Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0013_J01
         (531 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L22959-1|AAA28870.1|  152|Drosophila melanogaster ribosomal prot...   169   2e-42
BT024929-1|ABE01159.1|  152|Drosophila melanogaster IP16603p pro...   169   2e-42
AE013599-2985|AAM68401.1|  152|Drosophila melanogaster CG8900-PB...   169   2e-42
AE013599-2984|AAF57491.1|  152|Drosophila melanogaster CG8900-PA...   169   2e-42
AY118434-1|AAM48463.1|  152|Drosophila melanogaster RH43343p pro...   166   1e-41
BT022499-1|AAY54915.1|  246|Drosophila melanogaster IP07925p pro...    93   3e-19
AY069818-1|AAL39963.1|  926|Drosophila melanogaster SD06626p pro...    28   9.1  
AY061500-1|AAL29048.1|  605|Drosophila melanogaster LD46023p pro...    28   9.1  
AE014296-3738|AAN12209.2|  926|Drosophila melanogaster CG10712-P...    28   9.1  
AE014296-3737|AAF51877.2|  926|Drosophila melanogaster CG10712-P...    28   9.1  
AE014296-3736|AAF51878.2|  926|Drosophila melanogaster CG10712-P...    28   9.1  
AE014134-1909|AAF52968.2|  605|Drosophila melanogaster CG7384-PA...    28   9.1  

>L22959-1|AAA28870.1|  152|Drosophila melanogaster ribosomal protein
           S18 protein.
          Length = 152

 Score =  169 bits (412), Expect = 2e-42
 Identities = 78/89 (87%), Positives = 85/89 (95%)
 Frame = +3

Query: 45  MSLVIPDKFQHILRIMNTNIDGKRKVMFAMTAIKGVGRRYSNIVLKKADIDLDKRAGECT 224
           MSLVIP+KFQHILRIMNTNIDGKRKV  AMTAIKGVGRRYSNIVLKKAD+DL KRAGECT
Sbjct: 1   MSLVIPEKFQHILRIMNTNIDGKRKVGIAMTAIKGVGRRYSNIVLKKADVDLTKRAGECT 60

Query: 225 EEEVEKIVTIMSNPRQYKIPDWFLNRQKD 311
           EEEV+K+VTI+SNP QYK+P+WFLNRQKD
Sbjct: 61  EEEVDKVVTIISNPLQYKVPNWFLNRQKD 89



 Score = 86.6 bits (205), Expect = 2e-17
 Identities = 40/58 (68%), Positives = 46/58 (79%)
 Frame = +1

Query: 265 PGNTKYQTGFSTDKRIIVDGKYSQLTSSNLDSKLREDLERLKKIRAHRGMRHYWGLRV 438
           P   K    F   ++ I+DGKY QLTSSNLDSKLR+DLERLKKIR+HRG+RHYWGLRV
Sbjct: 74  PLQYKVPNWFLNRQKDIIDGKYWQLTSSNLDSKLRDDLERLKKIRSHRGLRHYWGLRV 131


>BT024929-1|ABE01159.1|  152|Drosophila melanogaster IP16603p
           protein.
          Length = 152

 Score =  169 bits (412), Expect = 2e-42
 Identities = 78/89 (87%), Positives = 85/89 (95%)
 Frame = +3

Query: 45  MSLVIPDKFQHILRIMNTNIDGKRKVMFAMTAIKGVGRRYSNIVLKKADIDLDKRAGECT 224
           MSLVIP+KFQHILRIMNTNIDGKRKV  AMTAIKGVGRRYSNIVLKKAD+DL KRAGECT
Sbjct: 1   MSLVIPEKFQHILRIMNTNIDGKRKVGIAMTAIKGVGRRYSNIVLKKADVDLTKRAGECT 60

Query: 225 EEEVEKIVTIMSNPRQYKIPDWFLNRQKD 311
           EEEV+K+VTI+SNP QYK+P+WFLNRQKD
Sbjct: 61  EEEVDKVVTIISNPLQYKVPNWFLNRQKD 89



 Score = 86.6 bits (205), Expect = 2e-17
 Identities = 40/58 (68%), Positives = 46/58 (79%)
 Frame = +1

Query: 265 PGNTKYQTGFSTDKRIIVDGKYSQLTSSNLDSKLREDLERLKKIRAHRGMRHYWGLRV 438
           P   K    F   ++ I+DGKY QLTSSNLDSKLR+DLERLKKIR+HRG+RHYWGLRV
Sbjct: 74  PLQYKVPNWFLNRQKDIIDGKYWQLTSSNLDSKLRDDLERLKKIRSHRGLRHYWGLRV 131


