Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0013_J18
(534 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT023923-1|ABB36427.1| 560|Drosophila melanogaster RH04128p pro... 231 4e-61
AY119563-1|AAM50217.1| 235|Drosophila melanogaster GM13889p pro... 231 4e-61
AE014297-3351|AAF56158.1| 560|Drosophila melanogaster CG10161-P... 231 4e-61
AF220363-1|AAF37264.1| 560|Drosophila melanogaster eukaryotic t... 229 2e-60
AY119516-1|AAM50170.1| 551|Drosophila melanogaster GH14470p pro... 215 3e-56
AE014297-1458|AAF54756.1| 551|Drosophila melanogaster CG4810-PA... 215 3e-56
BT023016-1|AAY55432.1| 176|Drosophila melanogaster IP04080p pro... 29 5.3
DQ162845-1|ABA42953.1| 1715|Drosophila melanogaster TRF2 protein. 28 7.0
BT015268-1|AAT94497.1| 1500|Drosophila melanogaster LD29768p pro... 28 9.2
BT001602-1|AAN71357.1| 686|Drosophila melanogaster RE30283p pro... 28 9.2
AY113491-1|AAM29496.1| 694|Drosophila melanogaster RE48269p pro... 28 9.2
AY069603-1|AAL39748.2| 1876|Drosophila melanogaster LD36178p pro... 28 9.2
AJ320236-1|CAC44472.1| 1500|Drosophila melanogaster host cell fa... 28 9.2
AF251006-1|AAK28427.1| 1500|Drosophila melanogaster host cell fa... 28 9.2
AF172995-1|AAD48498.1| 1847|Drosophila melanogaster gigas protei... 28 9.2
AE014296-3279|AAF49066.1| 1847|Drosophila melanogaster CG6975-PA... 28 9.2
AE014135-74|AAS64608.1| 1500|Drosophila melanogaster CG1710-PD, ... 28 9.2
AE014135-73|AAN06530.1| 1500|Drosophila melanogaster CG1710-PC, ... 28 9.2
AE014135-72|AAN06529.1| 1500|Drosophila melanogaster CG1710-PB, ... 28 9.2
AE014135-71|AAF59349.2| 1500|Drosophila melanogaster CG1710-PA, ... 28 9.2
AE014134-1779|AAF52873.2| 694|Drosophila melanogaster CG4901-PA... 28 9.2
>BT023923-1|ABB36427.1| 560|Drosophila melanogaster RH04128p
protein.
Length = 560
Score = 231 bits (565), Expect = 4e-61
Identities = 109/156 (69%), Positives = 126/156 (80%)
Frame = +1
Query: 10 RYRKWNLNNGVVLVARCEHDAVMQGPQNETQFLTIKALNEWDSKLANGVEWRQKLDTQRG 189
RY+KW L + +VLVARCEHD V+Q P E QF+TIKALNEWDSKLANGVEWRQKLDTQRG
Sbjct: 366 RYKKWELGSDIVLVARCEHDGVLQTPSGEPQFMTIKALNEWDSKLANGVEWRQKLDTQRG 425
Query: 190 AVLANELRNNSCKLAKWTVQALLAGSDQIKFGYVSRSQVRDNSRHVILGTQQFKPHEFAS 369
AVLANELRNN+CKLAKWTVQA+LAGSDQ+K GYVSR RD+SRHVILGTQQFKPHEFA+
Sbjct: 426 AVLANELRNNACKLAKWTVQAVLAGSDQLKLGYVSRINPRDHSRHVILGTQQFKPHEFAT 485
Query: 370 QINLSMGPSVGHPALFDRLLLETEGRKVLDYEGPEQ 477
QINLSM + G L+++ + K L + P +
Sbjct: 486 QINLSMDNAWGILRCIIDLVMKQKDGKYLIMKDPNK 521
Score = 89.8 bits (213), Expect = 2e-18
Identities = 38/48 (79%), Positives = 42/48 (87%)
Frame = +2
Query: 389 DQAWAILPCLIDFCLKQKDGKYLIMKDPNKPLIRLYDIPDNTFESDAS 532
D AW IL C+ID +KQKDGKYLIMKDPNKP+IRLYDIPDNTF+SD S
Sbjct: 492 DNAWGILRCIIDLVMKQKDGKYLIMKDPNKPIIRLYDIPDNTFDSDDS 539
>AY119563-1|AAM50217.1| 235|Drosophila melanogaster GM13889p
protein.
