Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0013_I20
(464 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U30504-1|AAA84389.1| 264|Homo sapiens TAFII31 protein. 128 9e-30
U25112-1|AAA91318.1| 264|Homo sapiens TBP-associated factor TAF... 128 9e-30
U21858-1|AAC50153.1| 264|Homo sapiens TAFII32 precursor protein. 128 9e-30
BT019652-1|AAV38458.1| 264|Homo sapiens TAF9 RNA polymerase II,... 128 9e-30
BC033320-1|AAH33320.1| 264|Homo sapiens TAF9 protein protein. 128 9e-30
BC003400-1|AAH03400.1| 264|Homo sapiens TAF9 RNA polymerase II,... 128 9e-30
AY189986-1|AAN84793.1| 264|Homo sapiens TAF9 RNA polymerase II,... 128 9e-30
BC071649-1|AAH71649.1| 251|Homo sapiens TAF9B RNA polymerase II... 121 1e-27
BC010350-1|AAH10350.1| 251|Homo sapiens TAF9B RNA polymerase II... 121 1e-27
BC009566-1|AAH09566.1| 251|Homo sapiens TAF9B RNA polymerase II... 121 1e-27
AL049589-2|CAI42952.1| 251|Homo sapiens TAF9B RNA polymerase II... 121 1e-27
AF220509-1|AAG09711.1| 251|Homo sapiens transcription associate... 121 1e-27
BC029430-1|AAH29430.1| 138|Homo sapiens apoptosis-inducing, TAF... 34 0.28
AL354956-7|CAI19201.1| 164|Homo sapiens apoptosis-inducing, TAF... 34 0.28
AL354956-5|CAI19199.1| 138|Homo sapiens apoptosis-inducing, TAF... 34 0.28
AL139424-7|CAI95757.1| 164|Homo sapiens apoptosis-inducing, TAF... 34 0.28
AL139424-5|CAI95755.1| 138|Homo sapiens apoptosis-inducing, TAF... 34 0.28
AF521016-1|AAM70482.1| 164|Homo sapiens unknown protein. 34 0.28
BC066906-1|AAH66906.1| 135|Homo sapiens similar to H3 histone, ... 31 1.5
BC015202-1|AAH15202.2| 561|Homo sapiens CENPT protein protein. 31 2.6
BC007864-1|AAH07864.2| 160|Homo sapiens CENPT protein protein. 31 2.6
BC007642-1|AAH07642.1| 558|Homo sapiens CENPT protein protein. 31 2.6
>U30504-1|AAA84389.1| 264|Homo sapiens TAFII31 protein.
Length = 264
Score = 128 bits (309), Expect = 9e-30
Identities = 54/92 (58%), Positives = 76/92 (82%)
Frame = +3
Query: 108 KSKGTTQTKHIPKDAQVIMSIMKEVGITDYEPRVINQLLEFTYRYVTCVLDDARVFANHA 287
+S T K +PKDAQ++ I+K++GIT+YEPRVINQ+LEF +RYVT +LDDA+++++HA
Sbjct: 2 ESGKTASPKSMPKDAQMMAQILKDMGITEYEPRVINQMLEFAFRYVTTILDDAKIYSSHA 61
Query: 288 KKKTIDLDDVRLAVQMQLDKSFTGPPPREVLV 383
KK T+D DDVRLA+Q + D+SFT PPPR+ L+
Sbjct: 62 KKATVDADDVRLAIQCRADQSFTSPPPRDFLL 93
Score = 41.5 bits (93), Expect = 0.001
Identities = 17/27 (62%), Positives = 22/27 (81%)
Frame = +1
Query: 382 LEISKVKNLNPLPLIKPHCGLRLPPDR 462
L+I++ +N PLPLIKP+ G RLPPDR
Sbjct: 93 LDIARQRNQTPLPLIKPYSGPRLPPDR 119
>U25112-1|AAA91318.1| 264|Homo sapiens TBP-associated factor
TAFII31 protein.
