Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0013_I20
         (464 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81120-5|CAB03347.1|  183|Caenorhabditis elegans Hypothetical pr...    56   1e-08
AC006733-8|AAF60490.1|  600|Caenorhabditis elegans Hypothetical ...    28   2.9  
AF101309-1|AAL32229.1| 1680|Caenorhabditis elegans Hypothetical ...    27   5.0  
Z93388-10|CAB07657.1|  103|Caenorhabditis elegans Hypothetical p...    27   6.6  
Z83245-8|CAB05839.1|  103|Caenorhabditis elegans Hypothetical pr...    27   6.6  
Z83245-4|CAB05837.1|  103|Caenorhabditis elegans Hypothetical pr...    27   6.6  
Z83245-1|CAB05835.4|  103|Caenorhabditis elegans Hypothetical pr...    27   6.6  
Z82271-2|CAB05210.1|  103|Caenorhabditis elegans Hypothetical pr...    27   6.6  
Z81128-5|CAB03396.1|  103|Caenorhabditis elegans Hypothetical pr...    27   6.6  
Z73102-10|CAA97407.1|  103|Caenorhabditis elegans Hypothetical p...    27   6.6  
Z70750-7|CAA94742.1|  103|Caenorhabditis elegans Hypothetical pr...    27   6.6  
Z68336-1|CAA92734.1|  103|Caenorhabditis elegans Hypothetical pr...    27   6.6  
X15634-1|CAA33643.1|  103|Caenorhabditis elegans Histone protein...    27   6.6  
U64845-10|AAC48026.1|  103|Caenorhabditis elegans Histone protei...    27   6.6  
U64843-10|AAF98220.1|  103|Caenorhabditis elegans Histone protei...    27   6.6  
U64843-3|AAF98223.1|  103|Caenorhabditis elegans Histone protein...    27   6.6  
U58750-9|AAB00649.2|  103|Caenorhabditis elegans Histone protein...    27   6.6  
U41625-6|AAA83329.1|  103|Caenorhabditis elegans Histone protein...    27   6.6  
AF047656-2|AAC05101.1|  103|Caenorhabditis elegans Histone prote...    27   6.6  
AF016451-9|AAB66005.2|  524|Caenorhabditis elegans Udp-glucurono...    27   6.6  
AC024696-3|AAK84518.1|  103|Caenorhabditis elegans Histone prote...    27   6.6  
AF067219-16|AAC17022.1|  531|Caenorhabditis elegans Hypothetical...    27   8.8  

>Z81120-5|CAB03347.1|  183|Caenorhabditis elegans Hypothetical
           protein T12D8.7 protein.
          Length = 183

 Score = 56.0 bits (129), Expect = 1e-08
 Identities = 29/96 (30%), Positives = 53/96 (55%)
 Frame = +3

Query: 99  EKDKSKGTTQTKHIPKDAQVIMSIMKEVGITDYEPRVINQLLEFTYRYVTCVLDDARVFA 278
           EKD     + T    K+A  ++S++ E GI +++PRV++ L++  Y   + +L  +   +
Sbjct: 6   EKDTETTASGTDGHSKEALAVISMLHECGIQEFDPRVVSMLMDVQYAVTSKILQMSSGLS 65

Query: 279 NHAKKKTIDLDDVRLAVQMQLDKSFTGPPPREVLVR 386
            HA+K  I+ +DV+ A  M L    T  P RE +++
Sbjct: 66  RHAEKAQIEAEDVQTAADM-LGVLTTNAPDREKILQ 100



 Score = 31.9 bits (69), Expect = 0.23
 Identities = 16/32 (50%), Positives = 22/32 (68%)
 Frame = +1

Query: 367 REKCWLEISKVKNLNPLPLIKPHCGLRLPPDR 462
           REK  L+++  KN  PLP I+ + GL+LP DR
Sbjct: 95  REKI-LQLANDKNQQPLPQIRHNYGLKLPNDR 125


>AC006733-8|AAF60490.1|  600|Caenorhabditis elegans Hypothetical
           protein Y32H12A.7 protein.
          Length = 600

