Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0013_K03
(535 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC26H8.07c |nda3|ben1, alp12|tubulin beta |Schizosaccharomyces... 221 7e-59
SPBC16A3.15c |nda2||tubulin alpha 1|Schizosaccharomyces pombe|ch... 118 6e-28
SPBC800.05c |tub1|atb2, alp2, ban5|tubulin alpha 2|Schizosacchar... 113 2e-26
SPBC32F12.04 |tug1|gtb1|gamma-tubulin|Schizosaccharomyces pombe|... 103 2e-23
SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 32 0.062
SPCC970.04c |mob2||protein kinase activator Mob2|Schizosaccharom... 29 0.33
SPAC6C3.08 |||gankyrin|Schizosaccharomyces pombe|chr 1|||Manual 29 0.58
SPBC27B12.06 |gpi13||pig-O |Schizosaccharomyces pombe|chr 2|||Ma... 28 0.76
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 27 1.8
SPAC1B3.15c |||membrane transporter|Schizosaccharomyces pombe|ch... 27 2.3
SPCC965.04c |||mitochondrial inner membrane i-AAA protease compl... 26 3.1
SPBC16G5.12c |top3||DNA topoisomerase III|Schizosaccharomyces po... 26 3.1
SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyce... 26 4.1
SPAC17A5.12 |ucp7||UBA/TPR/DNAJ domain protein Ucp7|Schizosaccha... 26 4.1
SPBC21C3.08c |||ornithine aminotransferase|Schizosaccharomyces p... 25 7.1
SPBPB7E8.02 |||PSP1 family protein|Schizosaccharomyces pombe|chr... 25 7.1
SPAC29E6.01 |pof11|SPAC30.05, mug156|F-box protein Pof11|Schizos... 25 7.1
>SPBC26H8.07c |nda3|ben1, alp12|tubulin beta |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 448
Score = 221 bits (539), Expect = 7e-59
Identities = 101/167 (60%), Positives = 121/167 (72%)
Frame = +3
Query: 30 NEESIDFWEIISEEHGIDPTGVYRGTSDLQLERISVYYNEASVATAESGGKYVPRAILLD 209
N+ FW I++EHG+D G+Y GTS+ Q ER++VY+NEA+ GGKYVPRA+L+D
Sbjct: 14 NQVGAAFWSTIADEHGLDSAGIYHGTSEAQHERLNVYFNEAA------GGKYVPRAVLVD 67
Query: 210 LEPGTMDAVRSGGYGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDAVLDVVRKECENC 389
LEPGTMDAV+SG +G LFRPDN ++GQSGAGN WAKGHYTEGAEL DAVLDVVR+E E C
Sbjct: 68 LEPGTMDAVKSGKFGNLFRPDNIIYGQSGAGNIWAKGHYTEGAELADAVLDVVRREAEAC 127
Query: 390 DCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSPK 530
D LQGFQ KIREEYPDR+M T+SV P+PK
Sbjct: 128 DALQGFQLTHSLGGGTGSGMGTLLLSKIREEYPDRMMATFSVAPAPK 174
>SPBC16A3.15c |nda2||tubulin alpha 1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 455
Score = 118 bits (284), Expect = 6e-28
Identities = 60/163 (36%), Positives = 91/163 (55%), Gaps = 2/163 (1%)
Frame = +3
Query: 51 WEIISEEHGIDPTGVYRGTSDLQLERISVYYNEA-SVATAESG-GKYVPRAILLDLEPGT 224
WE+ EHGI P G T + ++ + + Y N+ +E+G GK+VPR+I +DLEP
Sbjct: 21 WELYCLEHGIGPDGF--PTENSEVHKNNSYLNDGFGTFFSETGQGKFVPRSIYVDLEPNV 78
Query: 225 MDAVRSGGYGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDAVLDVVRKECENCDCLQG 404
+D VR+G Y LF P+ V G+ A NN+A+GHYT G E++D+VL+ +R+ +NC LQG
Sbjct: 79 IDQVRTGPYKDLFHPEQMVTGKEDASNNYARGHYTVGKEMIDSVLERIRRMADNCSGLQG 138
