Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0013_J02
(518 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z70205-2|CAA94116.1| 529|Caenorhabditis elegans Hypothetical pr... 52 3e-07
U40945-6|AAS80346.1| 437|Caenorhabditis elegans Hypothetical pr... 48 5e-06
U40945-5|AAS80344.1| 617|Caenorhabditis elegans Hypothetical pr... 48 5e-06
Z81505-1|CAB04122.1| 673|Caenorhabditis elegans Hypothetical pr... 46 2e-05
Z77655-7|CAB01133.2| 221|Caenorhabditis elegans Hypothetical pr... 44 7e-05
X89223-1|CAA61507.1| 582|Caenorhabditis elegans sli-1 protein. 42 2e-04
U58730-5|AAK84546.1| 582|Caenorhabditis elegans Suppressor of l... 42 2e-04
U58730-4|AAK84547.1| 565|Caenorhabditis elegans Suppressor of l... 42 2e-04
U58730-3|AAT92069.1| 523|Caenorhabditis elegans Suppressor of l... 42 2e-04
AL117202-18|CAB57896.3| 765|Caenorhabditis elegans Hypothetical... 42 3e-04
AF039047-10|AAB94229.2| 400|Caenorhabditis elegans Hypothetical... 40 0.001
Z22177-12|CAA80152.1| 974|Caenorhabditis elegans Hypothetical p... 36 0.017
Z19155-5|CAA79562.1| 974|Caenorhabditis elegans Hypothetical pr... 36 0.017
Z70208-5|CAA94134.1| 201|Caenorhabditis elegans Hypothetical pr... 34 0.070
Z19156-1|CAA79563.1| 160|Caenorhabditis elegans Hypothetical pr... 33 0.12
U40421-3|AAA81439.2| 347|Caenorhabditis elegans Hypothetical pr... 32 0.21
Z46787-7|CAA86745.1| 235|Caenorhabditis elegans Hypothetical pr... 31 0.37
U80442-6|AAB37669.1| 294|Caenorhabditis elegans Hypothetical pr... 31 0.49
AL132876-38|CAD21663.2| 224|Caenorhabditis elegans Hypothetical... 31 0.65
Z66495-6|CAA91275.2| 547|Caenorhabditis elegans Hypothetical pr... 30 0.86
AL032627-14|CAA21549.1| 386|Caenorhabditis elegans Hypothetical... 30 0.86
Z68303-8|CAA92640.2| 273|Caenorhabditis elegans Hypothetical pr... 30 1.1
L07144-6|AAK21443.1| 834|Caenorhabditis elegans Temporarily ass... 30 1.1
L07144-5|AAU20841.1| 837|Caenorhabditis elegans Temporarily ass... 30 1.1
Z70213-2|CAA94171.1| 304|Caenorhabditis elegans Hypothetical pr... 29 2.0
Z93384-1|CAB07633.3| 342|Caenorhabditis elegans Hypothetical pr... 29 2.6
Z82062-2|CAB04890.1| 489|Caenorhabditis elegans Hypothetical pr... 28 4.6
Z74035-3|CAA98481.1| 808|Caenorhabditis elegans Hypothetical pr... 27 6.1
U29535-19|AAK31449.2| 252|Caenorhabditis elegans Hypothetical p... 27 8.0
AL032639-3|CAA21635.1| 283|Caenorhabditis elegans Hypothetical ... 27 8.0
>Z70205-2|CAA94116.1| 529|Caenorhabditis elegans Hypothetical
protein C11H1.3 protein.
Length = 529
Score = 51.6 bits (118), Expect = 3e-07
Identities = 15/40 (37%), Positives = 29/40 (72%), Gaps = 3/40 (7%)
Frame = +3
Query: 168 CVVCTDNPKEIILLPCGHVCLCEDCSDNIT---GNCPVCR 278
C++C + ++ ++LPC H+C+C +C+D++ NCP+CR
Sbjct: 269 CIICLSDIRDTVILPCRHLCVCSNCADSLRYKHNNCPICR 308
>U40945-6|AAS80346.1| 437|Caenorhabditis elegans Hypothetical
protein F10D7.5c protein.
Length = 437
Score = 47.6 bits (108), Expect = 5e-06
Identities = 16/43 (37%), Positives = 24/43 (55%), Gaps = 3/43 (6%)
Frame = +3
Query: 168 CVVCTDNPKEIILLPCGHVCLCEDCSDNI---TGNCPVCREKI 287
C +C D P +L CGH+C+C +C + G CP+CR +
Sbjct: 386 CTICMDAPVNSVLYTCGHMCMCFECGRRLLTTKGTCPICRAPV 428
>U40945-5|AAS80344.1| 617|Caenorhabditis elegans Hypothetical
protein F10D7.5a protein.