 Score = 28.3 bits (60), Expect = 2.9
 Identities = 9/30 (30%), Positives = 20/30 (66%)
 Frame = -1

Query: 275 KYPCIVQHTSHITIRKFQELVYNSRLVVRD 186
           K+P ++ +T ++ +  F+E +Y +RLV  +
Sbjct: 317 KFPIVLGYTKNVIVETFEEGIYINRLVAEE 346


>AF101309-1|AAL32229.1| 1680|Caenorhabditis elegans Hypothetical
            protein H24G06.1a protein.
          Length = 1680

 Score = 27.5 bits (58), Expect = 5.0
 Identities = 24/88 (27%), Positives = 40/88 (45%), Gaps = 4/88 (4%)
 Frame = +3

Query: 87   NKMSEKDKSKGTTQTKHIPKDAQVIMSIMKEVGITDYEPRVINQLLEFTYRYVTCVLDDA 266
            +K  +K +   T QT+ I  D +V+ S    +  T +EP+  N++       VT    DA
Sbjct: 1133 DKQPQKLRFTTTVQTREISLDDEVVESDDDAITSTTFEPKYKNRIGYRRPSTVTVDTRDA 1192

Query: 267  ----RVFANHAKKKTIDLDDVRLAVQMQ 338
                R  A  + KK+   DD+  A  ++
Sbjct: 1193 DVARRRVAGTSFKKSDRADDLNFASSLR 1220


>Z93388-10|CAB07657.1|  103|Caenorhabditis elegans Hypothetical
           protein T10C6.14 protein.
          Length = 103

 Score = 27.1 bits (57), Expect = 6.6
 Identities = 12/29 (41%), Positives = 18/29 (62%)
 Frame = +3

Query: 252 VLDDARVFANHAKKKTIDLDDVRLAVQMQ 338
           V+ DA  +  HAK+KT+   DV  A++ Q
Sbjct: 66  VIRDAVTYCEHAKRKTVTAMDVVYALKRQ 94


>Z83245-8|CAB05839.1|  103|Caenorhabditis elegans Hypothetical
           protein ZK131.8 protein.
          Length = 103

 Score = 27.1 bits (57), Expect = 6.6
 Identities = 12/29 (41%), Positives = 18/29 (62%)
 Frame = +3

Query: 252 VLDDARVFANHAKKKTIDLDDVRLAVQMQ 338
           V+ DA  +  HAK+KT+   DV  A++ Q
Sbjct: 66  VIRDAVTYCEHAKRKTVTAMDVVYALKRQ 94


>Z83245-4|CAB05837.1|  103|Caenorhabditis elegans Hypothetical
           protein ZK131.4 protein.
          Length = 103

 Score = 27.1 bits (57), Expect = 6.6
 Identities = 12/29 (41%), Positives = 18/29 (62%)
 Frame = +3

Query: 252 VLDDARVFANHAKKKTIDLDDVRLAVQMQ 338
           V+ DA  +  HAK+KT+   DV  A++ Q
Sbjct: 66  VIRDAVTYCEHAKRKTVTAMDVVYALKRQ 94


>Z83245-1|CAB05835.4|  103|Caenorhabditis elegans Hypothetical
           protein ZK131.1 protein.
          Length = 103

 Score = 27.1 bits (57), Expect = 6.6
 Identities = 12/29 (41%), Positives = 18/29 (62%)
 Frame = +3

Query: 252 VLDDARVFANHAKKKTIDLDDVRLAVQMQ 338
           V+ DA  +  HAK+KT+   DV  A++ Q
Sbjct: 66  VIRDAVTYCEHAKRKTVTAMDVVYALKRQ 94


>Z82271-2|CAB05210.1|  103|Caenorhabditis elegans Hypothetical
           protein F54E12.3 protein.
          Length = 103

 Score = 27.1 bits (57), Expect = 6.6
 Identities = 12/29 (41%), Positives = 18/29 (62%)
 Frame = +3