Query: 405 FQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSPKV 533
F ++ EY + +SV P+P+V
Sbjct: 139 FLVFHSFGGGTGSGLGALLLERLNMEYGKKSNLQFSVYPAPQV 181
>SPBC800.05c |tub1|atb2, alp2, ban5|tubulin alpha
2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 449
Score = 113 bits (272), Expect = 2e-26
Identities = 60/163 (36%), Positives = 83/163 (50%), Gaps = 2/163 (1%)
Frame = +3
Query: 51 WEIISEEHGIDPTGVYRGTSDLQLER--ISVYYNEASVATAESGGKYVPRAILLDLEPGT 224
WE+ EHGI P G + Q S +++E GKYVPR+I +DLEP
Sbjct: 21 WELYCLEHGIQPNGYMNPETASQNSDGGFSTFFSETGQ------GKYVPRSIYVDLEPNV 74
Query: 225 MDAVRSGGYGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDAVLDVVRKECENCDCLQG 404
+D VR+G Y LF P+ + G+ A NN+A+GHYT G ELVD V D +R+ +NC LQG
Sbjct: 75 IDQVRTGPYRDLFHPEQLITGKEDASNNYARGHYTVGKELVDEVTDKIRRIADNCSGLQG 134
Query: 405 FQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSPKV 533
F ++ EY + +SV P+P+V
Sbjct: 135 FLVFHSFGGGTGSGFGALLLERLAMEYTKKSKLQFSVYPAPQV 177
>SPBC32F12.04 |tug1|gtb1|gamma-tubulin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 446
Score = 103 bits (247), Expect = 2e-23
Identities = 50/167 (29%), Positives = 87/167 (52%), Gaps = 2/167 (1%)
Frame = +3
Query: 30 NEESIDFWEIISEEHGIDPTGVYRGTSDLQLERISVYYNEASVATAESGGKYVPRAILLD 209
N+ FW+ + EHGI P G + ++R V++ ++ +Y+PRAIL+D
Sbjct: 15 NQIGSQFWQQLCLEHGIGPDGTLESFATEGVDRKDVFFYQSDDT------RYIPRAILID 68
Query: 210 LEPGTMDAVRSGGYGQLFRPDNFVFGQS--GAGNNWAKGHYTEGAELVDAVLDVVRKECE 383
LEP ++ + S YG L+ P+N + ++ GAGNNWA G Y+ + + ++D++ +E +
Sbjct: 69 LEPRVVNNILSDTYGSLYNPENILITKNGGGAGNNWANG-YSHAERIFEDIMDMIDREAD 127
Query: 384 NCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPS 524
D L+GF ++ + YP +I+ TYSV P+
Sbjct: 128 GSDSLEGFSLLHSIAGGTGSGLGSFLLERLNDRYPKKIIQTYSVFPN 174
>SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 534
Score = 31.9 bits (69), Expect = 0.062
Identities = 35/171 (20%), Positives = 67/171 (39%)
Frame = +1
Query: 16 TCVS*TKSQLTSGR*YPKSTASTLPAFTGAQAIYNSRESPFIIMRPLLRRRRAVASTCPA 195
T S T S +S P ST+ST+ + + + + ++S S + + + T +
Sbjct: 284 TSTSSTISSSSSSSSSPTSTSSTISSSSSSSSSFSSTLSSSSMSSS---SSFSSSPTSSS 340
Query: 196 PYSSTSNQGPWTPSAPXXXXXXXXXXXXXXXXXXXXXXGLKVTTQKAPNSSMPCST*FAK 375
S+S+ P + S T + +SS P S+
Sbjct: 341 STISSSSSSPSSSSFSSTTSSSKSSSSFSSTVSSSSSTSSSTLTSSSSSSSRPASS---S 397
Query: 376 SARTAIASRDSNSHTPSEAAPAPVWAPFSSQRSVKSTPTES*TRTQSSPRP 528
S ++++S S+S + S +AP +S S S+ + S + + S +P
Sbjct: 398 SHSSSLSSHKSSSSSKSSSAPVSSAFYHNSTSSRSSSHSSSHSLSSLSSKP 448
Score = 30.7 bits (66), Expect = 0.14
Identities = 34/169 (20%), Positives = 65/169 (38%)
Frame = +1
Query: 16 TCVS*TKSQLTSGR*YPKSTASTLPAFTGAQAIYNSRESPFIIMRPLLRRRRAVASTCPA 195
T S + S + S ST+S+L + + + +S S II + +S+ P
Sbjct: 231 TSSSLSTSSIPSTSSSSSSTSSSLSSSSSSSTASSSSSSSSIISSS------SSSSSSPT 284
Query: 196 PYSSTSNQGPWTPSAPXXXXXXXXXXXXXXXXXXXXXXGLKVTTQKAPNSSMPCST*FAK 375