Length = 235
Score = 231 bits (565), Expect = 4e-61
Identities = 109/156 (69%), Positives = 126/156 (80%)
Frame = +1
Query: 10 RYRKWNLNNGVVLVARCEHDAVMQGPQNETQFLTIKALNEWDSKLANGVEWRQKLDTQRG 189
RY+KW L + +VLVARCEHD V+Q P E QF+TIKALNEWDSKLANGVEWRQKLDTQRG
Sbjct: 41 RYKKWELGSDIVLVARCEHDGVLQTPSGEPQFMTIKALNEWDSKLANGVEWRQKLDTQRG 100
Query: 190 AVLANELRNNSCKLAKWTVQALLAGSDQIKFGYVSRSQVRDNSRHVILGTQQFKPHEFAS 369
AVLANELRNN+CKLAKWTVQA+LAGSDQ+K GYVSR RD+SRHVILGTQQFKPHEFA+
Sbjct: 101 AVLANELRNNACKLAKWTVQAVLAGSDQLKLGYVSRINPRDHSRHVILGTQQFKPHEFAT 160
Query: 370 QINLSMGPSVGHPALFDRLLLETEGRKVLDYEGPEQ 477
QINLSM + G L+++ + K L + P +
Sbjct: 161 QINLSMDNAWGILRCIIDLVMKQKDGKYLIMKDPNK 196
Score = 89.8 bits (213), Expect = 2e-18
Identities = 38/48 (79%), Positives = 42/48 (87%)
Frame = +2
Query: 389 DQAWAILPCLIDFCLKQKDGKYLIMKDPNKPLIRLYDIPDNTFESDAS 532
D AW IL C+ID +KQKDGKYLIMKDPNKP+IRLYDIPDNTF+SD S
Sbjct: 167 DNAWGILRCIIDLVMKQKDGKYLIMKDPNKPIIRLYDIPDNTFDSDDS 214
>AE014297-3351|AAF56158.1| 560|Drosophila melanogaster CG10161-PB
protein.
Length = 560
Score = 231 bits (565), Expect = 4e-61
Identities = 109/156 (69%), Positives = 126/156 (80%)
Frame = +1
Query: 10 RYRKWNLNNGVVLVARCEHDAVMQGPQNETQFLTIKALNEWDSKLANGVEWRQKLDTQRG 189
RY+KW L + +VLVARCEHD V+Q P E QF+TIKALNEWDSKLANGVEWRQKLDTQRG
Sbjct: 366 RYKKWELGSDIVLVARCEHDGVLQTPSGEPQFMTIKALNEWDSKLANGVEWRQKLDTQRG 425
Query: 190 AVLANELRNNSCKLAKWTVQALLAGSDQIKFGYVSRSQVRDNSRHVILGTQQFKPHEFAS 369
AVLANELRNN+CKLAKWTVQA+LAGSDQ+K GYVSR RD+SRHVILGTQQFKPHEFA+
Sbjct: 426 AVLANELRNNACKLAKWTVQAVLAGSDQLKLGYVSRINPRDHSRHVILGTQQFKPHEFAT 485
Query: 370 QINLSMGPSVGHPALFDRLLLETEGRKVLDYEGPEQ 477
QINLSM + G L+++ + K L + P +
Sbjct: 486 QINLSMDNAWGILRCIIDLVMKQKDGKYLIMKDPNK 521
Score = 89.8 bits (213), Expect = 2e-18
Identities = 38/48 (79%), Positives = 42/48 (87%)
Frame = +2
Query: 389 DQAWAILPCLIDFCLKQKDGKYLIMKDPNKPLIRLYDIPDNTFESDAS 532
D AW IL C+ID +KQKDGKYLIMKDPNKP+IRLYDIPDNTF+SD S
Sbjct: 492 DNAWGILRCIIDLVMKQKDGKYLIMKDPNKPIIRLYDIPDNTFDSDDS 539
>AF220363-1|AAF37264.1| 560|Drosophila melanogaster eukaryotic
translation initiationfactor 3 p66 subunit protein.
