Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0013_J03
(624 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X82782-1|CAA58023.1| 271|Drosophila melanogaster ribosomal prot... 208 5e-54
AY089570-1|AAL90308.1| 271|Drosophila melanogaster RE05022p pro... 208 5e-54
AE014298-903|AAF46169.1| 271|Drosophila melanogaster CG3314-PD,... 208 5e-54
AE014298-902|AAN09172.1| 271|Drosophila melanogaster CG3314-PC,... 208 5e-54
AE014298-901|AAN09170.1| 271|Drosophila melanogaster CG3314-PA,... 208 5e-54
AF208396-1|AAF20209.1| 127|Drosophila melanogaster Hoi-polloi p... 42 7e-04
AE014134-1677|AAF52798.2| 127|Drosophila melanogaster CG3949-PA... 42 7e-04
M89628-1|AAB00734.1| 661|Drosophila melanogaster retinal degene... 32 0.55
BT015959-1|AAV36844.1| 603|Drosophila melanogaster RH46370p pro... 32 0.55
AE014296-3312|AAF49044.2| 603|Drosophila melanogaster CG6571-PA... 32 0.55
AE014296-3311|AAO41219.1| 661|Drosophila melanogaster CG6571-PD... 32 0.55
AE014296-3310|AAO41218.1| 661|Drosophila melanogaster CG6571-PC... 32 0.55
AE014296-3309|AAO41217.1| 661|Drosophila melanogaster CG6571-PB... 32 0.55
BT023752-1|AAZ41760.1| 160|Drosophila melanogaster RH66170p pro... 28 8.9
AF217228-1|AAF27630.1| 160|Drosophila melanogaster nucleolar pr... 28 8.9
AE014296-2434|AAF49701.1| 160|Drosophila melanogaster CG5258-PA... 28 8.9
>X82782-1|CAA58023.1| 271|Drosophila melanogaster ribosomal protein
L7a protein.
Length = 271
Score = 208 bits (508), Expect = 5e-54
Identities = 100/143 (69%), Positives = 114/143 (79%)
Frame = +1
Query: 181 LFEKRTKNFAIGQDIQPTRDLSRFVRWPKYIRIQRQKAVLQRRLKVPPPINQFTQTLDKT 360
LFEKR KNF IGQ++QP RDLSRFVRWPKYIR+QRQKAVLQ+RLKVPPPI+QF+QTLDKT
Sbjct: 36 LFEKRPKNFGIGQNVQPKRDLSRFVRWPKYIRVQRQKAVLQKRLKVPPPIHQFSQTLDKT 95
Query: 361 TAKGLFKILEKYRPETXXXXXXXXXXXXXXXXXXXDEPPPKRPNTLRAGTNTVTKLVEKK 540
TA LFK+LEKYRPE+ D P K+P+ + AGTNTVTKL+E+K
Sbjct: 96 TAVKLFKLLEKYRPESALAKNVRLKKIAEAKAKGKDVEPKKKPSYVSAGTNTVTKLIEQK 155
Query: 541 KAQLVVIAHDVDPIELVLFLPAL 609
KAQLVVIAHDVDP+ELVLFLPAL
Sbjct: 156 KAQLVVIAHDVDPLELVLFLPAL 178
>AY089570-1|AAL90308.1| 271|Drosophila melanogaster RE05022p
protein.
Length = 271
Score = 208 bits (508), Expect = 5e-54
Identities = 100/143 (69%), Positives = 114/143 (79%)
Frame = +1
Query: 181 LFEKRTKNFAIGQDIQPTRDLSRFVRWPKYIRIQRQKAVLQRRLKVPPPINQFTQTLDKT 360
LFEKR KNF IGQ++QP RDLSRFVRWPKYIR+QRQKAVLQ+RLKVPPPI+QF+QTLDKT
Sbjct: 36 LFEKRPKNFGIGQNVQPKRDLSRFVRWPKYIRVQRQKAVLQKRLKVPPPIHQFSQTLDKT 95
Query: 361 TAKGLFKILEKYRPETXXXXXXXXXXXXXXXXXXXDEPPPKRPNTLRAGTNTVTKLVEKK 540
TA LFK+LEKYRPE+ D P K+P+ + AGTNTVTKL+E+K
Sbjct: 96 TAVKLFKLLEKYRPESPLAKKLRLKKIAEAKAKGKDVEPKKKPSYVSAGTNTVTKLIEQK 155
Query: 541 KAQLVVIAHDVDPIELVLFLPAL 609
KAQLVVIAHDVDP+ELVLFLPAL
Sbjct: 156 KAQLVVIAHDVDPLELVLFLPAL 178
>AE014298-903|AAF46169.1| 271|Drosophila melanogaster CG3314-PD,
isoform D protein.
