Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0013_J09
         (370 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF080566-1|AAC31946.1|  308|Anopheles gambiae abdominal-A homeot...    26   0.52 
AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific tran...    23   2.8  
AF230521-1|AAF36974.2|  185|Anopheles gambiae homeobox transcrip...    23   4.8  
AY500851-1|AAS77205.1|  605|Anopheles gambiae G-protein coupled ...    22   6.4  
AF269155-1|AAF91400.1|   59|Anopheles gambiae transcription fact...    22   6.4  
AF080565-1|AAC31945.1|  324|Anopheles gambiae Antennapedia homeo...    22   8.4  
AF080564-1|AAC31944.1|  372|Anopheles gambiae Sex combs reduced ...    22   8.4  

>AF080566-1|AAC31946.1|  308|Anopheles gambiae abdominal-A homeotic
           protein protein.
          Length = 308

 Score = 25.8 bits (54), Expect = 0.52
 Identities = 23/77 (29%), Positives = 34/77 (44%), Gaps = 3/77 (3%)
 Frame = -3

Query: 347 GRNVCAVRR*R---SRHYSLQRENACHFTYKSTNHKRNEIAVDKLRSPSDNISQFM*CEN 177
           G N C  RR R   +R  +L+ E   HF +  T  +R EIA   L      I  +     
Sbjct: 132 GPNGCPRRRGRQTYTRFQTLELEKEFHFNHYLTRRRRIEIA-HALCLTERQIKIWFQNRR 190

Query: 176 IHLRKQLYVVVNITNRS 126
           + L+K+L  V  I  ++
Sbjct: 191 MKLKKELRAVKEINEQA 207


>AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific
           transcription factor FRU-MB protein.
          Length = 759

 Score = 23.4 bits (48), Expect = 2.8
 Identities = 11/21 (52%), Positives = 11/21 (52%), Gaps = 1/21 (4%)
 Frame = +2

Query: 284 RFRAANCSAAIA-SDELRTHC 343
           RF    C A    SD LRTHC
Sbjct: 523 RFECPLCRATYTRSDNLRTHC 543


>AF230521-1|AAF36974.2|  185|Anopheles gambiae homeobox
           transcription factor protein.
          Length = 185

 Score = 22.6 bits (46), Expect = 4.8
 Identities = 10/27 (37%), Positives = 14/27 (51%)
 Frame = -3

Query: 314 SRHYSLQRENACHFTYKSTNHKRNEIA 234
           SRH +++ E   HF       +R EIA
Sbjct: 14  SRHQTIELEKEFHFNRYLNRRRRIEIA 40


>AY500851-1|AAS77205.1|  605|Anopheles gambiae G-protein coupled
           receptor 3 protein.
          Length = 605

 Score = 22.2 bits (45), Expect = 6.4
 Identities = 8/30 (26%), Positives = 18/30 (60%)
 Frame = -3

Query: 131 RSLLHNITLNSKTCFKQRRSAVFIISETEH 42
           R+L  ++T++ ++C +  R  +    +TEH
Sbjct: 571 RTLTTSLTVSRRSCLRPARVVIVERPKTEH 600


>AF269155-1|AAF91400.1|   59|Anopheles gambiae transcription factor
           Deformed protein.
          Length = 59

 Score = 22.2 bits (45), Expect = 6.4
 Identities = 10/27 (37%), Positives = 14/27 (51%)
 Frame = -3

Query: 314 SRHYSLQRENACHFTYKSTNHKRNEIA 234
           +RH  L+ E   H+    T  +R EIA
Sbjct: 9   TRHQILELEKEFHYNXYLTRRRRIEIA 35


>AF080565-1|AAC31945.1|  324|Anopheles gambiae Antennapedia homeotic
           protein protein.
          Length = 324

 Score = 21.8 bits (44), Expect = 8.4
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = -3

Query: 314 SRHYSLQRENACHFTYKSTNHKRNEIA 234
           +R+ +L+ E   HF    T  +R EIA
Sbjct: 252 TRYQTLELEKEFHFNRYLTRRRRIEIA 278


>AF080564-1|AAC31944.1|  372|Anopheles gambiae Sex combs reduced
           homeotic protein protein.
          Length = 372

 Score = 21.8 bits (44), Expect = 8.4
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = -3

Query: 314 SRHYSLQRENACHFTYKSTNHKRNEIA 234
           +R+ +L+ E   HF    T  +R EIA
Sbjct: 288 TRYQTLELEKEFHFNRYLTRRRRIEIA 314


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 365,033
Number of Sequences: 2352
Number of extensions: 7217
Number of successful extensions: 9
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 563,979
effective HSP length: 57
effective length of database: 429,915
effective search space used: 27944475
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)