Length = 264
Score = 128 bits (309), Expect = 9e-30
Identities = 54/92 (58%), Positives = 76/92 (82%)
Frame = +3
Query: 108 KSKGTTQTKHIPKDAQVIMSIMKEVGITDYEPRVINQLLEFTYRYVTCVLDDARVFANHA 287
+S T K +PKDAQ++ I+K++GIT+YEPRVINQ+LEF +RYVT +LDDA+++++HA
Sbjct: 2 ESGKTASPKSMPKDAQMMAQILKDMGITEYEPRVINQMLEFAFRYVTTILDDAKIYSSHA 61
Query: 288 KKKTIDLDDVRLAVQMQLDKSFTGPPPREVLV 383
KK T+D DDVRLA+Q + D+SFT PPPR+ L+
Sbjct: 62 KKATVDADDVRLAIQCRADQSFTSPPPRDFLL 93
Score = 41.5 bits (93), Expect = 0.001
Identities = 17/27 (62%), Positives = 22/27 (81%)
Frame = +1
Query: 382 LEISKVKNLNPLPLIKPHCGLRLPPDR 462
L+I++ +N PLPLIKP+ G RLPPDR
Sbjct: 93 LDIARQRNQTPLPLIKPYSGPRLPPDR 119
>U21858-1|AAC50153.1| 264|Homo sapiens TAFII32 precursor protein.
Length = 264
Score = 128 bits (309), Expect = 9e-30
Identities = 54/92 (58%), Positives = 76/92 (82%)
Frame = +3
Query: 108 KSKGTTQTKHIPKDAQVIMSIMKEVGITDYEPRVINQLLEFTYRYVTCVLDDARVFANHA 287
+S T K +PKDAQ++ I+K++GIT+YEPRVINQ+LEF +RYVT +LDDA+++++HA
Sbjct: 2 ESGKTASPKSMPKDAQMMAQILKDMGITEYEPRVINQMLEFAFRYVTTILDDAKIYSSHA 61
Query: 288 KKKTIDLDDVRLAVQMQLDKSFTGPPPREVLV 383
KK T+D DDVRLA+Q + D+SFT PPPR+ L+
Sbjct: 62 KKATVDADDVRLAIQCRADQSFTSPPPRDFLL 93
Score = 41.5 bits (93), Expect = 0.001
Identities = 17/27 (62%), Positives = 22/27 (81%)
Frame = +1
Query: 382 LEISKVKNLNPLPLIKPHCGLRLPPDR 462
L+I++ +N PLPLIKP+ G RLPPDR
Sbjct: 93 LDIARQRNQTPLPLIKPYSGPRLPPDR 119
>BT019652-1|AAV38458.1| 264|Homo sapiens TAF9 RNA polymerase II,
TATA box binding protein (TBP)-associated factor, 32kDa
protein.
Length = 264
Score = 128 bits (309), Expect = 9e-30
Identities = 54/92 (58%), Positives = 76/92 (82%)
Frame = +3
Query: 108 KSKGTTQTKHIPKDAQVIMSIMKEVGITDYEPRVINQLLEFTYRYVTCVLDDARVFANHA 287
+S T K +PKDAQ++ I+K++GIT+YEPRVINQ+LEF +RYVT +LDDA+++++HA
Sbjct: 2 ESGKTASPKSMPKDAQMMAQILKDMGITEYEPRVINQMLEFAFRYVTTILDDAKIYSSHA 61
Query: 288 KKKTIDLDDVRLAVQMQLDKSFTGPPPREVLV 383
KK T+D DDVRLA+Q + D+SFT PPPR+ L+
Sbjct: 62 KKATVDADDVRLAIQCRADQSFTSPPPRDFLL 93
Score = 41.5 bits (93), Expect = 0.001
Identities = 17/27 (62%), Positives = 22/27 (81%)
Frame = +1
Query: 382 LEISKVKNLNPLPLIKPHCGLRLPPDR 462
L+I++ +N PLPLIKP+ G RLPPDR
Sbjct: 93 LDIARQRNQTPLPLIKPYSGPRLPPDR 119
>BC033320-1|AAH33320.1| 264|Homo sapiens TAF9 protein protein.