Length = 617
Score = 47.6 bits (108), Expect = 5e-06
Identities = 16/43 (37%), Positives = 24/43 (55%), Gaps = 3/43 (6%)
Frame = +3
Query: 168 CVVCTDNPKEIILLPCGHVCLCEDCSDNI---TGNCPVCREKI 287
C +C D P +L CGH+C+C +C + G CP+CR +
Sbjct: 566 CTICMDAPVNSVLYTCGHMCMCFECGRRLLTTKGTCPICRAPV 608
>Z81505-1|CAB04122.1| 673|Caenorhabditis elegans Hypothetical
protein F16A11.1 protein.
Length = 673
Score = 46.0 bits (104), Expect = 2e-05
Identities = 18/43 (41%), Positives = 24/43 (55%)
Frame = +3
Query: 168 CVVCTDNPKEIILLPCGHVCLCEDCSDNITGNCPVCREKIDSR 296
C +C P LLPC H C DC N+ +CP+CR+ I+ R
Sbjct: 564 CTICFAAPGSTTLLPCNHDGFCSDCC-NMMDHCPLCRKPIEER 605
>Z77655-7|CAB01133.2| 221|Caenorhabditis elegans Hypothetical
protein C56A3.4 protein.
Length = 221
Score = 44.0 bits (99), Expect = 7e-05
Identities = 16/46 (34%), Positives = 23/46 (50%), Gaps = 4/46 (8%)
Frame = +3
Query: 168 CVVCTDNPKEIILLPCGHVCLCEDCSDNITGN----CPVCREKIDS 293
C +C K ++L PC H+C CE C+D CP+C + S
Sbjct: 170 CFLCKLTEKRVLLRPCNHLCFCEPCNDTFQKQIPLLCPICHMHVQS 215
>X89223-1|CAA61507.1| 582|Caenorhabditis elegans sli-1 protein.
Length = 582
Score = 42.3 bits (95), Expect = 2e-04
Identities = 21/48 (43%), Positives = 26/48 (54%), Gaps = 6/48 (12%)
Frame = +3
Query: 162 QLCVVCTDNPKEIILLPCGHVCLCEDC------SDNITGNCPVCREKI 287
+LC +C DN K I + PCGH+ LC C SD CP CR +I
Sbjct: 388 ELCKICDDNEKNIKIEPCGHL-LCAKCLANWQDSDGGGNTCPFCRYEI 434
>U58730-5|AAK84546.1| 582|Caenorhabditis elegans Suppressor of
lineage defect protein1, isoform a protein.
Length = 582
Score = 42.3 bits (95), Expect = 2e-04
Identities = 21/48 (43%), Positives = 26/48 (54%), Gaps = 6/48 (12%)
Frame = +3
Query: 162 QLCVVCTDNPKEIILLPCGHVCLCEDC------SDNITGNCPVCREKI 287
+LC +C DN K I + PCGH+ LC C SD CP CR +I
Sbjct: 388 ELCKICDDNEKNIKIEPCGHL-LCAKCLANWQDSDGGGNTCPFCRYEI 434
>U58730-4|AAK84547.1| 565|Caenorhabditis elegans Suppressor of
lineage defect protein1, isoform b protein.
Length = 565
Score = 42.3 bits (95), Expect = 2e-04
Identities = 21/48 (43%), Positives = 26/48 (54%), Gaps = 6/48 (12%)
Frame = +3
Query: 162 QLCVVCTDNPKEIILLPCGHVCLCEDC------SDNITGNCPVCREKI 287
+LC +C DN K I + PCGH+ LC C SD CP CR +I
Sbjct: 371 ELCKICDDNEKNIKIEPCGHL-LCAKCLANWQDSDGGGNTCPFCRYEI 417
>U58730-3|AAT92069.1| 523|Caenorhabditis elegans Suppressor of
lineage defect protein1, isoform c protein.
Length = 523
Score = 42.3 bits (95), Expect = 2e-04
Identities = 21/48 (43%), Positives = 26/48 (54%), Gaps = 6/48 (12%)
Frame = +3
Query: 162 QLCVVCTDNPKEIILLPCGHVCLCEDC------SDNITGNCPVCREKI 287
+LC +C DN K I + PCGH+ LC C SD CP CR +I
Sbjct: 371 ELCKICDDNEKNIKIEPCGHL-LCAKCLANWQDSDGGGNTCPFCRYEI 417
>AL117202-18|CAB57896.3| 765|Caenorhabditis elegans Hypothetical
protein Y47D3A.22 protein.
