Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0013_J24
         (507 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U62892-1|AAC47284.1| 3351|Drosophila melanogaster retinoid- and ...    61   1e-09
AE014135-185|AAF59387.2| 3351|Drosophila melanogaster CG11064-PA...    61   1e-09
BT025088-1|ABE73259.1| 1074|Drosophila melanogaster IP14091p pro...    38   0.010
BT010303-1|AAQ23621.1|  536|Drosophila melanogaster LD04013p pro...    29   2.7  
AF177464-1|AAD55946.1|  562|Drosophila melanogaster Tob homolog ...    29   2.7  
AE014298-2329|AAS65384.1|  564|Drosophila melanogaster CG9214-PB...    29   2.7  
AE014298-2328|AAF48563.1|  564|Drosophila melanogaster CG9214-PA...    29   2.7  
AY058433-1|AAL13662.1| 1329|Drosophila melanogaster GH21134p pro...    28   6.3  
AF188475-1|AAF37818.1| 1329|Drosophila melanogaster PDZ domain p...    28   6.3  
AF188474-1|AAF37817.1| 1329|Drosophila melanogaster PDZ domain p...    28   6.3  
AF188473-1|AAF37816.1| 1329|Drosophila melanogaster PDZ domain p...    28   6.3  
AE013599-3348|AAX52678.1| 1329|Drosophila melanogaster CG6741-PC...    28   6.3  
AE013599-3347|AAF46809.2| 1329|Drosophila melanogaster CG6741-PB...    28   6.3  
AE013599-3346|AAF46810.2| 1329|Drosophila melanogaster CG6741-PA...    28   6.3  
AY118689-1|AAM50549.1|  893|Drosophila melanogaster AT15637p pro...    28   8.3  
AE013599-3102|AAM68188.1|  889|Drosophila melanogaster CG10543-P...    28   8.3  
AE013599-3101|AAO41340.1| 1024|Drosophila melanogaster CG10543-P...    28   8.3  
AE013599-3100|AAF46652.3| 1634|Drosophila melanogaster CG10543-P...    28   8.3  

>U62892-1|AAC47284.1| 3351|Drosophila melanogaster retinoid- and fatty
            acid-bindingglycoprotein protein.
          Length = 3351

 Score = 60.9 bits (141), Expect = 1e-09
 Identities = 38/142 (26%), Positives = 66/142 (46%), Gaps = 1/142 (0%)
 Frame = +1

Query: 10   DFRLPNGKICTSESEFGNAYSLARSCPKVQTPEHSHHQMHAAL-PPACEQVFGGISPLRP 186
            DF L +G +  + +  GN Y + + C  +   E  ++Q  ++     C ++FG  S L  
Sbjct: 2925 DFLLIDGTLAENSAALGNDYGVGK-CTAI---EFDNNQFKSSKREEMCSELFGIESTLAF 2980

Query: 187  ISLLLDITPFRQACIHAVSGTDAAKDLHQACDLARGYAALALTGLLPAVLPDACVRCTDA 366
              + LD  P+R+AC  A++     +    AC  A  Y +         +LP  C++C   
Sbjct: 2981 NFITLDSRPYRKACDIALAKVAEKEKEATACTFALAYGSAVKQINKWVLLPPRCIKCAGP 3040

Query: 367  DKPHAIGDVYQLKVPNKQADIV 432
               H  GD + +K+PN + D+V
Sbjct: 3041 AGQHDFGDEFTVKLPNNKVDVV 3062


>AE014135-185|AAF59387.2| 3351|Drosophila melanogaster CG11064-PA
            protein.
          Length = 3351

 Score = 60.9 bits (141), Expect = 1e-09
 Identities = 38/142 (26%), Positives = 66/142 (46%), Gaps = 1/142 (0%)
 Frame = +1

Query: 10   DFRLPNGKICTSESEFGNAYSLARSCPKVQTPEHSHHQMHAAL-PPACEQVFGGISPLRP 186
            DF L +G +  + +  GN Y + + C  +   E  ++Q  ++     C ++FG  S L  
Sbjct: 2925 DFLLIDGTLAENSAALGNDYGVGK-CTAI---EFDNNQFKSSKRQEMCSELFGIESTLAF 2980