Length = 560
Score = 229 bits (559), Expect = 2e-60
Identities = 108/156 (69%), Positives = 125/156 (80%)
Frame = +1
Query: 10 RYRKWNLNNGVVLVARCEHDAVMQGPQNETQFLTIKALNEWDSKLANGVEWRQKLDTQRG 189
RY+KW L + +VLVARCEHD V+Q P E QF+TIKALNEWDSKLANGVEWRQKLDTQRG
Sbjct: 366 RYKKWELGSDIVLVARCEHDGVLQTPSGEPQFMTIKALNEWDSKLANGVEWRQKLDTQRG 425
Query: 190 AVLANELRNNSCKLAKWTVQALLAGSDQIKFGYVSRSQVRDNSRHVILGTQQFKPHEFAS 369
AVLANELRN +CKLAKWTVQA+LAGSDQ+K GYVSR RD+SRHVILGTQQFKPHEFA+
Sbjct: 426 AVLANELRNKACKLAKWTVQAVLAGSDQLKLGYVSRINPRDHSRHVILGTQQFKPHEFAT 485
Query: 370 QINLSMGPSVGHPALFDRLLLETEGRKVLDYEGPEQ 477
QINLSM + G L+++ + K L + P +
Sbjct: 486 QINLSMDNAWGILRCIIDLVMKQKDGKYLIMKDPNK 521
Score = 89.8 bits (213), Expect = 2e-18
Identities = 38/48 (79%), Positives = 42/48 (87%)
Frame = +2
Query: 389 DQAWAILPCLIDFCLKQKDGKYLIMKDPNKPLIRLYDIPDNTFESDAS 532
D AW IL C+ID +KQKDGKYLIMKDPNKP+IRLYDIPDNTF+SD S
Sbjct: 492 DNAWGILRCIIDLVMKQKDGKYLIMKDPNKPIIRLYDIPDNTFDSDDS 539
>AY119516-1|AAM50170.1| 551|Drosophila melanogaster GH14470p
protein.
Length = 551
Score = 215 bits (525), Expect = 3e-56
Identities = 98/150 (65%), Positives = 124/150 (82%), Gaps = 1/150 (0%)
Frame = +1
Query: 10 RYRKWNLNNGVVLVARCEHDAVMQGPQNETQFLTIKALNEWDSKLANGVEWRQKLDTQRG 189
RYR+W+L N VVL+ARC+H+ V+QGP + QFL+IKALNEWDSK+ N VEWRQKLDTQRG
Sbjct: 363 RYRQWDLGNDVVLIARCKHNGVIQGPNGDVQFLSIKALNEWDSKVTNSVEWRQKLDTQRG 422
Query: 190 AVLANELRNNSCKLAKWTVQALLAGSDQIKFGYVSRSQVRDNSRHVILGTQQFKPHEFAS 369
AVLA+ELRNN+CKLA+WTV+A+LAGSDQ+K GYVSR RD+ RHVILGTQQFKP EFA+
Sbjct: 423 AVLASELRNNACKLARWTVEAVLAGSDQLKLGYVSRMNPRDHLRHVILGTQQFKPQEFAT 482
Query: 370 QINLSMGPSVG-HPALFDRLLLETEGRKVL 456
QINL+M + G L D ++ + +G+ ++
Sbjct: 483 QINLNMDNAWGVLRCLIDLVMRQPDGKYLI 512
Score = 81.8 bits (193), Expect = 5e-16
Identities = 32/46 (69%), Positives = 39/46 (84%)
Frame = +2
Query: 389 DQAWAILPCLIDFCLKQKDGKYLIMKDPNKPLIRLYDIPDNTFESD 526
D AW +L CLID ++Q DGKYLIMKDPNKP+IRLYD+P+N F+SD
Sbjct: 489 DNAWGVLRCLIDLVMRQPDGKYLIMKDPNKPMIRLYDVPENAFDSD 534
>AE014297-1458|AAF54756.1| 551|Drosophila melanogaster CG4810-PA
protein.