Length = 271
Score = 208 bits (508), Expect = 5e-54
Identities = 100/143 (69%), Positives = 114/143 (79%)
Frame = +1
Query: 181 LFEKRTKNFAIGQDIQPTRDLSRFVRWPKYIRIQRQKAVLQRRLKVPPPINQFTQTLDKT 360
LFEKR KNF IGQ++QP RDLSRFVRWPKYIR+QRQKAVLQ+RLKVPPPI+QF+QTLDKT
Sbjct: 36 LFEKRPKNFGIGQNVQPKRDLSRFVRWPKYIRVQRQKAVLQKRLKVPPPIHQFSQTLDKT 95
Query: 361 TAKGLFKILEKYRPETXXXXXXXXXXXXXXXXXXXDEPPPKRPNTLRAGTNTVTKLVEKK 540
TA LFK+LEKYRPE+ D P K+P+ + AGTNTVTKL+E+K
Sbjct: 96 TAVKLFKLLEKYRPESPLAKKLRLKKIAEAKAKGKDVEPKKKPSYVSAGTNTVTKLIEQK 155
Query: 541 KAQLVVIAHDVDPIELVLFLPAL 609
KAQLVVIAHDVDP+ELVLFLPAL
Sbjct: 156 KAQLVVIAHDVDPLELVLFLPAL 178
>AE014298-902|AAN09172.1| 271|Drosophila melanogaster CG3314-PC,
isoform C protein.
Length = 271
Score = 208 bits (508), Expect = 5e-54
Identities = 100/143 (69%), Positives = 114/143 (79%)
Frame = +1
Query: 181 LFEKRTKNFAIGQDIQPTRDLSRFVRWPKYIRIQRQKAVLQRRLKVPPPINQFTQTLDKT 360
LFEKR KNF IGQ++QP RDLSRFVRWPKYIR+QRQKAVLQ+RLKVPPPI+QF+QTLDKT
Sbjct: 36 LFEKRPKNFGIGQNVQPKRDLSRFVRWPKYIRVQRQKAVLQKRLKVPPPIHQFSQTLDKT 95
Query: 361 TAKGLFKILEKYRPETXXXXXXXXXXXXXXXXXXXDEPPPKRPNTLRAGTNTVTKLVEKK 540
TA LFK+LEKYRPE+ D P K+P+ + AGTNTVTKL+E+K
Sbjct: 96 TAVKLFKLLEKYRPESPLAKKLRLKKIAEAKAKGKDVEPKKKPSYVSAGTNTVTKLIEQK 155
Query: 541 KAQLVVIAHDVDPIELVLFLPAL 609
KAQLVVIAHDVDP+ELVLFLPAL
Sbjct: 156 KAQLVVIAHDVDPLELVLFLPAL 178
>AE014298-901|AAN09170.1| 271|Drosophila melanogaster CG3314-PA,
isoform A protein.
Length = 271
Score = 208 bits (508), Expect = 5e-54
Identities = 100/143 (69%), Positives = 114/143 (79%)
Frame = +1
Query: 181 LFEKRTKNFAIGQDIQPTRDLSRFVRWPKYIRIQRQKAVLQRRLKVPPPINQFTQTLDKT 360
LFEKR KNF IGQ++QP RDLSRFVRWPKYIR+QRQKAVLQ+RLKVPPPI+QF+QTLDKT
Sbjct: 36 LFEKRPKNFGIGQNVQPKRDLSRFVRWPKYIRVQRQKAVLQKRLKVPPPIHQFSQTLDKT 95
Query: 361 TAKGLFKILEKYRPETXXXXXXXXXXXXXXXXXXXDEPPPKRPNTLRAGTNTVTKLVEKK 540
TA LFK+LEKYRPE+ D P K+P+ + AGTNTVTKL+E+K
Sbjct: 96 TAVKLFKLLEKYRPESPLAKKLRLKKIAEAKAKGKDVEPKKKPSYVSAGTNTVTKLIEQK 155
Query: 541 KAQLVVIAHDVDPIELVLFLPAL 609
KAQLVVIAHDVDP+ELVLFLPAL
Sbjct: 156 KAQLVVIAHDVDPLELVLFLPAL 178
>AF208396-1|AAF20209.1| 127|Drosophila melanogaster Hoi-polloi
protein.
Length = 127
Score = 41.9 bits (94), Expect = 7e-04
Identities = 19/40 (47%), Positives = 26/40 (65%)
Frame = +1
Query: 490 NTLRAGTNTVTKLVEKKKAQLVVIAHDVDPIELVLFLPAL 609
N LR G N TK + + A +VV+A D +PIE++L LP L
Sbjct: 32 NQLRKGANEATKTLNRGLADIVVLAGDAEPIEILLHLPLL 71
>AE014134-1677|AAF52798.2| 127|Drosophila melanogaster CG3949-PA
protein.