Query: 187  ISLLLDITPFRQACIHAVSGTDAAKDLHQACDLARGYAALALTGLLPAVLPDACVRCTDA 366
              + LD  P+R+AC  A++     +    AC  A  Y +         +LP  C++C   
Sbjct: 2981 NFITLDSRPYRKACDIALAKVAEKEKEATACTFALAYGSAVKQINKWVLLPPRCIKCAGP 3040

Query: 367  DKPHAIGDVYQLKVPNKQADIV 432
               H  GD + +K+PN + D+V
Sbjct: 3041 AGQHDFGDEFTVKLPNNKVDVV 3062


>BT025088-1|ABE73259.1| 1074|Drosophila melanogaster IP14091p
           protein.
          Length = 1074

 Score = 37.5 bits (83), Expect = 0.010
 Identities = 16/53 (30%), Positives = 25/53 (47%)
 Frame = +1

Query: 274 ACDLARGYAALALTGLLPAVLPDACVRCTDADKPHAIGDVYQLKVPNKQADIV 432
           AC  A  Y +         +LP  C++C      H  GD + +K+PN + D+V
Sbjct: 733 ACTFALAYGSAVKQINKWVLLPPRCIKCAGPAGQHDFGDEFTVKLPNNKVDVV 785


>BT010303-1|AAQ23621.1|  536|Drosophila melanogaster LD04013p
           protein.
          Length = 536

 Score = 29.5 bits (63), Expect = 2.7
 Identities = 12/26 (46%), Positives = 18/26 (69%)
 Frame = -1

Query: 360 GAAHASVRQHSRQQSREGQRRVSSRQ 283
           G  HA+ +QHS+QQ+R G  R +S +
Sbjct: 383 GNGHANTQQHSQQQTRVGMDRPNSSE 408


>AF177464-1|AAD55946.1|  562|Drosophila melanogaster Tob homolog
           protein.
          Length = 562

 Score = 29.5 bits (63), Expect = 2.7
 Identities = 12/26 (46%), Positives = 18/26 (69%)
 Frame = -1

Query: 360 GAAHASVRQHSRQQSREGQRRVSSRQ 283
           G  HA+ +QHS+QQ+R G  R +S +
Sbjct: 407 GNGHANTQQHSQQQTRVGMDRPNSSE 432


>AE014298-2329|AAS65384.1|  564|Drosophila melanogaster CG9214-PB,
           isoform B protein.
          Length = 564

 Score = 29.5 bits (63), Expect = 2.7
 Identities = 12/26 (46%), Positives = 18/26 (69%)
 Frame = -1

Query: 360 GAAHASVRQHSRQQSREGQRRVSSRQ 283
           G  HA+ +QHS+QQ+R G  R +S +
Sbjct: 411 GNGHANTQQHSQQQTRVGMDRPNSSE 436


>AE014298-2328|AAF48563.1|  564|Drosophila melanogaster CG9214-PA,
           isoform A protein.
          Length = 564

 Score = 29.5 bits (63), Expect = 2.7
 Identities = 12/26 (46%), Positives = 18/26 (69%)
 Frame = -1

Query: 360 GAAHASVRQHSRQQSREGQRRVSSRQ 283
           G  HA+ +QHS+QQ+R G  R +S +
Sbjct: 411 GNGHANTQQHSQQQTRVGMDRPNSSE 436


>AY058433-1|AAL13662.1| 1329|Drosophila melanogaster GH21134p
           protein.
          Length = 1329

 Score = 28.3 bits (60), Expect = 6.3
 Identities = 21/69 (30%), Positives = 32/69 (46%), Gaps = 2/69 (2%)
 Frame = -2

Query: 257 AASVPDTAWMHACLNGVISNNRLIGRSGEIPPNTCSQAGGRAACIWWWECS--GVWTLGQ 84
           ++S  D A + +CL    S+    G  G  PP++ +  GG  A     + S  G +    
Sbjct: 538 SSSCDDIAKVSSCLTASTSSGSAAGSLGS-PPSSAAAGGGGTANSGQHDPSRRGAFPYAF 596

