Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0013_I14
(310 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z66519-3|CAA91372.1| 634|Caenorhabditis elegans Hypothetical pr... 77 3e-15
Z66519-2|CAA91381.1| 634|Caenorhabditis elegans Hypothetical pr... 77 3e-15
U09415-1|AAA82164.1| 655|Caenorhabditis elegans Ceprp21 protein. 27 2.0
AF106576-5|AAC78179.1| 655|Caenorhabditis elegans Yeast prp (sp... 27 2.0
Z70286-6|CAA94293.1| 3672|Caenorhabditis elegans Hypothetical pr... 27 3.5
Z70286-5|CAB61016.1| 3704|Caenorhabditis elegans Hypothetical pr... 27 3.5
AB016806-1|BAA32347.1| 3704|Caenorhabditis elegans laminin alpha... 27 3.5
AB001074-1|BAA19229.1| 3704|Caenorhabditis elegans laminin alpha... 27 3.5
U41994-9|AAK31523.1| 786|Caenorhabditis elegans Hypothetical pr... 26 4.7
U58748-8|AAM97986.1| 497|Caenorhabditis elegans Hypothetical pr... 25 8.1
U23412-5|AAK21467.2| 492|Caenorhabditis elegans Hypothetical pr... 25 8.1
AF024500-4|AAB70365.1| 335|Caenorhabditis elegans Hypothetical ... 25 8.1
>Z66519-3|CAA91372.1| 634|Caenorhabditis elegans Hypothetical
protein B0334.3b protein.
Length = 634
Score = 77.0 bits (181), Expect = 3e-15
Identities = 42/103 (40%), Positives = 56/103 (54%), Gaps = 1/103 (0%)
Frame = +1
Query: 4 EGIGGFQEWPHVESSRLYCKYAARPPSPRLIPQHVEKAVMLASAGRPGVSYLDVPGTLLM 183
E G FQEW ES R CK+ +RP S IP H+EKAV A GRPG Y+D+PG L++
Sbjct: 175 ENRGAFQEWSQQESVRNSCKHVSRPTSLHTIPAHIEKAVRCAMYGRPGAVYVDLPGNLVL 234
Query: 184 AEVDEN-KVPMNYHNADTVTLAHPHPALVAQAADLLAKAERPL 309
+E P V++ P A + +A D L A++PL
Sbjct: 235 TSTEEEISFPPQVPLPAPVSI--PPIAEIEKAIDTLKSAKKPL 275
>Z66519-2|CAA91381.1| 634|Caenorhabditis elegans Hypothetical
protein B0334.3a protein.
Length = 634
Score = 77.0 bits (181), Expect = 3e-15
Identities = 42/103 (40%), Positives = 56/103 (54%), Gaps = 1/103 (0%)
Frame = +1
Query: 4 EGIGGFQEWPHVESSRLYCKYAARPPSPRLIPQHVEKAVMLASAGRPGVSYLDVPGTLLM 183
E G FQEW ES R CK+ +RP S IP H+EKAV A GRPG Y+D+PG L++
Sbjct: 175 ENRGAFQEWSQQESVRNSCKHVSRPTSLHTIPAHIEKAVRCAMYGRPGAVYVDLPGNLVL 234
Query: 184 AEVDEN-KVPMNYHNADTVTLAHPHPALVAQAADLLAKAERPL 309
+E P V++ P A + +A D L A++PL
Sbjct: 235 TSTEEEISFPPQVPLPAPVSI--PPIAEIEKAIDTLKSAKKPL 275
>U09415-1|AAA82164.1| 655|Caenorhabditis elegans Ceprp21 protein.
Length = 655
Score = 27.5 bits (58), Expect = 2.0
Identities = 12/40 (30%), Positives = 21/40 (52%)
Frame = +1
Query: 76 PPSPRLIPQHVEKAVMLASAGRPGVSYLDVPGTLLMAEVD 195
P P+ + +HV+KA + SA P + P T+ ++D
Sbjct: 94 PKVPQAVKEHVKKAEFVPSAPPPAYEFSADPSTINAYDLD 133
>AF106576-5|AAC78179.1| 655|Caenorhabditis elegans Yeast prp
(splicing factor) relatedprotein 21 protein.
Length = 655
Score = 27.5 bits (58), Expect = 2.0
Identities = 12/40 (30%), Positives = 21/40 (52%)
Frame = +1
Query: 76 PPSPRLIPQHVEKAVMLASAGRPGVSYLDVPGTLLMAEVD 195
P P+ + +HV+KA + SA P + P T+ ++D
Sbjct: 94 PKVPQAVKEHVKKAEFVPSAPPPAYEFSADPSTINAYDLD 133
>Z70286-6|CAA94293.1| 3672|Caenorhabditis elegans Hypothetical protein
K08C7.3b protein.