Length = 551
Score = 215 bits (525), Expect = 3e-56
Identities = 98/150 (65%), Positives = 124/150 (82%), Gaps = 1/150 (0%)
Frame = +1
Query: 10 RYRKWNLNNGVVLVARCEHDAVMQGPQNETQFLTIKALNEWDSKLANGVEWRQKLDTQRG 189
RYR+W+L N VVL+ARC+H+ V+QGP + QFL+IKALNEWDSK+ N VEWRQKLDTQRG
Sbjct: 363 RYRQWDLGNDVVLIARCKHNGVIQGPNGDVQFLSIKALNEWDSKVTNSVEWRQKLDTQRG 422
Query: 190 AVLANELRNNSCKLAKWTVQALLAGSDQIKFGYVSRSQVRDNSRHVILGTQQFKPHEFAS 369
AVLA+ELRNN+CKLA+WTV+A+LAGSDQ+K GYVSR RD+ RHVILGTQQFKP EFA+
Sbjct: 423 AVLASELRNNACKLARWTVEAVLAGSDQLKLGYVSRMNPRDHLRHVILGTQQFKPQEFAT 482
Query: 370 QINLSMGPSVG-HPALFDRLLLETEGRKVL 456
QINL+M + G L D ++ + +G+ ++
Sbjct: 483 QINLNMDNAWGVLRCLIDLVMRQPDGKYLI 512
Score = 81.8 bits (193), Expect = 5e-16
Identities = 32/46 (69%), Positives = 39/46 (84%)
Frame = +2
Query: 389 DQAWAILPCLIDFCLKQKDGKYLIMKDPNKPLIRLYDIPDNTFESD 526
D AW +L CLID ++Q DGKYLIMKDPNKP+IRLYD+P+N F+SD
Sbjct: 489 DNAWGVLRCLIDLVMRQPDGKYLIMKDPNKPMIRLYDVPENAFDSD 534
>BT023016-1|AAY55432.1| 176|Drosophila melanogaster IP04080p
protein.
Length = 176
Score = 28.7 bits (61), Expect = 5.3
Identities = 15/44 (34%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Frame = -1
Query: 132 PFVERLDRQEL-GLVLRALHYCVVFAPGHQHNTVVQVPFPVAAS 4
PF+ + +Q +V+ AL CV PG H + +P PV A+
Sbjct: 3 PFITEVPKQVAKAVVICALIACVAAKPGLLHTPLAALPAPVIAA 46
>DQ162845-1|ABA42953.1| 1715|Drosophila melanogaster TRF2 protein.
Length = 1715
Score = 28.3 bits (60), Expect = 7.0
Identities = 17/56 (30%), Positives = 25/56 (44%)
Frame = +3
Query: 9 PLPEMELEQRCCVGGQVRTRRSNAGPSERDPVPDDQGAQRMGLEAGERCRVAPETG 176
P PE ++Q G V + G ++DP P+ + Q + E G APE G
Sbjct: 665 PAPEGGVDQDPAPEGGVDQDPAPEGEVDQDPAPEGESDQDLAPEGGVDQDPAPEFG 720
>BT015268-1|AAT94497.1| 1500|Drosophila melanogaster LD29768p
protein.
Length = 1500
Score = 27.9 bits (59), Expect = 9.2
Identities = 22/76 (28%), Positives = 37/76 (48%), Gaps = 3/76 (3%)
Frame = +1
Query: 256 LAGSDQIKFGYVSRSQVRD---NSRHVILGTQQFKPHEFASQINLSMGPSVGHPALFDRL 426
+ GSD + + S ++ NS H+I Q + H FA++I++ M GH D
Sbjct: 1 MEGSDFVDPAFSSGERISASDLNSEHII----QAENHSFANRISMDMDVPDGHQ--LDSN 54
Query: 427 LLETEGRKVLDYEGPE 474
L ++VL+ GP+
Sbjct: 55 LTGFRWKRVLNPTGPQ 70
>BT001602-1|AAN71357.1| 686|Drosophila melanogaster RE30283p
protein.