Length = 765
Score = 41.5 bits (93), Expect = 3e-04
Identities = 16/47 (34%), Positives = 26/47 (55%)
Frame = +3
Query: 168 CVVCTDNPKEIILLPCGHVCLCEDCSDNITGNCPVCREKIDSRAPAF 308
C +C D K ++ CGH C DC+D + C +CR+ I++ P +
Sbjct: 720 CAICMDL-KIAVVFNCGHTA-CVDCADKLKKQCHICRKTIETMQPIY 764
Score = 38.3 bits (85), Expect = 0.003
Identities = 16/47 (34%), Positives = 27/47 (57%), Gaps = 2/47 (4%)
Frame = +3
Query: 156 DLQLCVV-CTDNPKEIILLPCGHVCLCEDCSDNIT-GNCPVCREKID 290
++ +C C ++ + L PCGH C DC++ + CPVCR+ I+
Sbjct: 603 EVTMCTFSCLNSVATVKLDPCGHRVACVDCTEKVAIRRCPVCRQFIN 649
>AF039047-10|AAB94229.2| 400|Caenorhabditis elegans Hypothetical
protein K11D12.9 protein.
Length = 400
Score = 39.9 bits (89), Expect = 0.001
Identities = 15/49 (30%), Positives = 23/49 (46%), Gaps = 1/49 (2%)
Frame = +3
Query: 168 CVVCTDNPKEIILLPCGHVCLCEDCSD-NITGNCPVCREKIDSRAPAFI 311
C +C I+ +PC H+ C C D + CP CR I++ F+
Sbjct: 352 CCICLATKPSIVFMPCRHLITCSGCYDASDFRECPTCRSTIENSITVFM 400
>Z22177-12|CAA80152.1| 974|Caenorhabditis elegans Hypothetical
protein F54G8.4 protein.
Length = 974
Score = 35.9 bits (79), Expect = 0.017
Identities = 20/49 (40%), Positives = 25/49 (51%), Gaps = 6/49 (12%)
Frame = +3
Query: 150 LPDLQLCVVCTDNPKEIILLPCGHV----CLCEDCSDNITGN--CPVCR 278
+ L C +C D K+ LLPC H CL E C+D + N CP CR
Sbjct: 37 IEQLLTCPICLDRYKQPKLLPCQHTFCYPCL-ESCADTLHRNLKCPECR 84
>Z19155-5|CAA79562.1| 974|Caenorhabditis elegans Hypothetical
protein F54G8.4 protein.
Length = 974
Score = 35.9 bits (79), Expect = 0.017
Identities = 20/49 (40%), Positives = 25/49 (51%), Gaps = 6/49 (12%)
Frame = +3
Query: 150 LPDLQLCVVCTDNPKEIILLPCGHV----CLCEDCSDNITGN--CPVCR 278
+ L C +C D K+ LLPC H CL E C+D + N CP CR
Sbjct: 37 IEQLLTCPICLDRYKQPKLLPCQHTFCYPCL-ESCADTLHRNLKCPECR 84
>Z70208-5|CAA94134.1| 201|Caenorhabditis elegans Hypothetical
protein F54B11.5 protein.
Length = 201
Score = 33.9 bits (74), Expect = 0.070
Identities = 15/44 (34%), Positives = 24/44 (54%), Gaps = 4/44 (9%)
Frame = +3
Query: 168 CVVCTDNPKEIILLPCGHV----CLCEDCSDNITGNCPVCREKI 287
CV+C +N ++ LLPC H C+ + +CP+C+ KI
Sbjct: 129 CVICMENINDL-LLPCLHAFCIRCIANEMEYRHDFSCPICKTKI 171
>Z19156-1|CAA79563.1| 160|Caenorhabditis elegans Hypothetical
protein T02C1.1 protein.
Length = 160
Score = 33.1 bits (72), Expect = 0.12
Identities = 16/39 (41%), Positives = 20/39 (51%), Gaps = 2/39 (5%)
Frame = +3
Query: 168 CVVCTDNPKEIILLPCGH-VC-LCEDCSDNITGNCPVCR 278
C VC D E ++ CGH C C + NI CP+CR
Sbjct: 8 CAVCLDFFVEPCIIECGHSYCRFCIESHLNINEKCPLCR 46
>U40421-3|AAA81439.2| 347|Caenorhabditis elegans Hypothetical
protein C02B8.6 protein.