Length = 264
Score = 128 bits (309), Expect = 9e-30
Identities = 54/92 (58%), Positives = 76/92 (82%)
Frame = +3
Query: 108 KSKGTTQTKHIPKDAQVIMSIMKEVGITDYEPRVINQLLEFTYRYVTCVLDDARVFANHA 287
+S T K +PKDAQ++ I+K++GIT+YEPRVINQ+LEF +RYVT +LDDA+++++HA
Sbjct: 2 ESGKTASPKSMPKDAQMMAQILKDMGITEYEPRVINQMLEFAFRYVTTILDDAKIYSSHA 61
Query: 288 KKKTIDLDDVRLAVQMQLDKSFTGPPPREVLV 383
KK T+D DDVRLA+Q + D+SFT PPPR+ L+
Sbjct: 62 KKATVDADDVRLAIQCRADQSFTSPPPRDFLL 93
Score = 41.5 bits (93), Expect = 0.001
Identities = 17/27 (62%), Positives = 22/27 (81%)
Frame = +1
Query: 382 LEISKVKNLNPLPLIKPHCGLRLPPDR 462
L+I++ +N PLPLIKP+ G RLPPDR
Sbjct: 93 LDIARQRNQTPLPLIKPYSGPRLPPDR 119
>BC003400-1|AAH03400.1| 264|Homo sapiens TAF9 RNA polymerase II,
TATA box binding protein (TBP)-associated factor, 32kDa
protein.
Length = 264
Score = 128 bits (309), Expect = 9e-30
Identities = 54/92 (58%), Positives = 76/92 (82%)
Frame = +3
Query: 108 KSKGTTQTKHIPKDAQVIMSIMKEVGITDYEPRVINQLLEFTYRYVTCVLDDARVFANHA 287
+S T K +PKDAQ++ I+K++GIT+YEPRVINQ+LEF +RYVT +LDDA+++++HA
Sbjct: 2 ESGKTASPKSMPKDAQMMAQILKDMGITEYEPRVINQMLEFAFRYVTTILDDAKIYSSHA 61
Query: 288 KKKTIDLDDVRLAVQMQLDKSFTGPPPREVLV 383
KK T+D DDVRLA+Q + D+SFT PPPR+ L+
Sbjct: 62 KKATVDADDVRLAIQCRADQSFTSPPPRDFLL 93
Score = 41.5 bits (93), Expect = 0.001
Identities = 17/27 (62%), Positives = 22/27 (81%)
Frame = +1
Query: 382 LEISKVKNLNPLPLIKPHCGLRLPPDR 462
L+I++ +N PLPLIKP+ G RLPPDR
Sbjct: 93 LDIARQRNQTPLPLIKPYSGPRLPPDR 119
>AY189986-1|AAN84793.1| 264|Homo sapiens TAF9 RNA polymerase II,
TATA box binding protein (TBP)-associated factor, 32kDa
protein.
Length = 264
Score = 128 bits (309), Expect = 9e-30
Identities = 54/92 (58%), Positives = 76/92 (82%)
Frame = +3
Query: 108 KSKGTTQTKHIPKDAQVIMSIMKEVGITDYEPRVINQLLEFTYRYVTCVLDDARVFANHA 287
+S T K +PKDAQ++ I+K++GIT+YEPRVINQ+LEF +RYVT +LDDA+++++HA
Sbjct: 2 ESGKTASPKSMPKDAQMMAQILKDMGITEYEPRVINQMLEFAFRYVTTILDDAKIYSSHA 61
Query: 288 KKKTIDLDDVRLAVQMQLDKSFTGPPPREVLV 383
KK T+D DDVRLA+Q + D+SFT PPPR+ L+
Sbjct: 62 KKATVDADDVRLAIQCRADQSFTSPPPRDFLL 93
Score = 41.5 bits (93), Expect = 0.001
Identities = 17/27 (62%), Positives = 22/27 (81%)
Frame = +1
Query: 382 LEISKVKNLNPLPLIKPHCGLRLPPDR 462
L+I++ +N PLPLIKP+ G RLPPDR
Sbjct: 93 LDIARQRNQTPLPLIKPYSGPRLPPDR 119
>BC071649-1|AAH71649.1| 251|Homo sapiens TAF9B RNA polymerase II,
TATA box binding protein (TBP)-associated factor, 31kD
protein.
