Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0013_I13
(444 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC821.06 |spn2||septin Spn2|Schizosaccharomyces pombe|chr 1|||... 27 1.7
SPBC11C11.04c |alp1||tubulin specific chaperone cofactor D |Schi... 26 3.0
SPAC24C9.15c |spn5|mde9, meu28|septin Spn5|Schizosaccharomyces p... 26 3.0
SPCC1840.08c |||protein disulfide isomerase |Schizosaccharomyces... 25 4.0
SPBC1105.10 |rav1||RAVE complex subunit Rav1 |Schizosaccharomyce... 25 4.0
SPCC188.12 |spn6|SPCC584.09|septin Spn6|Schizosaccharomyces pomb... 25 5.2
SPAC3G9.12 |peg1|cls1|CLASP family microtubule-associated protei... 25 5.2
SPBC21H7.03c |||acid phosphatase |Schizosaccharomyces pombe|chr ... 25 6.9
SPAC9G1.11c |spn4||septin Spn4|Schizosaccharomyces pombe|chr 1||... 25 6.9
SPAC821.04c |cid13||poly|Schizosaccharomyces pombe|chr 1|||Manual 25 6.9
SPCC70.09c |mug9||conserved fungal protein|Schizosaccharomyces p... 25 6.9
SPAC9E9.05 |||sequence orphan|Schizosaccharomyces pombe|chr 1|||... 24 9.1
SPBPB2B2.10c |||galactose-1-phosphate uridylyltransferase |Schiz... 24 9.1
SPBC28F2.11 |||INO80 complex subunit |Schizosaccharomyces pombe|... 24 9.1
SPCC1183.01 |sec15|SPCC1672.13|exocyst complex subunit Sec15 |Sc... 24 9.1
>SPAC821.06 |spn2||septin Spn2|Schizosaccharomyces pombe|chr
1|||Manual
Length = 331
Score = 26.6 bits (56), Expect = 1.7
Identities = 11/34 (32%), Positives = 19/34 (55%)
Frame = +2
Query: 167 SEVQKRPCLFDSNDPNYGDRAEKTRCWEEVCESV 268
+ VQ + L D+ P YGD+ +CWE + + +
Sbjct: 86 NRVQLQLNLIDT--PGYGDQINNDKCWEPIIKYI 117
>SPBC11C11.04c |alp1||tubulin specific chaperone cofactor D
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1107
Score = 25.8 bits (54), Expect = 3.0
Identities = 12/29 (41%), Positives = 20/29 (68%)
Frame = +3
Query: 306 LPLVKKYIRDGVRYATRIQRRTVRENASC 392
LPL++ + VRY TR+ +++R+ ASC
Sbjct: 407 LPLIEVGLSYEVRYGTRVTGQSIRD-ASC 434
>SPAC24C9.15c |spn5|mde9, meu28|septin Spn5|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 464
Score = 25.8 bits (54), Expect = 3.0
Identities = 8/44 (18%), Positives = 24/44 (54%)
Frame = +2
Query: 140 DGIKSSLIISEVQKRPCLFDSNDPNYGDRAEKTRCWEEVCESVV 271
D ++ +S+ ++ L + P +GD+++ + CW + +++
Sbjct: 153 DFVEHKATLSDGDQKFNLTIVDTPGFGDKSDNSNCWRPIATNLL 196
>SPCC1840.08c |||protein disulfide isomerase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 561
Score = 25.4 bits (53), Expect = 4.0
Identities = 10/29 (34%), Positives = 19/29 (65%)
Frame = +2
Query: 128 SRDNDGIKSSLIISEVQKRPCLFDSNDPN 214
+RDN G++ L++S ++R L ++N N
Sbjct: 64 NRDNQGVREELLVSSFKERK-LLNTNSAN 91
>SPBC1105.10 |rav1||RAVE complex subunit Rav1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1297
Score = 25.4 bits (53), Expect = 4.0
Identities = 13/60 (21%), Positives = 27/60 (45%)
Frame = +2
Query: 149 KSSLIISEVQKRPCLFDSNDPNYGDRAEKTRCWEEVCESVVPSWTSLGSSEKFTAGKEVH 328
K ++SE +R +FD+ + ++ E + +++ WTS +S A +H
Sbjct: 613 KKVAVVSENNRRLSIFDTRSSEFSEKEEFSSVFDDYGPINDLDWTSTPNSHSILAVGFLH 672
>SPCC188.12 |spn6|SPCC584.09|septin Spn6|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 380
Score = 25.0 bits (52), Expect = 5.2
Identities = 8/18 (44%), Positives = 10/18 (55%)
Frame = +2
Query: 209 PNYGDRAEKTRCWEEVCE 262
P +GD + T CW V E
Sbjct: 97 PGFGDFIDNTSCWNTVAE 114
>SPAC3G9.12 |peg1|cls1|CLASP family microtubule-associated
