADMIYCRLSMPVECHSSFSHSPCLDSEAFQKRKQMQEILSHTTTQCYYAIRIFAGQDPSC 1342
Query: 406 CWHGWINPCTSCYSKQ 453
W GW+ P YS++
Sbjct: 1343 VWVGWVTPDYHLYSEK 1358
>AF346607-1|AAK62888.1| 682|Homo sapiens interleukin-1 receptor
associated kinase 1b protein.
Length = 682
Score = 29.1 bits (62), Expect = 9.0
Identities = 15/46 (32%), Positives = 18/46 (39%)
Frame = +2
Query: 155 PSSAGGYFVPTIPPAQRFYGPAQMPQIRPTPRWTAQPPVRPSTQTP 292
PSSA + P P +Q GP P W P PS+ P
Sbjct: 136 PSSASTFLSPAFPGSQTHSGPELGLVPSPASLWPPPPSPAPSSTKP 181
>AF030876-1|AAC08756.1| 712|Homo sapiens Interleukin 1
receptor-associated kinase 1 protein.
Length = 712
Score = 29.1 bits (62), Expect = 9.0
Identities = 15/46 (32%), Positives = 18/46 (39%)
Frame = +2
Query: 155 PSSAGGYFVPTIPPAQRFYGPAQMPQIRPTPRWTAQPPVRPSTQTP 292
PSSA + P P +Q GP P W P PS+ P
Sbjct: 136 PSSASTFLSPAFPGSQTHSGPELGLVPSPASLWPPPPSPAPSSTKP 181
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 80,708,615
Number of Sequences: 237096
Number of extensions: 1823825
Number of successful extensions: 7417
Number of sequences better than 10.0: 125
Number of HSP's better than 10.0 without gapping: 6339
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7306
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4536472160
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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