Length = 686
Score = 27.9 bits (59), Expect = 9.2
Identities = 22/76 (28%), Positives = 37/76 (48%), Gaps = 3/76 (3%)
Frame = +1
Query: 256 LAGSDQIKFGYVSRSQVRD---NSRHVILGTQQFKPHEFASQINLSMGPSVGHPALFDRL 426
+ GSD + + S ++ NS H+I Q + H FA++I++ M GH D
Sbjct: 1 MEGSDFVDPAFSSGERISASDLNSEHII----QAENHSFANRISMDMDVPDGHQ--LDSN 54
Query: 427 LLETEGRKVLDYEGPE 474
L ++VL+ GP+
Sbjct: 55 LTGFRWKRVLNPTGPQ 70
>AY113491-1|AAM29496.1| 694|Drosophila melanogaster RE48269p
protein.
Length = 694
Score = 27.9 bits (59), Expect = 9.2
Identities = 15/57 (26%), Positives = 26/57 (45%)
Frame = -1
Query: 336 AEYHVTRVVAHLRPRHVAELYLIRSSQ*SLNGPLGELAGVVPQLVGQHGAALRVQFL 166
A Y ++ +PR VA + + R LNG +G+ G + A +++FL
Sbjct: 108 AGYAKNGMIGITQPRRVAAITVARRVAQELNGTIGDTVGYTVRFEDVTSRATKIRFL 164
>AY069603-1|AAL39748.2| 1876|Drosophila melanogaster LD36178p protein.
Length = 1876
Score = 27.9 bits (59), Expect = 9.2
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = -3
Query: 310 RAPATSTRSRTLSDPIQPVEPER 242
+AP+ S S++LSD P+ PER
Sbjct: 1056 KAPSISLNSKSLSDAAPPLSPER 1078
>AJ320236-1|CAC44472.1| 1500|Drosophila melanogaster host cell
factor protein.
Length = 1500
Score = 27.9 bits (59), Expect = 9.2
Identities = 22/76 (28%), Positives = 37/76 (48%), Gaps = 3/76 (3%)
Frame = +1
Query: 256 LAGSDQIKFGYVSRSQVRD---NSRHVILGTQQFKPHEFASQINLSMGPSVGHPALFDRL 426
+ GSD + + S ++ NS H+I Q + H FA++I++ M GH D
Sbjct: 1 MEGSDFVDPAFSSGERISASDLNSEHII----QAENHSFANRISMDMDVPDGHQ--LDSN 54
Query: 427 LLETEGRKVLDYEGPE 474
L ++VL+ GP+
Sbjct: 55 LTGFRWKRVLNPTGPQ 70
>AF251006-1|AAK28427.1| 1500|Drosophila melanogaster host cell
factor HCF protein.
Length = 1500
Score = 27.9 bits (59), Expect = 9.2
Identities = 22/76 (28%), Positives = 37/76 (48%), Gaps = 3/76 (3%)
Frame = +1
Query: 256 LAGSDQIKFGYVSRSQVRD---NSRHVILGTQQFKPHEFASQINLSMGPSVGHPALFDRL 426
+ GSD + + S ++ NS H+I Q + H FA++I++ M GH D
Sbjct: 1 MEGSDFVDPAFSSGERISASDLNSEHII----QAENHSFANRISMDMDVPDGHQ--LDSN 54
Query: 427 LLETEGRKVLDYEGPE 474
L ++VL+ GP+
Sbjct: 55 LTGFRWKRVLNPTGPQ 70
>AF172995-1|AAD48498.1| 1847|Drosophila melanogaster gigas protein
protein.
Length = 1847
Score = 27.9 bits (59), Expect = 9.2
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = -3
Query: 310 RAPATSTRSRTLSDPIQPVEPER 242
+AP+ S S++LSD P+ PER
Sbjct: 1027 KAPSISLNSKSLSDAAPPLSPER 1049
>AE014296-3279|AAF49066.1| 1847|Drosophila melanogaster CG6975-PA
protein.
Length = 1847
Score = 27.9 bits (59), Expect = 9.2
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = -3
Query: 310 RAPATSTRSRTLSDPIQPVEPER 242
+AP+ S S++LSD P+ PER
Sbjct: 1027 KAPSISLNSKSLSDAAPPLSPER 1049
>AE014135-74|AAS64608.1| 1500|Drosophila melanogaster CG1710-PD,
isoform D protein.