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1462
Score = 25.0 bits (52), Expect = 5.2
Identities = 8/17 (47%), Positives = 13/17 (76%)
Frame = -3
Query: 373 TVRLCIRVAYRTPSLMY 323
T++ CI+V TPS++Y
Sbjct: 1252 TLKFCIKVCKETPSMLY 1268
>SPBC21H7.03c |||acid phosphatase |Schizosaccharomyces pombe|chr
2|||Manual
Length = 463
Score = 24.6 bits (51), Expect = 6.9
Identities = 10/26 (38%), Positives = 17/26 (65%)
Frame = +2
Query: 281 TSLGSSEKFTAGKEVHQRWRPIRDSY 358
+S G E F G++++QR+ + DSY
Sbjct: 131 SSRGRLELFDLGRQLYQRYYKLFDSY 156
>SPAC9G1.11c |spn4||septin Spn4|Schizosaccharomyces pombe|chr
1|||Manual
Length = 380
Score = 24.6 bits (51), Expect = 6.9
Identities = 8/20 (40%), Positives = 11/20 (55%)
Frame = +2
Query: 209 PNYGDRAEKTRCWEEVCESV 268
P +GD + CWE V E +
Sbjct: 95 PGFGDFINNSGCWESVVEFI 114
>SPAC821.04c |cid13||poly|Schizosaccharomyces pombe|chr 1|||Manual
Length = 578
Score = 24.6 bits (51), Expect = 6.9
Identities = 8/22 (36%), Positives = 14/22 (63%)
Frame = +3
Query: 378 ENASCPSNCPPNSRRYQYHRQM 443
+NA+C C +R +QY R++
Sbjct: 2 DNANCVGGCKFETRSFQYRRRI 23
>SPCC70.09c |mug9||conserved fungal protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 208
Score = 24.6 bits (51), Expect = 6.9
Identities = 12/33 (36%), Positives = 17/33 (51%), Gaps = 3/33 (9%)
Frame = +2
Query: 188 CLFDSNDPN---YGDRAEKTRCWEEVCESVVPS 277
C D+N+P Y E R W++V E VP+
Sbjct: 47 CQPDTNNPTRWKYERPLETIRAWQDVAEGKVPA 79
>SPAC9E9.05 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 313
Score = 24.2 bits (50), Expect = 9.1
Identities = 11/33 (33%), Positives = 16/33 (48%)
Frame = +2
Query: 125 RSRDNDGIKSSLIISEVQKRPCLFDSNDPNYGD 223
R RD+D S L ++ P + DP+Y D
Sbjct: 195 RRRDDDIDLSGLYETKSSSPPAIHSDEDPSYSD 227
>SPBPB2B2.10c |||galactose-1-phosphate uridylyltransferase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 369
Score = 24.2 bits (50), Expect = 9.1
Identities = 9/22 (40%), Positives = 15/22 (68%)
Frame = +2
Query: 293 SSEKFTAGKEVHQRWRPIRDSY 358
+S+KF + H+R+ P+ DSY
Sbjct: 2 TSKKFDFTEYSHRRYNPLTDSY 23
>SPBC28F2.11 |||INO80 complex subunit |Schizosaccharomyces pombe|chr
2|||Manual
Length = 310
Score = 24.2 bits (50), Expect = 9.1
Identities = 14/53 (26%), Positives = 24/53 (45%), Gaps = 2/53 (3%)
Frame = +2
Query: 284 SLG--SSEKFTAGKEVHQRWRPIRDSYTKTYRQGKCVLPEQLSTEQSPLPVSQ 436
SLG S++ K +H++W + + KTY + L E E + S+
Sbjct: 138 SLGEKSNDVKEVNKAMHEKWGSLSEDDRKTYEEEASKLREAYEEEMAAYNASK 190
>SPCC1183.01 |sec15|SPCC1672.13|exocyst complex subunit Sec15
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 785
Score = 24.2 bits (50), Expect = 9.1
Identities = 10/34 (29%), Positives = 17/34 (50%)
Frame = +2
Query: 209 PNYGDRAEKTRCWEEVCESVVPSWTSLGSSEKFT 310
PN+ E W +CE +V + S+ +E+ T
Sbjct: 333 PNFRSYEEVQNIWTIICEKLVETILSVAFTEQST 366
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,526,895
Number of Sequences: 5004
Number of extensions: 25351
Number of successful extensions: 86
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 85
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 86
length of database: 2,362,478
effective HSP length: 67
effective length of database: 2,027,210
effective search space used: 162176800
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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