SST + + S+P +++ + +SS S+
Sbjct: 285 STSSTISSSSSSSSSPTSTSSTISSSSSSSSSFSSTLSSSSMSSSSSFSSSPTSSSSTIS 344
Query: 376 SARTAIASRDSNSHTPSEAAPAPVWAPFSSQRSVKSTPTES*TRTQSSP 522
S+ ++ +S +S T S + + + SS S S+ S + + S P
Sbjct: 345 SSSSSPSSSSFSSTTSSSKSSSSFSSTVSSSSSTSSSTLTSSSSSSSRP 393
>SPCC970.04c |mob2||protein kinase activator
Mob2|Schizosaccharomyces pombe|chr 3|||Manual
Length = 244
Score = 29.5 bits (63), Expect = 0.33
Identities = 15/40 (37%), Positives = 21/40 (52%)
Frame = -3
Query: 413 ELESLEAIAVLALFANYVEHGIDEFGAFCVVTFSPVVACA 294
+L+ A+ V LF Y+ H D F FC V PV++ A
Sbjct: 81 DLDEWVALNVYELFT-YLNHFYDVFATFCTVKTCPVMSAA 119
>SPAC6C3.08 |||gankyrin|Schizosaccharomyces pombe|chr 1|||Manual
Length = 234
Score = 28.7 bits (61), Expect = 0.58
Identities = 14/30 (46%), Positives = 18/30 (60%)
Frame = +3
Query: 312 AKGHYTEGAELVDAVLDVVRKECENCDCLQ 401
A+GH G ELV A D +RK+ EN L+
Sbjct: 183 AEGHPDVGVELVRAGADTLRKDSENHTALE 212
>SPBC27B12.06 |gpi13||pig-O |Schizosaccharomyces pombe|chr
2|||Manual
Length = 918
Score = 28.3 bits (60), Expect = 0.76
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = -3
Query: 416 CELESLEAIAVLALFANYVEHGIDEFGAFCVVTF 315
C S A +L + ++YV + +E GAFCV T+
Sbjct: 573 CSTYSALAFILLQVISSYVTNCREEQGAFCVSTY 606
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 27.1 bits (57), Expect = 1.8
Identities = 20/65 (30%), Positives = 31/65 (47%)
Frame = +1
Query: 328 QKAPNSSMPCST*FAKSARTAIASRDSNSHTPSEAAPAPVWAPFSSQRSVKSTPTES*TR 507
Q+ P+S P + + T S+ S +H PS A PAP S ++ S P ++
Sbjct: 1503 QQPPSSVAPATA----PSSTLPPSQSSFAHVPSPAPPAP---QHPSAAALSSAPADNSMP 1555
Query: 508 TQSSP 522
+SSP
Sbjct: 1556 HRSSP 1560
Score = 25.8 bits (54), Expect = 4.1
Identities = 16/53 (30%), Positives = 21/53 (39%)
Frame = +1
Query: 373 KSARTAIASRDSNSHTPSEAAPAPVWAPFSSQRSVKSTPTES*TRTQSSPRPK 531
K TA S + T AP P AP +Q S S +SP+P+
Sbjct: 1316 KQIPTAAVKDPSTTSTSFNTAPIPQQAPLENQFSKMSLEPPVRPAVPTSPKPQ 1368
>SPAC1B3.15c |||membrane transporter|Schizosaccharomyces pombe|chr
1|||Manual
Length = 628
Score = 26.6 bits (56), Expect = 2.3
Identities = 15/36 (41%), Positives = 19/36 (52%)
Frame = +1
Query: 412 SHTPSEAAPAPVWAPFSSQRSVKSTPTES*TRTQSS 519
S +PS A+ P PFSSQ S S P S +S+
Sbjct: 11 SISPSIASSFPTVKPFSSQNSTTSNPELSHIEKESN 46
>SPCC965.04c |||mitochondrial inner membrane i-AAA protease complex
subunit Yme1 |Schizosaccharomyces pombe|chr 3|||Manual
Length = 709
Score = 26.2 bits (55), Expect = 3.1
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = +1
Query: 409 NSHTPSEAAPAPVWAP 456
NS PS P PVWAP
Sbjct: 172 NSMPPSTPTPPPVWAP 187
>SPBC16G5.12c |top3||DNA topoisomerase III|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 622
Score = 26.2 bits (55), Expect = 3.1
Identities = 12/38 (31%), Positives = 21/38 (55%)
Frame = +3
Query: 102 GTSDLQLERISVYYNEASVATAESGGKYVPRAILLDLE 215