Length = 1500
Score = 27.9 bits (59), Expect = 9.2
Identities = 22/76 (28%), Positives = 37/76 (48%), Gaps = 3/76 (3%)
Frame = +1
Query: 256 LAGSDQIKFGYVSRSQVRD---NSRHVILGTQQFKPHEFASQINLSMGPSVGHPALFDRL 426
+ GSD + + S ++ NS H+I Q + H FA++I++ M GH D
Sbjct: 1 MEGSDFVDPAFSSGERISASDLNSEHII----QAENHSFANRISMDMDVPDGHQ--LDSN 54
Query: 427 LLETEGRKVLDYEGPE 474
L ++VL+ GP+
Sbjct: 55 LTGFRWKRVLNPTGPQ 70
>AE014135-73|AAN06530.1| 1500|Drosophila melanogaster CG1710-PC,
isoform C protein.
Length = 1500
Score = 27.9 bits (59), Expect = 9.2
Identities = 22/76 (28%), Positives = 37/76 (48%), Gaps = 3/76 (3%)
Frame = +1
Query: 256 LAGSDQIKFGYVSRSQVRD---NSRHVILGTQQFKPHEFASQINLSMGPSVGHPALFDRL 426
+ GSD + + S ++ NS H+I Q + H FA++I++ M GH D
Sbjct: 1 MEGSDFVDPAFSSGERISASDLNSEHII----QAENHSFANRISMDMDVPDGHQ--LDSN 54
Query: 427 LLETEGRKVLDYEGPE 474
L ++VL+ GP+
Sbjct: 55 LTGFRWKRVLNPTGPQ 70
>AE014135-72|AAN06529.1| 1500|Drosophila melanogaster CG1710-PB,
isoform B protein.
Length = 1500
Score = 27.9 bits (59), Expect = 9.2
Identities = 22/76 (28%), Positives = 37/76 (48%), Gaps = 3/76 (3%)
Frame = +1
Query: 256 LAGSDQIKFGYVSRSQVRD---NSRHVILGTQQFKPHEFASQINLSMGPSVGHPALFDRL 426
+ GSD + + S ++ NS H+I Q + H FA++I++ M GH D
Sbjct: 1 MEGSDFVDPAFSSGERISASDLNSEHII----QAENHSFANRISMDMDVPDGHQ--LDSN 54
Query: 427 LLETEGRKVLDYEGPE 474
L ++VL+ GP+
Sbjct: 55 LTGFRWKRVLNPTGPQ 70
>AE014135-71|AAF59349.2| 1500|Drosophila melanogaster CG1710-PA,
isoform A protein.
Length = 1500
Score = 27.9 bits (59), Expect = 9.2
Identities = 22/76 (28%), Positives = 37/76 (48%), Gaps = 3/76 (3%)
Frame = +1
Query: 256 LAGSDQIKFGYVSRSQVRD---NSRHVILGTQQFKPHEFASQINLSMGPSVGHPALFDRL 426
+ GSD + + S ++ NS H+I Q + H FA++I++ M GH D
Sbjct: 1 MEGSDFVDPAFSSGERISASDLNSEHII----QAENHSFANRISMDMDVPDGHQ--LDSN 54
Query: 427 LLETEGRKVLDYEGPE 474
L ++VL+ GP+
Sbjct: 55 LTGFRWKRVLNPTGPQ 70
>AE014134-1779|AAF52873.2| 694|Drosophila melanogaster CG4901-PA
protein.
Length = 694
Score = 27.9 bits (59), Expect = 9.2
Identities = 15/57 (26%), Positives = 26/57 (45%)
Frame = -1
Query: 336 AEYHVTRVVAHLRPRHVAELYLIRSSQ*SLNGPLGELAGVVPQLVGQHGAALRVQFL 166
A Y ++ +PR VA + + R LNG +G+ G + A +++FL
Sbjct: 108 AGYAKNGMIGITQPRRVAAITVARRVAQELNGTIGDTVGYTVRFEDVTSRATKIRFL 164
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,507,372
Number of Sequences: 53049
Number of extensions: 386487
Number of successful extensions: 1294
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 1242
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1293
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 2012211456
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -