Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0013_K07
         (378 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M22536-1|AAA28998.1|  156|Drosophila melanogaster protein ( D.me...   111   3e-25
BT001653-1|AAN71408.1|  156|Drosophila melanogaster RE44350p pro...   111   3e-25
AE014134-1875|AAF52941.1|  156|Drosophila melanogaster CG5271-PA...   111   3e-25
AE014298-539|ABI30967.1|  604|Drosophila melanogaster CG32792-PD...    27   6.1  

>M22536-1|AAA28998.1|  156|Drosophila melanogaster protein (
           D.melanogaster ubiquitin-hybrid (UB3-D) mRNA, complete
           cds. ).
          Length = 156

 Score =  111 bits (267), Expect = 3e-25
 Identities = 54/90 (60%), Positives = 58/90 (64%), Gaps = 1/90 (1%)
 Frame = +3

Query: 9   LHLVXXXXXXXXXXXXXNYSTPXXXXXXXXXXXLAVLRYYKVDENGKIHRLRRECTGEQC 188
           LHLV             NYSTP           LAVL+YYKVDENGKIHRLRREC GE C
Sbjct: 67  LHLVLRLRGGAKKRKKKNYSTPKKIKHKRKKVKLAVLKYYKVDENGKIHRLRRECPGENC 126

Query: 189 GAGVFMAVMEDRHYCGKCHSTMVF-KDDDK 275
           GAGVFMA  EDRHYCGKC+ T VF K ++K
Sbjct: 127 GAGVFMAAHEDRHYCGKCNLTFVFSKPEEK 156


>BT001653-1|AAN71408.1|  156|Drosophila melanogaster RE44350p
           protein.
          Length = 156

 Score =  111 bits (267), Expect = 3e-25
 Identities = 54/90 (60%), Positives = 58/90 (64%), Gaps = 1/90 (1%)
 Frame = +3

Query: 9   LHLVXXXXXXXXXXXXXNYSTPXXXXXXXXXXXLAVLRYYKVDENGKIHRLRRECTGEQC 188
           LHLV             NYSTP           LAVL+YYKVDENGKIHRLRREC GE C
Sbjct: 67  LHLVLRLRGGAKKRKKKNYSTPKKIKHKRKKVKLAVLKYYKVDENGKIHRLRRECPGENC 126

Query: 189 GAGVFMAVMEDRHYCGKCHSTMVF-KDDDK 275
           GAGVFMA  EDRHYCGKC+ T VF K ++K
Sbjct: 127 GAGVFMAAHEDRHYCGKCNLTFVFSKPEEK 156


>AE014134-1875|AAF52941.1|  156|Drosophila melanogaster CG5271-PA
           protein.
          Length = 156

 Score =  111 bits (267), Expect = 3e-25
 Identities = 54/90 (60%), Positives = 58/90 (64%), Gaps = 1/90 (1%)
 Frame = +3

Query: 9   LHLVXXXXXXXXXXXXXNYSTPXXXXXXXXXXXLAVLRYYKVDENGKIHRLRRECTGEQC 188
           LHLV             NYSTP           LAVL+YYKVDENGKIHRLRREC GE C
Sbjct: 67  LHLVLRLRGGAKKRKKKNYSTPKKIKHKRKKVKLAVLKYYKVDENGKIHRLRRECPGENC 126

Query: 189 GAGVFMAVMEDRHYCGKCHSTMVF-KDDDK 275
           GAGVFMA  EDRHYCGKC+ T VF K ++K
Sbjct: 127 GAGVFMAAHEDRHYCGKCNLTFVFSKPEEK 156


>AE014298-539|ABI30967.1|  604|Drosophila melanogaster CG32792-PD
           protein.
          Length = 604

 Score = 27.5 bits (58), Expect = 6.1
 Identities = 12/43 (27%), Positives = 21/43 (48%)
 Frame = +3

Query: 120 RYYKVDENGKIHRLRRECTGEQCGAGVFMAVMEDRHYCGKCHS 248
           R ++ D +  ++  R + TGE  G  + + V  D +YC    S
Sbjct: 255 RGFQPDGDNPLYPRRAQGTGESLGLSLTLDVQADAYYCSSSSS 297


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,642,569
Number of Sequences: 53049
Number of extensions: 206082
Number of successful extensions: 427
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 422
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 427
length of database: 24,988,368
effective HSP length: 77
effective length of database: 20,903,595
effective search space used: 1003372560
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)