Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0013_I12
(493 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z46242-8|CAA86329.1| 301|Caenorhabditis elegans Hypothetical pr... 66 1e-11
U53340-6|AAA96210.1| 305|Caenorhabditis elegans Atp synthase b ... 64 4e-11
AF039720-11|AAK68359.1| 260|Caenorhabditis elegans Hypothetical... 30 1.0
Z78198-12|CAJ85750.1| 205|Caenorhabditis elegans Hypothetical p... 29 2.4
AC024201-18|AAF36026.1| 430|Caenorhabditis elegans Hypothetical... 27 5.6
Z54237-10|CAJ43909.1| 684|Caenorhabditis elegans Hypothetical p... 27 7.4
Z54237-9|CAA90991.1| 1424|Caenorhabditis elegans Hypothetical pr... 27 7.4
Z54237-8|CAE52902.1| 771|Caenorhabditis elegans Hypothetical pr... 27 7.4
Z54237-7|CAB54312.2| 645|Caenorhabditis elegans Hypothetical pr... 27 7.4
Z54237-6|CAE52903.1| 425|Caenorhabditis elegans Hypothetical pr... 27 7.4
Z54235-13|CAJ43902.1| 684|Caenorhabditis elegans Hypothetical p... 27 7.4
Z54235-11|CAA90978.1| 1424|Caenorhabditis elegans Hypothetical p... 27 7.4
Z54235-10|CAE52905.1| 771|Caenorhabditis elegans Hypothetical p... 27 7.4
Z54235-9|CAB54190.2| 645|Caenorhabditis elegans Hypothetical pr... 27 7.4
Z54235-8|CAE52906.1| 425|Caenorhabditis elegans Hypothetical pr... 27 7.4
Z69385-3|CAA93426.2| 1477|Caenorhabditis elegans Hypothetical pr... 27 9.8
Z29117-1|CAA82376.1| 659|Caenorhabditis elegans Hypothetical pr... 27 9.8
U80838-2|AAL02517.1| 297|Caenorhabditis elegans Abnormal cell l... 27 9.8
U80838-1|AAU05570.1| 597|Caenorhabditis elegans Abnormal cell l... 27 9.8
AL117204-38|CAL49444.1| 982|Caenorhabditis elegans Hypothetical... 27 9.8
>Z46242-8|CAA86329.1| 301|Caenorhabditis elegans Hypothetical
protein F35G12.10 protein.
Length = 301
Score = 66.1 bits (154), Expect = 1e-11
Identities = 31/91 (34%), Positives = 50/91 (54%)
Frame = +2
Query: 164 RDEKNFPRPVRLTEPGKVRLGFIPEEWFQFFHSKTGVTGPYTFGVGLTTYLFSKEIYVME 343
RD N+P P R P K RL +P+ WF F TG +GPY F GL +L +KE++V E
Sbjct: 88 RDLTNYPYPSRPMYPPKTRLLMMPDSWFTAFQKVTGTSGPYLFFGGLFAFLVNKELWVFE 147
Query: 344 HEYYTGLSLLVMVIFATKKFGPQLSAWLDKE 436
+ + + ++ + ++ G ++ A L K+
Sbjct: 148 EQGHMTVGWILFYLLVSRTAGYKIDAGLYKD 178
>U53340-6|AAA96210.1| 305|Caenorhabditis elegans Atp synthase b
homolog protein 2 protein.
Length = 305
Score = 64.5 bits (150), Expect = 4e-11
Identities = 31/88 (35%), Positives = 48/88 (54%)
Frame = +2
Query: 164 RDEKNFPRPVRLTEPGKVRLGFIPEEWFQFFHSKTGVTGPYTFGVGLTTYLFSKEIYVME 343
RD N+P P R P K RL +P+ WF F TGV+GPY F GL +L +KE++V E
Sbjct: 90 RDLVNYPYPARPMYPPKSRLLMMPDSWFTPFQKVTGVSGPYLFFGGLFAFLVNKELWVFE 149
Query: 344 HEYYTGLSLLVMVIFATKKFGPQLSAWL 427
+ + + ++ + T+ G ++ L
Sbjct: 150 EQGHMTVGWILFYLLVTRTAGYKIDQGL 177
>AF039720-11|AAK68359.1| 260|Caenorhabditis elegans Hypothetical
protein F33D11.12 protein.
Length = 260
Score = 29.9 bits (64), Expect = 1.0
Identities = 10/18 (55%), Positives = 11/18 (61%)
Frame = -3
Query: 149 LWWSFWQ*VLCTGTVWPQ 96
L+W WQ VLC G W Q
Sbjct: 144 LYWGVWQFVLCVGAEWQQ 161
>Z78198-12|CAJ85750.1| 205|Caenorhabditis elegans Hypothetical
protein F55C5.11 protein.
Length = 205
Score = 28.7 bits (61), Expect = 2.4
Identities = 12/21 (57%), Positives = 15/21 (71%)
Frame = -2
Query: 243 HSSGMNPSLTLPGSVSLTGLG 181
HSS NP L +P S++LTG G
Sbjct: 155 HSSNNNPKLHMPESLTLTGSG 175
>AC024201-18|AAF36026.1| 430|Caenorhabditis elegans Hypothetical
protein Y71F9B.14 protein.