>AE013599-2985|AAM68401.1|  152|Drosophila melanogaster CG8900-PB,
           isoform B protein.
          Length = 152

 Score =  169 bits (412), Expect = 2e-42
 Identities = 78/89 (87%), Positives = 85/89 (95%)
 Frame = +3

Query: 45  MSLVIPDKFQHILRIMNTNIDGKRKVMFAMTAIKGVGRRYSNIVLKKADIDLDKRAGECT 224
           MSLVIP+KFQHILRIMNTNIDGKRKV  AMTAIKGVGRRYSNIVLKKAD+DL KRAGECT
Sbjct: 1   MSLVIPEKFQHILRIMNTNIDGKRKVGIAMTAIKGVGRRYSNIVLKKADVDLTKRAGECT 60

Query: 225 EEEVEKIVTIMSNPRQYKIPDWFLNRQKD 311
           EEEV+K+VTI+SNP QYK+P+WFLNRQKD
Sbjct: 61  EEEVDKVVTIISNPLQYKVPNWFLNRQKD 89



 Score = 86.6 bits (205), Expect = 2e-17
 Identities = 40/58 (68%), Positives = 46/58 (79%)
 Frame = +1

Query: 265 PGNTKYQTGFSTDKRIIVDGKYSQLTSSNLDSKLREDLERLKKIRAHRGMRHYWGLRV 438
           P   K    F   ++ I+DGKY QLTSSNLDSKLR+DLERLKKIR+HRG+RHYWGLRV
Sbjct: 74  PLQYKVPNWFLNRQKDIIDGKYWQLTSSNLDSKLRDDLERLKKIRSHRGLRHYWGLRV 131


>AE013599-2984|AAF57491.1|  152|Drosophila melanogaster CG8900-PA,
           isoform A protein.
          Length = 152

 Score =  169 bits (412), Expect = 2e-42
 Identities = 78/89 (87%), Positives = 85/89 (95%)
 Frame = +3

Query: 45  MSLVIPDKFQHILRIMNTNIDGKRKVMFAMTAIKGVGRRYSNIVLKKADIDLDKRAGECT 224
           MSLVIP+KFQHILRIMNTNIDGKRKV  AMTAIKGVGRRYSNIVLKKAD+DL KRAGECT
Sbjct: 1   MSLVIPEKFQHILRIMNTNIDGKRKVGIAMTAIKGVGRRYSNIVLKKADVDLTKRAGECT 60

Query: 225 EEEVEKIVTIMSNPRQYKIPDWFLNRQKD 311
           EEEV+K+VTI+SNP QYK+P+WFLNRQKD
Sbjct: 61  EEEVDKVVTIISNPLQYKVPNWFLNRQKD 89



 Score = 86.6 bits (205), Expect = 2e-17
 Identities = 40/58 (68%), Positives = 46/58 (79%)
 Frame = +1

Query: 265 PGNTKYQTGFSTDKRIIVDGKYSQLTSSNLDSKLREDLERLKKIRAHRGMRHYWGLRV 438
           P   K    F   ++ I+DGKY QLTSSNLDSKLR+DLERLKKIR+HRG+RHYWGLRV
Sbjct: 74  PLQYKVPNWFLNRQKDIIDGKYWQLTSSNLDSKLRDDLERLKKIRSHRGLRHYWGLRV 131


>AY118434-1|AAM48463.1|  152|Drosophila melanogaster RH43343p
           protein.
          Length = 152

 Score =  166 bits (404), Expect = 1e-41
 Identities = 77/89 (86%), Positives = 84/89 (94%)
 Frame = +3

Query: 45  MSLVIPDKFQHILRIMNTNIDGKRKVMFAMTAIKGVGRRYSNIVLKKADIDLDKRAGECT 224
           MSLVIP+KFQ ILRIMNTNIDGKRKV  AMTAIKGVGRRYSNIVLKKAD+DL KRAGECT
Sbjct: 1   MSLVIPEKFQRILRIMNTNIDGKRKVGIAMTAIKGVGRRYSNIVLKKADVDLTKRAGECT 60

Query: 225 EEEVEKIVTIMSNPRQYKIPDWFLNRQKD 311
           EEEV+K+VTI+SNP QYK+P+WFLNRQKD
Sbjct: 61  EEEVDKVVTIISNPLQYKVPNWFLNRQKD 89



 Score = 86.6 bits (205), Expect = 2e-17
 Identities = 40/58 (68%), Positives = 46/58 (79%)
 Frame = +1