Length = 251
Score = 121 bits (292), Expect = 1e-27
Identities = 50/84 (59%), Positives = 71/84 (84%)
Frame = +3
Query: 132 KHIPKDAQVIMSIMKEVGITDYEPRVINQLLEFTYRYVTCVLDDARVFANHAKKKTIDLD 311
K+ P+DA V+ I+K++GIT+YEPRVINQ+LEF +RYVT +LDDA+++++HAKK +D D
Sbjct: 10 KNAPRDALVMAQILKDMGITEYEPRVINQMLEFAFRYVTTILDDAKIYSSHAKKPNVDAD 69
Query: 312 DVRLAVQMQLDKSFTGPPPREVLV 383
DVRLA+Q + D+SFT PPPR+ L+
Sbjct: 70 DVRLAIQCRADQSFTSPPPRDFLL 93
Score = 43.2 bits (97), Expect = 5e-04
Identities = 18/27 (66%), Positives = 22/27 (81%)
Frame = +1
Query: 382 LEISKVKNLNPLPLIKPHCGLRLPPDR 462
L+I++ KN PLPLIKP+ G RLPPDR
Sbjct: 93 LDIARQKNQTPLPLIKPYAGPRLPPDR 119
>BC010350-1|AAH10350.1| 251|Homo sapiens TAF9B RNA polymerase II,
TATA box binding protein (TBP)-associated factor, 31kD
protein.
Length = 251
Score = 121 bits (292), Expect = 1e-27
Identities = 50/84 (59%), Positives = 71/84 (84%)
Frame = +3
Query: 132 KHIPKDAQVIMSIMKEVGITDYEPRVINQLLEFTYRYVTCVLDDARVFANHAKKKTIDLD 311
K+ P+DA V+ I+K++GIT+YEPRVINQ+LEF +RYVT +LDDA+++++HAKK +D D
Sbjct: 10 KNAPRDALVMAQILKDMGITEYEPRVINQMLEFAFRYVTTILDDAKIYSSHAKKPNVDAD 69
Query: 312 DVRLAVQMQLDKSFTGPPPREVLV 383
DVRLA+Q + D+SFT PPPR+ L+
Sbjct: 70 DVRLAIQCRADQSFTSPPPRDFLL 93
Score = 43.2 bits (97), Expect = 5e-04
Identities = 18/27 (66%), Positives = 22/27 (81%)
Frame = +1
Query: 382 LEISKVKNLNPLPLIKPHCGLRLPPDR 462
L+I++ KN PLPLIKP+ G RLPPDR
Sbjct: 93 LDIARQKNQTPLPLIKPYAGPRLPPDR 119
>BC009566-1|AAH09566.1| 251|Homo sapiens TAF9B RNA polymerase II,
TATA box binding protein (TBP)-associated factor, 31kD
protein.
Length = 251
Score = 121 bits (292), Expect = 1e-27
Identities = 50/84 (59%), Positives = 71/84 (84%)
Frame = +3
Query: 132 KHIPKDAQVIMSIMKEVGITDYEPRVINQLLEFTYRYVTCVLDDARVFANHAKKKTIDLD 311
K+ P+DA V+ I+K++GIT+YEPRVINQ+LEF +RYVT +LDDA+++++HAKK +D D
Sbjct: 10 KNAPRDALVMAQILKDMGITEYEPRVINQMLEFAFRYVTTILDDAKIYSSHAKKPNVDAD 69
Query: 312 DVRLAVQMQLDKSFTGPPPREVLV 383
DVRLA+Q + D+SFT PPPR+ L+
Sbjct: 70 DVRLAIQCRADQSFTSPPPRDFLL 93
Score = 43.2 bits (97), Expect = 5e-04
Identities = 18/27 (66%), Positives = 22/27 (81%)
Frame = +1
Query: 382 LEISKVKNLNPLPLIKPHCGLRLPPDR 462
L+I++ KN PLPLIKP+ G RLPPDR
Sbjct: 93 LDIARQKNQTPLPLIKPYAGPRLPPDR 119
>AL049589-2|CAI42952.1| 251|Homo sapiens TAF9B RNA polymerase II,
TATA box binding proteinctase M2 polypeptide (RRM2)
protein.