Query: 252 VLDDARVFANHAKKKTIDLDDVRLAVQMQ 338
           V+ DA  +  HAK+KT+   DV  A++ Q
Sbjct: 66  VIRDAVTYCEHAKRKTVTAMDVVYALKRQ 94


>Z81128-5|CAB03396.1|  103|Caenorhabditis elegans Hypothetical
           protein T23D8.5 protein.
          Length = 103

 Score = 27.1 bits (57), Expect = 6.6
 Identities = 12/29 (41%), Positives = 18/29 (62%)
 Frame = +3

Query: 252 VLDDARVFANHAKKKTIDLDDVRLAVQMQ 338
           V+ DA  +  HAK+KT+   DV  A++ Q
Sbjct: 66  VIRDAVTYCEHAKRKTVTAMDVVYALKRQ 94


>Z73102-10|CAA97407.1|  103|Caenorhabditis elegans Hypothetical
           protein B0035.9 protein.
          Length = 103

 Score = 27.1 bits (57), Expect = 6.6
 Identities = 12/29 (41%), Positives = 18/29 (62%)
 Frame = +3

Query: 252 VLDDARVFANHAKKKTIDLDDVRLAVQMQ 338
           V+ DA  +  HAK+KT+   DV  A++ Q
Sbjct: 66  VIRDAVTYCEHAKRKTVTAMDVVYALKRQ 94


>Z70750-7|CAA94742.1|  103|Caenorhabditis elegans Hypothetical
           protein C50F4.7 protein.
          Length = 103

 Score = 27.1 bits (57), Expect = 6.6
 Identities = 12/29 (41%), Positives = 18/29 (62%)
 Frame = +3

Query: 252 VLDDARVFANHAKKKTIDLDDVRLAVQMQ 338
           V+ DA  +  HAK+KT+   DV  A++ Q
Sbjct: 66  VIRDAVTYCEHAKRKTVTAMDVVYALKRQ 94


>Z68336-1|CAA92734.1|  103|Caenorhabditis elegans Hypothetical
           protein F22B3.1 protein.
          Length = 103

 Score = 27.1 bits (57), Expect = 6.6
 Identities = 12/29 (41%), Positives = 18/29 (62%)
 Frame = +3

Query: 252 VLDDARVFANHAKKKTIDLDDVRLAVQMQ 338
           V+ DA  +  HAK+KT+   DV  A++ Q
Sbjct: 66  VIRDAVTYCEHAKRKTVTAMDVVYALKRQ 94


>X15634-1|CAA33643.1|  103|Caenorhabditis elegans Histone protein
           protein.
          Length = 103

 Score = 27.1 bits (57), Expect = 6.6
 Identities = 12/29 (41%), Positives = 18/29 (62%)
 Frame = +3

Query: 252 VLDDARVFANHAKKKTIDLDDVRLAVQMQ 338
           V+ DA  +  HAK+KT+   DV  A++ Q
Sbjct: 66  VIRDAVTYCEHAKRKTVTAMDVVYALKRQ 94


>U64845-10|AAC48026.1|  103|Caenorhabditis elegans Histone protein 5
           protein.
          Length = 103

 Score = 27.1 bits (57), Expect = 6.6
 Identities = 12/29 (41%), Positives = 18/29 (62%)
 Frame = +3

Query: 252 VLDDARVFANHAKKKTIDLDDVRLAVQMQ 338
           V+ DA  +  HAK+KT+   DV  A++ Q
Sbjct: 66  VIRDAVTYCEHAKRKTVTAMDVVYALKRQ 94


>U64843-10|AAF98220.1|  103|Caenorhabditis elegans Histone protein
           18 protein.
          Length = 103

 Score = 27.1 bits (57), Expect = 6.6
 Identities = 12/29 (41%), Positives = 18/29 (62%)
 Frame = +3

Query: 252 VLDDARVFANHAKKKTIDLDDVRLAVQMQ 338
           V+ DA  +  HAK+KT+   DV  A++ Q
Sbjct: 66  VIRDAVTYCEHAKRKTVTAMDVVYALKRQ 94


