Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0013_K10
(498 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
U70841-1|AAC47455.1| 377|Apis mellifera ultraviolet sensitive o... 23 1.8
AF004169-1|AAC13418.1| 371|Apis mellifera ultraviolet-sensitive... 23 1.8
AF004168-1|AAC13417.1| 377|Apis mellifera blue-sensitive opsin ... 23 1.8
AY336529-1|AAQ02340.1| 712|Apis mellifera transferrin protein. 21 5.4
AY336528-1|AAQ02339.1| 712|Apis mellifera transferrin protein. 21 5.4
AY217097-1|AAO39761.1| 712|Apis mellifera transferrin protein. 21 5.4
AF134821-1|AAD40236.1| 226|Apis mellifera hexamerin protein. 21 5.4
DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chlor... 21 7.1
EF013389-1|ABK54743.1| 172|Apis mellifera elongation factor 1-a... 21 9.4
AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor 1-a... 21 9.4
AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1al... 21 9.4
AB264335-1|BAF44090.1| 87|Apis mellifera ecdysone-induced prot... 21 9.4
AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced prot... 21 9.4
AB204559-1|BAD89804.1| 832|Apis mellifera soluble guanylyl cycl... 21 9.4
>U70841-1|AAC47455.1| 377|Apis mellifera ultraviolet sensitive
opsin protein.
Length = 377
Score = 23.0 bits (47), Expect = 1.8
Identities = 13/51 (25%), Positives = 27/51 (52%)
Frame = +3
Query: 300 LTQICNHPTVLHQELQHRLHYVLL*EQDQSQDNKVLLARLDQSVHLLLLKA 452
L+ I NH +L ++ + L+ QD+ + +V +A++ ++ L L A
Sbjct: 244 LSSIRNHEKMLREQAKKMNVKSLVSNQDKERSAEVRIAKVAFTIFFLFLLA 294
>AF004169-1|AAC13418.1| 371|Apis mellifera ultraviolet-sensitive
opsin protein.
Length = 371
Score = 23.0 bits (47), Expect = 1.8
Identities = 7/9 (77%), Positives = 8/9 (88%)
Frame = -1
Query: 171 PPALLGWNI 145
PP LLGWN+
Sbjct: 17 PPRLLGWNV 25
>AF004168-1|AAC13417.1| 377|Apis mellifera blue-sensitive opsin
protein.
Length = 377
Score = 23.0 bits (47), Expect = 1.8
Identities = 13/51 (25%), Positives = 27/51 (52%)
Frame = +3
Query: 300 LTQICNHPTVLHQELQHRLHYVLL*EQDQSQDNKVLLARLDQSVHLLLLKA 452
L+ I NH +L ++ + L+ QD+ + +V +A++ ++ L L A
Sbjct: 244 LSSIRNHEKMLREQAKKMNVKSLVSNQDKERSAEVRIAKVAFTIFFLFLLA 294
>AY336529-1|AAQ02340.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 21.4 bits (43), Expect = 5.4
Identities = 14/39 (35%), Positives = 18/39 (46%)
Frame = -1
Query: 282 VLGLTGGWAVHRGVGRICGICAGP*KRCAGGMVGTKYPP 166
V GL G + H GVGR G K A G++ + P
Sbjct: 138 VQGLRGLKSCHTGVGRNVGYKIPITKLTAMGVLNNLHDP 176
>AY336528-1|AAQ02339.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 21.4 bits (43), Expect = 5.4
Identities = 14/39 (35%), Positives = 18/39 (46%)
Frame = -1
Query: 282 VLGLTGGWAVHRGVGRICGICAGP*KRCAGGMVGTKYPP 166
V GL G + H GVGR G K A G++ + P
Sbjct: 138 VQGLRGLKSCHTGVGRNVGYKIPITKLTAMGVLNNLHDP 176
>AY217097-1|AAO39761.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 21.4 bits (43), Expect = 5.4
Identities = 14/39 (35%), Positives = 18/39 (46%)
Frame = -1
Query: 282 VLGLTGGWAVHRGVGRICGICAGP*KRCAGGMVGTKYPP 166
V GL G + H GVGR G K A G++ + P
Sbjct: 138 VQGLRGLKSCHTGVGRNVGYKIPITKLTAMGVLNNLHDP 176
>AF134821-1|AAD40236.1| 226|Apis mellifera hexamerin protein.
Length = 226
Score = 21.4 bits (43), Expect = 5.4
Identities = 8/16 (50%), Positives = 8/16 (50%)
Frame = +1
Query: 190 TSCTTLLWSSTNAANT 237
T CTT WS A T
Sbjct: 199 TCCTTXWWSXXTVAXT 214
>DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chloride
channel protein.
Length = 428
Score = 21.0 bits (42), Expect = 7.1
Identities = 10/20 (50%), Positives = 11/20 (55%)
Frame = +2
Query: 242 TPRWTAQPPVRPSTQTPASA 301
TP A PP PS+ P SA
Sbjct: 337 TPPKPAPPPPPPSSSGPDSA 356
>EF013389-1|ABK54743.1| 172|Apis mellifera elongation factor
1-alpha protein.
Length = 172
Score = 20.6 bits (41), Expect = 9.4
Identities = 7/15 (46%), Positives = 9/15 (60%)
Frame = -1
Query: 264 GWAVHRGVGRICGIC 220
GW V R G++ G C
Sbjct: 140 GWTVERKEGKVEGKC 154
>AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor
1-alpha protein.
Length = 274
Score = 20.6 bits (41), Expect = 9.4
Identities = 7/15 (46%), Positives = 9/15 (60%)
Frame = -1
Query: 264 GWAVHRGVGRICGIC 220
GW V R G++ G C
Sbjct: 156 GWTVERKEGKVEGKC 170
>AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1alpha
F2 protein.
Length = 461
Score = 20.6 bits (41), Expect = 9.4
Identities = 7/15 (46%), Positives = 9/15 (60%)
Frame = -1
Query: 264 GWAVHRGVGRICGIC 220
GW V R G++ G C
Sbjct: 213 GWTVERKEGKVEGKC 227
>AB264335-1|BAF44090.1| 87|Apis mellifera ecdysone-induced protein
75 protein.
Length = 87
Score = 20.6 bits (41), Expect = 9.4
Identities = 7/14 (50%), Positives = 9/14 (64%)
Frame = -1
Query: 129 IRILAMRCMYCEVK 88
+RI RC YC +K
Sbjct: 64 LRINRNRCQYCRLK 77
>AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced protein
75 protein.
Length = 900
Score = 20.6 bits (41), Expect = 9.4
Identities = 7/14 (50%), Positives = 9/14 (64%)
Frame = -1
Query: 129 IRILAMRCMYCEVK 88
+RI RC YC +K
Sbjct: 113 LRINRNRCQYCRLK 126
>AB204559-1|BAD89804.1| 832|Apis mellifera soluble guanylyl cyclase
beta-3 protein.
Length = 832
Score = 20.6 bits (41), Expect = 9.4
Identities = 7/16 (43%), Positives = 8/16 (50%)
Frame = +1
Query: 361 TYFSRSKTNHRTTRCC 408
T KT H+ T CC
Sbjct: 815 TMTKSGKTRHQNTGCC 830
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 148,638
Number of Sequences: 438
Number of extensions: 3499
Number of successful extensions: 14
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 13618701
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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