Length = 347
Score = 32.3 bits (70), Expect = 0.21
Identities = 14/47 (29%), Positives = 23/47 (48%), Gaps = 4/47 (8%)
Frame = +3
Query: 165 LCVVCTDNPKEIILLPCGH----VCLCEDCSDNITGNCPVCREKIDS 293
+C +C + P + L C H +C+ +++ NC VCR DS
Sbjct: 4 ICTICHNTPNRPVRLDCNHEFCYICIKGSIQNDML-NCAVCRRPFDS 49
>Z46787-7|CAA86745.1| 235|Caenorhabditis elegans Hypothetical
protein C16C10.7 protein.
Length = 235
Score = 31.5 bits (68), Expect = 0.37
Identities = 17/47 (36%), Positives = 23/47 (48%), Gaps = 6/47 (12%)
Frame = +3
Query: 168 CVVCTDNPKEIILLPCGHVCLCEDC----SDNITGN--CPVCREKID 290
C +C D K+ ++ CGH+ C C D N CPVC+ ID
Sbjct: 26 CNICLDAAKDAVVSLCGHL-FCWPCLSQWLDTRPNNQVCPVCKSAID 71
>U80442-6|AAB37669.1| 294|Caenorhabditis elegans Hypothetical
protein T20F5.7 protein.
Length = 294
Score = 31.1 bits (67), Expect = 0.49
Identities = 17/54 (31%), Positives = 27/54 (50%), Gaps = 12/54 (22%)
Frame = +3
Query: 156 DLQLCVVCT----DNPKEIILLPCGHVCLCEDCSDNITG--------NCPVCRE 281
DL C++C ++ +L CGH +CE+C+DN+ CP CR+
Sbjct: 11 DLVTCLICIREFDTKTRKPKVLHCGHT-VCEECTDNLRDFNAPLLVVRCPTCRQ 63
>AL132876-38|CAD21663.2| 224|Caenorhabditis elegans Hypothetical
protein Y105E8A.14 protein.
Length = 224
Score = 30.7 bits (66), Expect = 0.65
Identities = 18/48 (37%), Positives = 25/48 (52%), Gaps = 5/48 (10%)
Frame = +3
Query: 168 CVVCTDNPKEIILLP-CGH----VCLCEDCSDNITGNCPVCREKIDSR 296
C VC +P CGH +CL + S + G+CP+CR IDS+
Sbjct: 24 CAVCYSEMILPTTIPSCGHKFCFICL-KGVSVSNNGDCPICRGPIDSQ 70
>Z66495-6|CAA91275.2| 547|Caenorhabditis elegans Hypothetical
protein C36A4.8 protein.
Length = 547
Score = 30.3 bits (65), Expect = 0.86
Identities = 15/49 (30%), Positives = 22/49 (44%), Gaps = 5/49 (10%)
Frame = +3
Query: 168 CVVCTDNPKEIILLPCGHVCLCEDCSDNITGN-----CPVCREKIDSRA 299
C +C K+ IL C H+ C C + CP+CR +D R+
Sbjct: 21 CGICCSTYKDPILSTCFHI-FCRSCINACFERKRKVQCPICRSVLDKRS 68
>AL032627-14|CAA21549.1| 386|Caenorhabditis elegans Hypothetical
protein Y41C4A.11 protein.
Length = 386
Score = 30.3 bits (65), Expect = 0.86
Identities = 14/40 (35%), Positives = 23/40 (57%), Gaps = 3/40 (7%)
Frame = +3
Query: 222 VCLCEDCSDNITGNCPVCREKI---DSRAPAFIT*SSRLR 332
+CLC D S ++ NCP C + + AP F++ S R++
Sbjct: 72 ICLCFDVSKDVDHNCPNCGLLLATSNRAAPNFVSHSDRVK 111
>Z68303-8|CAA92640.2| 273|Caenorhabditis elegans Hypothetical
protein ZK809.7 protein.
Length = 273
Score = 29.9 bits (64), Expect = 1.1
Identities = 19/45 (42%), Positives = 24/45 (53%), Gaps = 4/45 (8%)
Frame = +3
Query: 168 CVVCTDNPKEIILL--PCGHVCL--CEDCSDNITGNCPVCREKID 290
CVVC D P I ++ CGHV C S N+T CP+C E +
Sbjct: 216 CVVC-DKPSVIPMVGQKCGHVACYTCIATSRNMT--CPLCSENAE 257
>L07144-6|AAK21443.1| 834|Caenorhabditis elegans Temporarily
assigned gene nameprotein 84, isoform a protein.