Query: 83  LRARLYALP 57
           LR+RL  LP
Sbjct: 597 LRSRLSVLP 605


>AF188475-1|AAF37818.1| 1329|Drosophila melanogaster PDZ domain
           protein Arc protein.
          Length = 1329

 Score = 28.3 bits (60), Expect = 6.3
 Identities = 21/69 (30%), Positives = 32/69 (46%), Gaps = 2/69 (2%)
 Frame = -2

Query: 257 AASVPDTAWMHACLNGVISNNRLIGRSGEIPPNTCSQAGGRAACIWWWECS--GVWTLGQ 84
           ++S  D A + +CL    S+    G  G  PP++ +  GG  A     + S  G +    
Sbjct: 538 SSSCDDIAKVSSCLTASTSSGSAAGSLGS-PPSSAAAGGGGTANSGQHDPSRRGAFPYAF 596

Query: 83  LRARLYALP 57
           LR+RL  LP
Sbjct: 597 LRSRLSVLP 605


>AF188474-1|AAF37817.1| 1329|Drosophila melanogaster PDZ domain
           protein Arc protein.
          Length = 1329

 Score = 28.3 bits (60), Expect = 6.3
 Identities = 21/69 (30%), Positives = 32/69 (46%), Gaps = 2/69 (2%)
 Frame = -2

Query: 257 AASVPDTAWMHACLNGVISNNRLIGRSGEIPPNTCSQAGGRAACIWWWECS--GVWTLGQ 84
           ++S  D A + +CL    S+    G  G  PP++ +  GG  A     + S  G +    
Sbjct: 538 SSSCDDIAKVSSCLTASTSSGSAAGSLGS-PPSSAAAGGGGTANSGQHDPSRRGAFPYAF 596

Query: 83  LRARLYALP 57
           LR+RL  LP
Sbjct: 597 LRSRLSVLP 605


>AF188473-1|AAF37816.1| 1329|Drosophila melanogaster PDZ domain
           protein Arc protein.
          Length = 1329

 Score = 28.3 bits (60), Expect = 6.3
 Identities = 21/69 (30%), Positives = 32/69 (46%), Gaps = 2/69 (2%)
 Frame = -2

Query: 257 AASVPDTAWMHACLNGVISNNRLIGRSGEIPPNTCSQAGGRAACIWWWECS--GVWTLGQ 84
           ++S  D A + +CL    S+    G  G  PP++ +  GG  A     + S  G +    
Sbjct: 538 SSSCDDIAKVSSCLTASTSSGSAAGSLGS-PPSSAAAGGGGTANSGQHDPSRRGAFPYAF 596

Query: 83  LRARLYALP 57
           LR+RL  LP
Sbjct: 597 LRSRLSVLP 605


>AE013599-3348|AAX52678.1| 1329|Drosophila melanogaster CG6741-PC,
           isoform C protein.
          Length = 1329

 Score = 28.3 bits (60), Expect = 6.3
 Identities = 21/69 (30%), Positives = 32/69 (46%), Gaps = 2/69 (2%)
 Frame = -2

Query: 257 AASVPDTAWMHACLNGVISNNRLIGRSGEIPPNTCSQAGGRAACIWWWECS--GVWTLGQ 84
           ++S  D A + +CL    S+    G  G  PP++ +  GG  A     + S  G +    
Sbjct: 538 SSSCDDIAKVSSCLTASTSSGSAAGSLGS-PPSSAAAGGGGTANSGQHDPSRRGAFPYAF 596

Query: 83  LRARLYALP 57
           LR+RL  LP
Sbjct: 597 LRSRLSVLP 605


>AE013599-3347|AAF46809.2| 1329|Drosophila melanogaster CG6741-PB,
           isoform B protein.
          Length = 1329

 Score = 28.3 bits (60), Expect = 6.3
 Identities = 21/69 (30%), Positives = 32/69 (46%), Gaps = 2/69 (2%)
 Frame = -2

