Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0013_K09
         (525 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X16709-1|CAA34681.1|  162|Apis mellifera phospholipase A-2 protein.    23   1.9  
EF373554-1|ABQ28728.1|  167|Apis mellifera phospholipase A2 prot...    23   1.9  
AF438408-1|AAL30844.1|  167|Apis mellifera phospholipase A2 prot...    23   1.9  
EF531707-1|ABP57431.1|  138|Apis mellifera structural cuticle pr...    22   3.3  
AY268030-1|AAP23055.1|  602|Apis mellifera dorsal protein protein.     22   3.3  
AF094822-1|AAC63381.1|  365|Apis mellifera GABA receptor Rdl sub...    22   3.3  
AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly pro...    22   4.4  

>X16709-1|CAA34681.1|  162|Apis mellifera phospholipase A-2 protein.
          Length = 162

 Score = 23.0 bits (47), Expect = 1.9
 Identities = 10/20 (50%), Positives = 10/20 (50%)
 Frame = +1

Query: 445 CLCSDTSYACLKLLGDFIKS 504
           C C D  Y CLK   D I S
Sbjct: 89  CDCDDKFYDCLKNSADTISS 108


>EF373554-1|ABQ28728.1|  167|Apis mellifera phospholipase A2
           protein.
          Length = 167

 Score = 23.0 bits (47), Expect = 1.9
 Identities = 10/20 (50%), Positives = 10/20 (50%)
 Frame = +1

Query: 445 CLCSDTSYACLKLLGDFIKS 504
           C C D  Y CLK   D I S
Sbjct: 94  CDCDDKFYDCLKNSADTISS 113


>AF438408-1|AAL30844.1|  167|Apis mellifera phospholipase A2
           protein.
          Length = 167

 Score = 23.0 bits (47), Expect = 1.9
 Identities = 10/20 (50%), Positives = 10/20 (50%)
 Frame = +1

Query: 445 CLCSDTSYACLKLLGDFIKS 504
           C C D  Y CLK   D I S
Sbjct: 94  CDCDDKFYDCLKNSADTISS 113


>EF531707-1|ABP57431.1|  138|Apis mellifera structural cuticle
          protein protein.
          Length = 138

 Score = 22.2 bits (45), Expect = 3.3
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = -3

Query: 91 TTSVWSAPCRPLGGATR 41
          TT+  +AP RP GGA +
Sbjct: 9  TTATLAAPQRPSGGADK 25


>AY268030-1|AAP23055.1|  602|Apis mellifera dorsal protein protein.
          Length = 602

 Score = 22.2 bits (45), Expect = 3.3
 Identities = 9/27 (33%), Positives = 12/27 (44%)
 Frame = -3

Query: 484 VTLNMHNSYHCINKITVYLSVRNCTNI 404
           VT N H  +  +N     +   N TNI
Sbjct: 483 VTSNYHEEFQSLNNAVGEMEATNVTNI 509


>AF094822-1|AAC63381.1|  365|Apis mellifera GABA receptor Rdl
           subunit protein.
          Length = 365

 Score = 22.2 bits (45), Expect = 3.3
 Identities = 10/22 (45%), Positives = 12/22 (54%)
 Frame = +3

Query: 222 GALGERGDAAAPWRRRFEVHVP 287
           G  G+ GD A     RF+VH P
Sbjct: 275 GVPGDHGDHAPKQTVRFKVHDP 296


>AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly
           protein 8 protein.
          Length = 416

 Score = 21.8 bits (44), Expect = 4.4
 Identities = 8/14 (57%), Positives = 8/14 (57%)
 Frame = -3

Query: 310 PTLAPKPAGTWTSN 269
           P LAP P  TW  N
Sbjct: 100 PLLAPYPDWTWAKN 113


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 153,053
Number of Sequences: 438
Number of extensions: 3108
Number of successful extensions: 8
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14722920
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)