Length = 251
Score = 121 bits (292), Expect = 1e-27
Identities = 50/84 (59%), Positives = 71/84 (84%)
Frame = +3
Query: 132 KHIPKDAQVIMSIMKEVGITDYEPRVINQLLEFTYRYVTCVLDDARVFANHAKKKTIDLD 311
K+ P+DA V+ I+K++GIT+YEPRVINQ+LEF +RYVT +LDDA+++++HAKK +D D
Sbjct: 10 KNAPRDALVMAQILKDMGITEYEPRVINQMLEFAFRYVTTILDDAKIYSSHAKKPNVDAD 69
Query: 312 DVRLAVQMQLDKSFTGPPPREVLV 383
DVRLA+Q + D+SFT PPPR+ L+
Sbjct: 70 DVRLAIQCRADQSFTSPPPRDFLL 93
Score = 43.2 bits (97), Expect = 5e-04
Identities = 18/27 (66%), Positives = 22/27 (81%)
Frame = +1
Query: 382 LEISKVKNLNPLPLIKPHCGLRLPPDR 462
L+I++ KN PLPLIKP+ G RLPPDR
Sbjct: 93 LDIARQKNQTPLPLIKPYAGPRLPPDR 119
>AF220509-1|AAG09711.1| 251|Homo sapiens transcription associated
factor TAFII31L protein.
Length = 251
Score = 121 bits (292), Expect = 1e-27
Identities = 50/84 (59%), Positives = 71/84 (84%)
Frame = +3
Query: 132 KHIPKDAQVIMSIMKEVGITDYEPRVINQLLEFTYRYVTCVLDDARVFANHAKKKTIDLD 311
K+ P+DA V+ I+K++GIT+YEPRVINQ+LEF +RYVT +LDDA+++++HAKK +D D
Sbjct: 10 KNAPRDALVMAQILKDMGITEYEPRVINQMLEFAFRYVTTILDDAKIYSSHAKKPNVDAD 69
Query: 312 DVRLAVQMQLDKSFTGPPPREVLV 383
DVRLA+Q + D+SFT PPPR+ L+
Sbjct: 70 DVRLAIQCRADQSFTSPPPRDFLL 93
Score = 43.2 bits (97), Expect = 5e-04
Identities = 18/27 (66%), Positives = 22/27 (81%)
Frame = +1
Query: 382 LEISKVKNLNPLPLIKPHCGLRLPPDR 462
L+I++ KN PLPLIKP+ G RLPPDR
Sbjct: 93 LDIARQKNQTPLPLIKPYAGPRLPPDR 119
>BC029430-1|AAH29430.1| 138|Homo sapiens apoptosis-inducing,
TAF9-like domain 1 protein.
Length = 138
Score = 33.9 bits (74), Expect = 0.28
Identities = 15/43 (34%), Positives = 24/43 (55%)
Frame = +3
Query: 195 YEPRVINQLLEFTYRYVTCVLDDARVFANHAKKKTIDLDDVRL 323
+ + I + E T+R D +FA HAK+ TI+ +DV+L
Sbjct: 42 FSKQTIAAISELTFRQCENFAKDLEMFARHAKRTTINTEDVKL 84
>AL354956-7|CAI19201.1| 164|Homo sapiens apoptosis-inducing,
TAF9-like domain 1 protein.
Length = 164
Score = 33.9 bits (74), Expect = 0.28
Identities = 15/43 (34%), Positives = 24/43 (55%)
Frame = +3
Query: 195 YEPRVINQLLEFTYRYVTCVLDDARVFANHAKKKTIDLDDVRL 323
+ + I + E T+R D +FA HAK+ TI+ +DV+L
Sbjct: 42 FSKQTIAAISELTFRQCENFAKDLEMFARHAKRTTINTEDVKL 84
>AL354956-5|CAI19199.1| 138|Homo sapiens apoptosis-inducing,
TAF9-like domain 1 protein.
Length = 138
Score = 33.9 bits (74), Expect = 0.28
Identities = 15/43 (34%), Positives = 24/43 (55%)
Frame = +3
Query: 195 YEPRVINQLLEFTYRYVTCVLDDARVFANHAKKKTIDLDDVRL 323
+ + I + E T+R D +FA HAK+ TI+ +DV+L
Sbjct: 42 FSKQTIAAISELTFRQCENFAKDLEMFARHAKRTTINTEDVKL 84
>AL139424-7|CAI95757.1| 164|Homo sapiens apoptosis-inducing,
TAF9-like domain 1 protein.