Query: 257 AASVPDTAWMHACLNGVISNNRLIGRSGEIPPNTCSQAGGRAACIWWWECS--GVWTLGQ 84
           ++S  D A + +CL    S+    G  G  PP++ +  GG  A     + S  G +    
Sbjct: 538 SSSCDDIAKVSSCLTASTSSGSAAGSLGS-PPSSAAAGGGGTANSGQHDPSRRGAFPYAF 596

Query: 83  LRARLYALP 57
           LR+RL  LP
Sbjct: 597 LRSRLSVLP 605


>AE013599-3346|AAF46810.2| 1329|Drosophila melanogaster CG6741-PA,
           isoform A protein.
          Length = 1329

 Score = 28.3 bits (60), Expect = 6.3
 Identities = 21/69 (30%), Positives = 32/69 (46%), Gaps = 2/69 (2%)
 Frame = -2

Query: 257 AASVPDTAWMHACLNGVISNNRLIGRSGEIPPNTCSQAGGRAACIWWWECS--GVWTLGQ 84
           ++S  D A + +CL    S+    G  G  PP++ +  GG  A     + S  G +    
Sbjct: 538 SSSCDDIAKVSSCLTASTSSGSAAGSLGS-PPSSAAAGGGGTANSGQHDPSRRGAFPYAF 596

Query: 83  LRARLYALP 57
           LR+RL  LP
Sbjct: 597 LRSRLSVLP 605


>AY118689-1|AAM50549.1|  893|Drosophila melanogaster AT15637p
           protein.
          Length = 893

 Score = 27.9 bits (59), Expect = 8.3
 Identities = 13/45 (28%), Positives = 24/45 (53%), Gaps = 4/45 (8%)
 Frame = +1

Query: 34  ICTSESE----FGNAYSLARSCPKVQTPEHSHHQMHAALPPACEQ 156
           + TSES+    +  +++  +  P  Q P+++ HQ H   PP  +Q
Sbjct: 341 VSTSESQQNSIYNQSFNAEKQQPGQQQPQNALHQQHPTPPPPQQQ 385


>AE013599-3102|AAM68188.1|  889|Drosophila melanogaster CG10543-PB,
           isoform B protein.
          Length = 889

 Score = 27.9 bits (59), Expect = 8.3
 Identities = 13/45 (28%), Positives = 24/45 (53%), Gaps = 4/45 (8%)
 Frame = +1

Query: 34  ICTSESE----FGNAYSLARSCPKVQTPEHSHHQMHAALPPACEQ 156
           + TSES+    +  +++  +  P  Q P+++ HQ H   PP  +Q
Sbjct: 341 VSTSESQQNSIYNQSFNAEKQQPGQQQPQNTLHQQHPTPPPPQQQ 385


>AE013599-3101|AAO41340.1| 1024|Drosophila melanogaster CG10543-PC,
           isoform C protein.
          Length = 1024

 Score = 27.9 bits (59), Expect = 8.3
 Identities = 13/45 (28%), Positives = 24/45 (53%), Gaps = 4/45 (8%)
 Frame = +1

Query: 34  ICTSESE----FGNAYSLARSCPKVQTPEHSHHQMHAALPPACEQ 156
           + TSES+    +  +++  +  P  Q P+++ HQ H   PP  +Q
Sbjct: 476 VSTSESQQNSIYNQSFNAEKQQPGQQQPQNTLHQQHPTPPPPQQQ 520


>AE013599-3100|AAF46652.3| 1634|Drosophila melanogaster CG10543-PA,
            isoform A protein.
          Length = 1634

 Score = 27.9 bits (59), Expect = 8.3
 Identities = 13/45 (28%), Positives = 24/45 (53%), Gaps = 4/45 (8%)
 Frame = +1

Query: 34   ICTSESE----FGNAYSLARSCPKVQTPEHSHHQMHAALPPACEQ 156
            + TSES+    +  +++  +  P  Q P+++ HQ H   PP  +Q
Sbjct: 1086 VSTSESQQNSIYNQSFNAEKQQPGQQQPQNTLHQQHPTPPPPQQQ 1130


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,627,221
Number of Sequences: 53049
Number of extensions: 510185
Number of successful extensions: 1880
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1758
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1877
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1825511424
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)