Length = 127
Score = 41.9 bits (94), Expect = 7e-04
Identities = 19/40 (47%), Positives = 26/40 (65%)
Frame = +1
Query: 490 NTLRAGTNTVTKLVEKKKAQLVVIAHDVDPIELVLFLPAL 609
N LR G N TK + + A +VV+A D +PIE++L LP L
Sbjct: 32 NQLRKGANEATKTLNRGLADIVVLAGDAEPIEILLHLPLL 71
>M89628-1|AAB00734.1| 661|Drosophila melanogaster retinal
degeneration C protein protein.
Length = 661
Score = 32.3 bits (70), Expect = 0.55
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = +1
Query: 484 RPNTLRAGTNTVTKLVEKKKAQLVVIAHDVDPIE 585
RP+ + T+ VT L +K +V+ HD+DP +
Sbjct: 617 RPSVAKTATDPVTLLADKISKNTLVVEHDIDPTD 650
>BT015959-1|AAV36844.1| 603|Drosophila melanogaster RH46370p
protein.
Length = 603
Score = 32.3 bits (70), Expect = 0.55
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = +1
Query: 484 RPNTLRAGTNTVTKLVEKKKAQLVVIAHDVDPIE 585
RP+ + T+ VT L +K +V+ HD+DP +
Sbjct: 559 RPSVAKTATDPVTLLADKISKNTLVVEHDIDPTD 592
>AE014296-3312|AAF49044.2| 603|Drosophila melanogaster CG6571-PA,
isoform A protein.
Length = 603
Score = 32.3 bits (70), Expect = 0.55
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = +1
Query: 484 RPNTLRAGTNTVTKLVEKKKAQLVVIAHDVDPIE 585
RP+ + T+ VT L +K +V+ HD+DP +
Sbjct: 559 RPSVAKTATDPVTLLADKISKNTLVVEHDIDPTD 592
>AE014296-3311|AAO41219.1| 661|Drosophila melanogaster CG6571-PD,
isoform D protein.
Length = 661
Score = 32.3 bits (70), Expect = 0.55
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = +1
Query: 484 RPNTLRAGTNTVTKLVEKKKAQLVVIAHDVDPIE 585
RP+ + T+ VT L +K +V+ HD+DP +
Sbjct: 617 RPSVAKTATDPVTLLADKISKNTLVVEHDIDPTD 650
>AE014296-3310|AAO41218.1| 661|Drosophila melanogaster CG6571-PC,
isoform C protein.
Length = 661
Score = 32.3 bits (70), Expect = 0.55
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = +1
Query: 484 RPNTLRAGTNTVTKLVEKKKAQLVVIAHDVDPIE 585
RP+ + T+ VT L +K +V+ HD+DP +
Sbjct: 617 RPSVAKTATDPVTLLADKISKNTLVVEHDIDPTD 650
>AE014296-3309|AAO41217.1| 661|Drosophila melanogaster CG6571-PB,
isoform B protein.
Length = 661
Score = 32.3 bits (70), Expect = 0.55
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = +1
Query: 484 RPNTLRAGTNTVTKLVEKKKAQLVVIAHDVDPIE 585
RP+ + T+ VT L +K +V+ HD+DP +
Sbjct: 617 RPSVAKTATDPVTLLADKISKNTLVVEHDIDPTD 650
>BT023752-1|AAZ41760.1| 160|Drosophila melanogaster RH66170p
protein.
Length = 160
Score = 28.3 bits (60), Expect = 8.9
Identities = 13/43 (30%), Positives = 22/43 (51%)
Frame = +1
Query: 481 KRPNTLRAGTNTVTKLVEKKKAQLVVIAHDVDPIELVLFLPAL 609
K LR G V + K + + + A DV P++++ LPA+
Sbjct: 62 KHKTFLRNGLKDVQTRLRKGETGICIFAGDVTPVDIMCHLPAV 104
>AF217228-1|AAF27630.1| 160|Drosophila melanogaster nucleolar
protein NHP2 protein.
Length = 160
Score = 28.3 bits (60), Expect = 8.9
Identities = 13/43 (30%), Positives = 22/43 (51%)
Frame = +1
Query: 481 KRPNTLRAGTNTVTKLVEKKKAQLVVIAHDVDPIELVLFLPAL 609
K LR G V + K + + + A DV P++++ LPA+
Sbjct: 62 KHKTFLRNGLKDVQTRLRKGETGICIFAGDVTPVDIMCHLPAV 104
>AE014296-2434|AAF49701.1| 160|Drosophila melanogaster CG5258-PA
protein.
Length = 160
Score = 28.3 bits (60), Expect = 8.9
Identities = 13/43 (30%), Positives = 22/43 (51%)
Frame = +1
Query: 481 KRPNTLRAGTNTVTKLVEKKKAQLVVIAHDVDPIELVLFLPAL 609
K LR G V + K + + + A DV P++++ LPA+
Sbjct: 62 KHKTFLRNGLKDVQTRLRKGETGICIFAGDVTPVDIMCHLPAV 104
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,516,040
Number of Sequences: 53049
Number of extensions: 473262
Number of successful extensions: 1149
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1107
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1140
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2579793750
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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