Length = 164
Score = 33.9 bits (74), Expect = 0.28
Identities = 15/43 (34%), Positives = 24/43 (55%)
Frame = +3
Query: 195 YEPRVINQLLEFTYRYVTCVLDDARVFANHAKKKTIDLDDVRL 323
+ + I + E T+R D +FA HAK+ TI+ +DV+L
Sbjct: 42 FSKQTIAAISELTFRQCENFAKDLEMFARHAKRTTINTEDVKL 84
>AL139424-5|CAI95755.1| 138|Homo sapiens apoptosis-inducing,
TAF9-like domain 1 protein.
Length = 138
Score = 33.9 bits (74), Expect = 0.28
Identities = 15/43 (34%), Positives = 24/43 (55%)
Frame = +3
Query: 195 YEPRVINQLLEFTYRYVTCVLDDARVFANHAKKKTIDLDDVRL 323
+ + I + E T+R D +FA HAK+ TI+ +DV+L
Sbjct: 42 FSKQTIAAISELTFRQCENFAKDLEMFARHAKRTTINTEDVKL 84
>AF521016-1|AAM70482.1| 164|Homo sapiens unknown protein.
Length = 164
Score = 33.9 bits (74), Expect = 0.28
Identities = 15/43 (34%), Positives = 24/43 (55%)
Frame = +3
Query: 195 YEPRVINQLLEFTYRYVTCVLDDARVFANHAKKKTIDLDDVRL 323
+ + I + E T+R D +FA HAK+ TI+ +DV+L
Sbjct: 42 FSKQTIAAISELTFRQCENFAKDLEMFARHAKRTTINTEDVKL 84
>BC066906-1|AAH66906.1| 135|Homo sapiens similar to H3 histone,
family 3B protein.
Length = 135
Score = 31.5 bits (68), Expect = 1.5
Identities = 15/52 (28%), Positives = 32/52 (61%)
Frame = +3
Query: 195 YEPRVINQLLEFTYRYVTCVLDDARVFANHAKKKTIDLDDVRLAVQMQLDKS 350
++ V+ L E + Y+ +L+D + A HAK+ TI D++LA +++ +++
Sbjct: 84 FQSAVVGALQEASEAYLVGLLEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 135
>BC015202-1|AAH15202.2| 561|Homo sapiens CENPT protein protein.
Length = 561
Score = 30.7 bits (66), Expect = 2.6
Identities = 13/34 (38%), Positives = 21/34 (61%)
Frame = +3
Query: 237 RYVTCVLDDARVFANHAKKKTIDLDDVRLAVQMQ 338
+Y + DD VFA HA +KT+ +D+ L ++ Q
Sbjct: 489 KYFQHLCDDLEVFAAHAGRKTVKPEDLELLMRRQ 522
>BC007864-1|AAH07864.2| 160|Homo sapiens CENPT protein protein.
Length = 160
Score = 30.7 bits (66), Expect = 2.6
Identities = 13/34 (38%), Positives = 21/34 (61%)
Frame = +3
Query: 237 RYVTCVLDDARVFANHAKKKTIDLDDVRLAVQMQ 338
+Y + DD VFA HA +KT+ +D+ L ++ Q
Sbjct: 88 KYFQHLCDDLEVFAAHAGRKTVKPEDLELLMRRQ 121
>BC007642-1|AAH07642.1| 558|Homo sapiens CENPT protein protein.
Length = 558
Score = 30.7 bits (66), Expect = 2.6
Identities = 13/34 (38%), Positives = 21/34 (61%)
Frame = +3
Query: 237 RYVTCVLDDARVFANHAKKKTIDLDDVRLAVQMQ 338
+Y + DD VFA HA +KT+ +D+ L ++ Q
Sbjct: 486 KYFQHLCDDLEVFAAHAGRKTVKPEDLELLMRRQ 519
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 63,815,099
Number of Sequences: 237096
Number of extensions: 1171273
Number of successful extensions: 2270
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 2218
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2270
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 3986009860
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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