Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0013_K07
         (378 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1 p...    21   6.4  
AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein ...    21   6.4  
U70841-1|AAC47455.1|  377|Apis mellifera ultraviolet sensitive o...    20   8.4  
AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone este...    20   8.4  
AF004168-1|AAC13417.1|  377|Apis mellifera blue-sensitive opsin ...    20   8.4  
AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.           20   8.4  

>Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1
           protein.
          Length = 402

 Score = 20.6 bits (41), Expect = 6.4
 Identities = 5/16 (31%), Positives = 13/16 (81%)
 Frame = -3

Query: 115 TASLTFFFLCLIFLGV 68
           ++S++F+  C++ LG+
Sbjct: 196 SSSISFYVPCIVMLGI 211


>AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein 1
           protein.
          Length = 500

 Score = 20.6 bits (41), Expect = 6.4
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = +3

Query: 135 DENGKIHRLRRECTGEQ 185
           + +GK+HR  R  TGE+
Sbjct: 158 EHSGKLHRHMRIHTGER 174


>U70841-1|AAC47455.1|  377|Apis mellifera ultraviolet sensitive
           opsin protein.
          Length = 377

 Score = 20.2 bits (40), Expect = 8.4
 Identities = 6/8 (75%), Positives = 7/8 (87%)
 Frame = +1

Query: 316 DCCV*WIF 339
           +CCV WIF
Sbjct: 75  NCCVIWIF 82


>AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone
           esterase protein.
          Length = 567

 Score = 20.2 bits (40), Expect = 8.4
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = +3

Query: 111 AVLRYYKVDENGK 149
           A+  YYK+  NGK
Sbjct: 31  AIKGYYKISGNGK 43


>AF004168-1|AAC13417.1|  377|Apis mellifera blue-sensitive opsin
           protein.
          Length = 377

 Score = 20.2 bits (40), Expect = 8.4
 Identities = 6/8 (75%), Positives = 7/8 (87%)
 Frame = +1

Query: 316 DCCV*WIF 339
           +CCV WIF
Sbjct: 75  NCCVIWIF 82


>AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.
          Length = 567

 Score = 20.2 bits (40), Expect = 8.4
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = +3

Query: 111 AVLRYYKVDENGK 149
           A+  YYK+  NGK
Sbjct: 31  AIKGYYKISGNGK 43


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 75,157
Number of Sequences: 438
Number of extensions: 1106
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 51
effective length of database: 124,005
effective search space used:  9176370
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)