Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0013_K03
         (535 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.                22   3.4  
AY855337-1|AAW47987.1|  510|Apis mellifera tyrosine hydroxylase ...    21   6.0  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             21   6.0  
AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor p...    21   7.9  

>AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.
          Length = 554

 Score = 22.2 bits (45), Expect = 3.4
 Identities = 14/50 (28%), Positives = 22/50 (44%)
 Frame = +1

Query: 76  ASTLPAFTGAQAIYNSRESPFIIMRPLLRRRRAVASTCPAPYSSTSNQGP 225
           A  +PA  G      + E PF  +   LR  +A  +    P S+T++  P
Sbjct: 50  APNMPAEEGEGMAGVTGEEPFDTLDTFLRELQADLAEASQPTSTTTSVTP 99


>AY855337-1|AAW47987.1|  510|Apis mellifera tyrosine hydroxylase
           protein.
          Length = 510

 Score = 21.4 bits (43), Expect = 6.0
 Identities = 9/14 (64%), Positives = 12/14 (85%)
 Frame = -3

Query: 296 AGLTEDEVVWAEEL 255
           AGLTE+EVV A+ +
Sbjct: 62  AGLTEEEVVLAKTI 75


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 21.4 bits (43), Expect = 6.0
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = +1

Query: 181 STCPAPYSSTSNQGPWTPSA 240
           +T   P +S +  GP TPSA
Sbjct: 224 ATTTLPAASATGTGPATPSA 243


>AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor
           protein.
          Length = 587

 Score = 21.0 bits (42), Expect = 7.9
 Identities = 8/23 (34%), Positives = 10/23 (43%)
 Frame = +1

Query: 160 RRRRAVASTCPAPYSSTSNQGPW 228
           + R   A+ C A Y      GPW
Sbjct: 42  KMRELNATACAALYERVEWSGPW 64


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 130,529
Number of Sequences: 438
Number of extensions: 2418
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 15090993
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)