Query: 265 PGNTKYQTGFSTDKRIIVDGKYSQLTSSNLDSKLREDLERLKKIRAHRGMRHYWGLRV 438
           P   K    F   ++ I+DGKY QLTSSNLDSKLR+DLERLKKIR+HRG+RHYWGLRV
Sbjct: 74  PLQYKVPNWFLNRQKDIIDGKYWQLTSSNLDSKLRDDLERLKKIRSHRGLRHYWGLRV 131


>BT022499-1|AAY54915.1|  246|Drosophila melanogaster IP07925p
           protein.
          Length = 246

 Score = 92.7 bits (220), Expect = 3e-19
 Identities = 41/48 (85%), Positives = 46/48 (95%)
 Frame = +3

Query: 141 IKGVGRRYSNIVLKKADIDLDKRAGECTEEEVEKIVTIMSNPRQYKIP 284
           IKGVGRRYSNIVLKKAD+DL KRAGECTEEEV+K+VTI+SNP QYK+P
Sbjct: 1   IKGVGRRYSNIVLKKADVDLTKRAGECTEEEVDKVVTIISNPLQYKVP 48


>AY069818-1|AAL39963.1|  926|Drosophila melanogaster SD06626p
           protein.
          Length = 926

 Score = 27.9 bits (59), Expect = 9.1
 Identities = 13/27 (48%), Positives = 17/27 (62%)
 Frame = +3

Query: 192 IDLDKRAGECTEEEVEKIVTIMSNPRQ 272
           I +D +  + TEE VEKIV    NPR+
Sbjct: 209 IRIDSKTDQRTEEPVEKIVAKRFNPRR 235


>AY061500-1|AAL29048.1|  605|Drosophila melanogaster LD46023p
           protein.
          Length = 605

 Score = 27.9 bits (59), Expect = 9.1
 Identities = 17/50 (34%), Positives = 26/50 (52%)
 Frame = -3

Query: 307 FCLLRNQSGILYCLGFDMIVTIFSTSSSVHSPARLSRSISAFFNTMLEYR 158
           FC+L   + +L   G     TIF  SS + SP  +   I+A F T+++ R
Sbjct: 218 FCILLVSAAVLASFGLVENSTIFLASSMLISPL-MGPIIAAIFGTVIQDR 266


>AE014296-3738|AAN12209.2|  926|Drosophila melanogaster CG10712-PC,
           isoform C protein.
          Length = 926

 Score = 27.9 bits (59), Expect = 9.1
 Identities = 13/27 (48%), Positives = 17/27 (62%)
 Frame = +3

Query: 192 IDLDKRAGECTEEEVEKIVTIMSNPRQ 272
           I +D +  + TEE VEKIV    NPR+
Sbjct: 209 IRIDSKTDQRTEEPVEKIVAKRFNPRR 235


>AE014296-3737|AAF51877.2|  926|Drosophila melanogaster CG10712-PB,
           isoform B protein.
          Length = 926

 Score = 27.9 bits (59), Expect = 9.1
 Identities = 13/27 (48%), Positives = 17/27 (62%)
 Frame = +3

Query: 192 IDLDKRAGECTEEEVEKIVTIMSNPRQ 272
           I +D +  + TEE VEKIV    NPR+
Sbjct: 209 IRIDSKTDQRTEEPVEKIVAKRFNPRR 235


>AE014296-3736|AAF51878.2|  926|Drosophila melanogaster CG10712-PA,
           isoform A protein.
          Length = 926

 Score = 27.9 bits (59), Expect = 9.1
 Identities = 13/27 (48%), Positives = 17/27 (62%)
 Frame = +3

Query: 192 IDLDKRAGECTEEEVEKIVTIMSNPRQ 272
           I +D +  + TEE VEKIV    NPR+
Sbjct: 209 IRIDSKTDQRTEEPVEKIVAKRFNPRR 235


>AE014134-1909|AAF52968.2|  605|Drosophila melanogaster CG7384-PA
           protein.
          Length = 605

 Score = 27.9 bits (59), Expect = 9.1
 Identities = 17/50 (34%), Positives = 26/50 (52%)
 Frame = -3

Query: 307 FCLLRNQSGILYCLGFDMIVTIFSTSSSVHSPARLSRSISAFFNTMLEYR 158
           FC+L   + +L   G     TIF  SS + SP  +   I+A F T+++ R
Sbjct: 218 FCILLVSAAVLASFGLVENSTIFLASSMLISPL-MGPIIAAIFGTVIQDR 266


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,408,965
Number of Sequences: 53049
Number of extensions: 412967
Number of successful extensions: 1048
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1015
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1048
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1991467008
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)