Length = 3672
Score = 26.6 bits (56), Expect = 3.5
Identities = 12/22 (54%), Positives = 13/22 (59%)
Frame = +1
Query: 190 VDENKVPMNYHNADTVTLAHPH 255
VD +KVP NY N D T A H
Sbjct: 1033 VDMDKVPFNYINEDGTTTALEH 1054
>Z70286-5|CAB61016.1| 3704|Caenorhabditis elegans Hypothetical protein
K08C7.3a protein.
Length = 3704
Score = 26.6 bits (56), Expect = 3.5
Identities = 12/22 (54%), Positives = 13/22 (59%)
Frame = +1
Query: 190 VDENKVPMNYHNADTVTLAHPH 255
VD +KVP NY N D T A H
Sbjct: 1033 VDMDKVPFNYINEDGTTTALEH 1054
>AB016806-1|BAA32347.1| 3704|Caenorhabditis elegans laminin alpha
chain protein.
Length = 3704
Score = 26.6 bits (56), Expect = 3.5
Identities = 12/22 (54%), Positives = 13/22 (59%)
Frame = +1
Query: 190 VDENKVPMNYHNADTVTLAHPH 255
VD +KVP NY N D T A H
Sbjct: 1033 VDMDKVPFNYINEDGTTTALEH 1054
>AB001074-1|BAA19229.1| 3704|Caenorhabditis elegans laminin alpha
protein.
Length = 3704
Score = 26.6 bits (56), Expect = 3.5
Identities = 12/22 (54%), Positives = 13/22 (59%)
Frame = +1
Query: 190 VDENKVPMNYHNADTVTLAHPH 255
VD +KVP NY N D T A H
Sbjct: 1033 VDMDKVPFNYINEDGTTTALEH 1054
>U41994-9|AAK31523.1| 786|Caenorhabditis elegans Hypothetical
protein F59A6.3 protein.
Length = 786
Score = 26.2 bits (55), Expect = 4.7
Identities = 16/38 (42%), Positives = 23/38 (60%)
Frame = -3
Query: 209 GTLFSSTSAISRVPGTSR*ETPGRPAEASITAFSTCCG 96
G+LFS++ S+ PG+S TPG P+ S + ST G
Sbjct: 378 GSLFSTSLGSSQSPGSSVSTTPG-PSTISGISQSTTSG 414
>U58748-8|AAM97986.1| 497|Caenorhabditis elegans Hypothetical
protein ZK180.5b protein.
Length = 497
Score = 25.4 bits (53), Expect = 8.1
Identities = 13/42 (30%), Positives = 21/42 (50%)
Frame = +1
Query: 79 PSPRLIPQHVEKAVMLASAGRPGVSYLDVPGTLLMAEVDENK 204
P P++IPQ E V ++ P V+ +P A +E+K
Sbjct: 401 PQPQVIPQAPETFVETSAPVAPQVTEYPIPAAQTEAPEEESK 442
>U23412-5|AAK21467.2| 492|Caenorhabditis elegans Hypothetical
protein T10F2.4 protein.
Length = 492
Score = 25.4 bits (53), Expect = 8.1
Identities = 13/43 (30%), Positives = 20/43 (46%), Gaps = 1/43 (2%)
Frame = +1
Query: 130 SAGRPGVSYLDVPGTL-LMAEVDENKVPMNYHNADTVTLAHPH 255
S G PG++ LD+ G L L +D+ V +Y + H
Sbjct: 208 STGTPGITALDIKGNLSLTGGIDKTVVLYDYEKEQVMQTFKGH 250
>AF024500-4|AAB70365.1| 335|Caenorhabditis elegans Hypothetical
protein K06H6.6 protein.
Length = 335
Score = 25.4 bits (53), Expect = 8.1
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = -3
Query: 152 ETPGRPAEASITAFSTCCGIRRGDGGRAAYLQ 57
E G +++ T+F TC IRRGD R + +
Sbjct: 170 ENFGSLPKSNETSFVTCVHIRRGDFKRVGFAE 201
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.316 0.133 0.403
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,776,215
Number of Sequences: 27780
Number of extensions: 122972
Number of successful extensions: 368
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 357
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 368
length of database: 12,740,198
effective HSP length: 71
effective length of database: 10,767,818
effective search space used: 333802358
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
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