Length = 834
Score = 29.9 bits (64), Expect = 1.1
Identities = 15/40 (37%), Positives = 18/40 (45%), Gaps = 4/40 (10%)
Frame = +3
Query: 168 CVVCTDNPKEIILLPCGHVCLCEDC----SDNITGNCPVC 275
C C PK+ I+L C H+ CE C D CP C
Sbjct: 782 CPSCKTRPKDCIMLKCYHL-FCETCIKTMYDTRQRKCPKC 820
>L07144-5|AAU20841.1| 837|Caenorhabditis elegans Temporarily
assigned gene nameprotein 84, isoform b protein.
Length = 837
Score = 29.9 bits (64), Expect = 1.1
Identities = 15/40 (37%), Positives = 18/40 (45%), Gaps = 4/40 (10%)
Frame = +3
Query: 168 CVVCTDNPKEIILLPCGHVCLCEDC----SDNITGNCPVC 275
C C PK+ I+L C H+ CE C D CP C
Sbjct: 785 CPSCKTRPKDCIMLKCYHL-FCETCIKTMYDTRQRKCPKC 823
>Z70213-2|CAA94171.1| 304|Caenorhabditis elegans Hypothetical
protein ZK930.2 protein.
Length = 304
Score = 29.1 bits (62), Expect = 2.0
Identities = 13/28 (46%), Positives = 17/28 (60%), Gaps = 3/28 (10%)
Frame = +3
Query: 228 LCEDCSDNITGN---CPVCREKIDSRAP 302
+CE+C NI N CPVC+ K S+ P
Sbjct: 260 VCENCGANIHRNAPTCPVCKMKTRSKNP 287
>Z93384-1|CAB07633.3| 342|Caenorhabditis elegans Hypothetical
protein H08M01.1 protein.
Length = 342
Score = 28.7 bits (61), Expect = 2.6
Identities = 21/65 (32%), Positives = 29/65 (44%), Gaps = 12/65 (18%)
Frame = +3
Query: 153 PDLQLCVVCTDNPKEIILLP-CGHVCLCEDC-----------SDNITGNCPVCREKIDSR 296
P LQ CV+C + P + P C + C C ++ +CP+CR K DS
Sbjct: 270 PTLQDCVICMEEPVNPKVCPKCLKMIGCAKCFRWWTVFRCWWQSSLNPSCPLCRLKWDS- 328
Query: 297 APAFI 311
AP I
Sbjct: 329 APKVI 333
>Z82062-2|CAB04890.1| 489|Caenorhabditis elegans Hypothetical
protein W02A11.3 protein.
Length = 489
Score = 27.9 bits (59), Expect = 4.6
Identities = 18/50 (36%), Positives = 24/50 (48%), Gaps = 5/50 (10%)
Frame = +3
Query: 156 DLQLCVVCT---DNPKEIILLPCGHVCLCEDCSD--NITGNCPVCREKID 290
D C VC ++ + I L C HV E +I CP+CRE+ID
Sbjct: 429 DEDTCTVCLSSFEDGESIQKLRCNHVFHPECIYKWLDINKRCPMCREEID 478
>Z74035-3|CAA98481.1| 808|Caenorhabditis elegans Hypothetical
protein F47G9.4 protein.
Length = 808
Score = 27.5 bits (58), Expect = 6.1
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = +3
Query: 168 CVVCTDNPKEIILLPCGHVCLCEDCSDNITGNCPVC 275
C +C + +E ILL C H C CS + +C C
Sbjct: 8 CTICKNEFEEPILLSCQHT-TCRKCSTG-SPSCKSC 41
>U29535-19|AAK31449.2| 252|Caenorhabditis elegans Hypothetical
protein C25H3.1 protein.
Length = 252
Score = 27.1 bits (57), Expect = 8.0
Identities = 12/27 (44%), Positives = 19/27 (70%)
Frame = -1
Query: 419 KLIHCFSLRNYLFTIEVGYNGSTKFLI 339
K I+ FS ++ L ++G +GSTKF+I
Sbjct: 108 KAIYTFSSQHVLKVRDMGVHGSTKFII 134
>AL032639-3|CAA21635.1| 283|Caenorhabditis elegans Hypothetical
protein Y38F1A.2 protein.
Length = 283
Score = 27.1 bits (57), Expect = 8.0
Identities = 9/23 (39%), Positives = 12/23 (52%)
Frame = +3
Query: 168 CVVCTDNPKEIILLPCGHVCLCE 236
C +C N +L CGH+ CE
Sbjct: 105 CPICLANASFPVLTDCGHIFCCE 127
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,958,764
Number of Sequences: 27780
Number of extensions: 212596
Number of successful extensions: 489
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 468
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 484
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1007108110
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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