>U64843-3|AAF98223.1|  103|Caenorhabditis elegans Histone protein 28
           protein.
          Length = 103

 Score = 27.1 bits (57), Expect = 6.6
 Identities = 12/29 (41%), Positives = 18/29 (62%)
 Frame = +3

Query: 252 VLDDARVFANHAKKKTIDLDDVRLAVQMQ 338
           V+ DA  +  HAK+KT+   DV  A++ Q
Sbjct: 66  VIRDAVTYCEHAKRKTVTAMDVVYALKRQ 94


>U58750-9|AAB00649.2|  103|Caenorhabditis elegans Histone protein 60
           protein.
          Length = 103

 Score = 27.1 bits (57), Expect = 6.6
 Identities = 12/29 (41%), Positives = 18/29 (62%)
 Frame = +3

Query: 252 VLDDARVFANHAKKKTIDLDDVRLAVQMQ 338
           V+ DA  +  HAK+KT+   DV  A++ Q
Sbjct: 66  VIRDAVTYCEHAKRKTVTAMDVVYALKRQ 94


>U41625-6|AAA83329.1|  103|Caenorhabditis elegans Histone protein 38
           protein.
          Length = 103

 Score = 27.1 bits (57), Expect = 6.6
 Identities = 12/29 (41%), Positives = 18/29 (62%)
 Frame = +3

Query: 252 VLDDARVFANHAKKKTIDLDDVRLAVQMQ 338
           V+ DA  +  HAK+KT+   DV  A++ Q
Sbjct: 66  VIRDAVTYCEHAKRKTVTAMDVVYALKRQ 94


>AF047656-2|AAC05101.1|  103|Caenorhabditis elegans Histone protein
           31 protein.
          Length = 103

 Score = 27.1 bits (57), Expect = 6.6
 Identities = 12/29 (41%), Positives = 18/29 (62%)
 Frame = +3

Query: 252 VLDDARVFANHAKKKTIDLDDVRLAVQMQ 338
           V+ DA  +  HAK+KT+   DV  A++ Q
Sbjct: 66  VIRDAVTYCEHAKRKTVTAMDVVYALKRQ 94


>AF016451-9|AAB66005.2|  524|Caenorhabditis elegans
           Udp-glucuronosyltransferase protein51 protein.
          Length = 524

 Score = 27.1 bits (57), Expect = 6.6
 Identities = 10/37 (27%), Positives = 17/37 (45%)
 Frame = -1

Query: 269 PCIVQHTSHITIRKFQELVYNSRLVVRDPYFLHNRHN 159
           P ++   SH+ +  F E  Y  + ++  P F    HN
Sbjct: 361 PRVIGFISHVGLNSFNEASYAGKPIIAIPLFADQPHN 397


>AC024696-3|AAK84518.1|  103|Caenorhabditis elegans Histone protein
           50 protein.
          Length = 103

 Score = 27.1 bits (57), Expect = 6.6
 Identities = 12/29 (41%), Positives = 18/29 (62%)
 Frame = +3

Query: 252 VLDDARVFANHAKKKTIDLDDVRLAVQMQ 338
           V+ DA  +  HAK+KT+   DV  A++ Q
Sbjct: 66  VIRDAVTYCEHAKRKTVTAMDVVYALKRQ 94


>AF067219-16|AAC17022.1|  531|Caenorhabditis elegans Hypothetical
           protein R12E2.1 protein.
          Length = 531

 Score = 26.6 bits (56), Expect = 8.8
 Identities = 12/41 (29%), Positives = 22/41 (53%)
 Frame = +3

Query: 150 AQVIMSIMKEVGITDYEPRVINQLLEFTYRYVTCVLDDARV 272
           +Q+    M+E+ + + EP  +  L+EF Y     + DD+ V
Sbjct: 87  SQMAECYMREINMEEIEPPTLEALIEFCYTGAIAI-DDSNV 126


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,323,141
Number of Sequences: 27780
Number of extensions: 203093
Number of successful extensions: 620
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 610
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 620
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 829055604
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)