G+SD+ + +S + EAS + S VP+ +L D +
Sbjct: 49 GSSDVTMTSVSGHLTEASFPSEYSSWSSVPQDVLFDAQ 86
>SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1036
Score = 25.8 bits (54), Expect = 4.1
Identities = 28/163 (17%), Positives = 53/163 (32%)
Frame = +1
Query: 31 TKSQLTSGR*YPKSTASTLPAFTGAQAIYNSRESPFIIMRPLLRRRRAVASTCPAPYSST 210
+ +Q + P ST S+ P + S S + A ++ + S+
Sbjct: 272 SSAQYNTSSLLPSSTPSSTPLSSANSTTATSASSTPLTSVNSTTTTSASSTPLSSVSSAN 331
Query: 211 SNQGPWTPSAPXXXXXXXXXXXXXXXXXXXXXXGLKVTTQKAPNSSMPCST*FAKSARTA 390
S T S P + P +S+ ++ + S+
Sbjct: 332 STTATSTSSTPLSSVNSTTATSASSTPLTSVNSTTATSASSTPLTSVNSTSATSASSTPL 391
Query: 391 IASRDSNSHTPSEAAPAPVWAPFSSQRSVKSTPTES*TRTQSS 519
++ + S + S AP+ + SV STP S T ++
Sbjct: 392 TSANSTTSTSVSSTAPSYNTSSVLPTSSVSSTPLSSANSTTAT 434
>SPAC17A5.12 |ucp7||UBA/TPR/DNAJ domain protein
Ucp7|Schizosaccharomyces pombe|chr 1|||Manual
Length = 697
Score = 25.8 bits (54), Expect = 4.1
Identities = 12/31 (38%), Positives = 20/31 (64%)
Frame = +1
Query: 403 DSNSHTPSEAAPAPVWAPFSSQRSVKSTPTE 495
++NS TPS + PAPV ++Q +K++ E
Sbjct: 23 NNNSRTPSYSLPAPVAQKKNAQIPLKASKPE 53
>SPBC21C3.08c |||ornithine aminotransferase|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 438
Score = 25.0 bits (52), Expect = 7.1
Identities = 20/59 (33%), Positives = 27/59 (45%), Gaps = 6/59 (10%)
Frame = +3
Query: 87 TGVYRGTSDLQLERISVYYNEASVATAESGGKYV------PRAILLDLEPGTMDAVRSG 245
TGV R L +E +V + + A SGG Y R I+L+ EPGT + G
Sbjct: 250 TGVARTGKMLCIEHSNVKPDVVILGKAISGGVYPVSAVLSSREIMLNFEPGTHGSTYGG 308
>SPBPB7E8.02 |||PSP1 family protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 749
Score = 25.0 bits (52), Expect = 7.1
Identities = 16/64 (25%), Positives = 28/64 (43%)
Frame = +1
Query: 334 APNSSMPCST*FAKSARTAIASRDSNSHTPSEAAPAPVWAPFSSQRSVKSTPTES*TRTQ 513
AP+S+ P S+ F+ A + + + +P P P++ R S P+ S
Sbjct: 344 APDSAPPASSQFSVPFNAAAENINDTPDSVLANSPTPRHLPYTWSRHSTSGPSRSTVLNP 403
Query: 514 SSPR 525
S+ R
Sbjct: 404 STSR 407
>SPAC29E6.01 |pof11|SPAC30.05, mug156|F-box protein
Pof11|Schizosaccharomyces pombe|chr 1|||Manual
Length = 506
Score = 25.0 bits (52), Expect = 7.1
Identities = 14/35 (40%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Frame = +3
Query: 243 GGYGQLFRPDNFVFGQSGAG-NNWAKGHYTEGAEL 344
G YG +F P F+F +G NW+ Y E A L
Sbjct: 157 GPYGTMFLPQQFIFDSNGRPLLNWSY-LYKEHAHL 190
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,863,104
Number of Sequences: 5004
Number of extensions: 32920
Number of successful extensions: 154
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 142
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 147
length of database: 2,362,478
effective HSP length: 68
effective length of database: 2,022,206
effective search space used: 220420454
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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