Length = 430
Score = 27.5 bits (58), Expect = 5.6
Identities = 11/19 (57%), Positives = 12/19 (63%)
Frame = +2
Query: 305 TTYLFSKEIYVMEHEYYTG 361
TT LF K+IY EYY G
Sbjct: 50 TTVLFKKDIYTSTTEYYNG 68
>Z54237-10|CAJ43909.1| 684|Caenorhabditis elegans Hypothetical
protein T11B7.4e protein.
Length = 684
Score = 27.1 bits (57), Expect = 7.4
Identities = 16/54 (29%), Positives = 22/54 (40%)
Frame = -2
Query: 255 KNWNHSSGMNPSLTLPGSVSLTGLGKFFSSRTPATSVVELLAISAVYGDCLAAA 94
K H S TL + +GL F P V+ A ++GDCL+ A
Sbjct: 194 KEQEHGSAGGAGTTLSNHPNPSGLPVCFMCTRPILGVMARAAGKNLHGDCLSCA 247
>Z54237-9|CAA90991.1| 1424|Caenorhabditis elegans Hypothetical
protein T11B7.4d protein.
Length = 1424
Score = 27.1 bits (57), Expect = 7.4
Identities = 16/54 (29%), Positives = 22/54 (40%)
Frame = -2
Query: 255 KNWNHSSGMNPSLTLPGSVSLTGLGKFFSSRTPATSVVELLAISAVYGDCLAAA 94
K H S TL + +GL F P V+ A ++GDCL+ A
Sbjct: 194 KEQEHGSAGGAGTTLSNHPNPSGLPVCFMCTRPILGVMARAAGKNLHGDCLSCA 247
>Z54237-8|CAE52902.1| 771|Caenorhabditis elegans Hypothetical
protein T11B7.4c protein.
Length = 771
Score = 27.1 bits (57), Expect = 7.4
Identities = 16/54 (29%), Positives = 22/54 (40%)
Frame = -2
Query: 255 KNWNHSSGMNPSLTLPGSVSLTGLGKFFSSRTPATSVVELLAISAVYGDCLAAA 94
K H S TL + +GL F P V+ A ++GDCL+ A
Sbjct: 123 KEQEHGSAGGAGTTLSNHPNPSGLPVCFMCTRPILGVMARAAGKNLHGDCLSCA 176
>Z54237-7|CAB54312.2| 645|Caenorhabditis elegans Hypothetical
protein T11B7.4b protein.
Length = 645
Score = 27.1 bits (57), Expect = 7.4
Identities = 16/54 (29%), Positives = 22/54 (40%)
Frame = -2
Query: 255 KNWNHSSGMNPSLTLPGSVSLTGLGKFFSSRTPATSVVELLAISAVYGDCLAAA 94
K H S TL + +GL F P V+ A ++GDCL+ A
Sbjct: 194 KEQEHGSAGGAGTTLSNHPNPSGLPVCFMCTRPILGVMARAAGKNLHGDCLSCA 247
>Z54237-6|CAE52903.1| 425|Caenorhabditis elegans Hypothetical
protein T11B7.4a protein.
Length = 425
Score = 27.1 bits (57), Expect = 7.4
Identities = 16/54 (29%), Positives = 22/54 (40%)
Frame = -2
Query: 255 KNWNHSSGMNPSLTLPGSVSLTGLGKFFSSRTPATSVVELLAISAVYGDCLAAA 94
K H S TL + +GL F P V+ A ++GDCL+ A
Sbjct: 194 KEQEHGSAGGAGTTLSNHPNPSGLPVCFMCTRPILGVMARAAGKNLHGDCLSCA 247
>Z54235-13|CAJ43902.1| 684|Caenorhabditis elegans Hypothetical
protein T11B7.4e protein.
Length = 684
Score = 27.1 bits (57), Expect = 7.4
Identities = 16/54 (29%), Positives = 22/54 (40%)
Frame = -2
Query: 255 KNWNHSSGMNPSLTLPGSVSLTGLGKFFSSRTPATSVVELLAISAVYGDCLAAA 94
K H S TL + +GL F P V+ A ++GDCL+ A
Sbjct: 194 KEQEHGSAGGAGTTLSNHPNPSGLPVCFMCTRPILGVMARAAGKNLHGDCLSCA 247
>Z54235-11|CAA90978.1| 1424|Caenorhabditis elegans Hypothetical
protein T11B7.4d protein.
Length = 1424
Score = 27.1 bits (57), Expect = 7.4
Identities = 16/54 (29%), Positives = 22/54 (40%)
Frame = -2
Query: 255 KNWNHSSGMNPSLTLPGSVSLTGLGKFFSSRTPATSVVELLAISAVYGDCLAAA 94
K H S TL + +GL F P V+ A ++GDCL+ A
Sbjct: 194 KEQEHGSAGGAGTTLSNHPNPSGLPVCFMCTRPILGVMARAAGKNLHGDCLSCA 247
>Z54235-10|CAE52905.1| 771|Caenorhabditis elegans Hypothetical
protein T11B7.4c protein.
Length = 771
Score = 27.1 bits (57), Expect = 7.4
Identities = 16/54 (29%), Positives = 22/54 (40%)
Frame = -2
Query: 255 KNWNHSSGMNPSLTLPGSVSLTGLGKFFSSRTPATSVVELLAISAVYGDCLAAA 94
K H S TL + +GL F P V+ A ++GDCL+ A
Sbjct: 123 KEQEHGSAGGAGTTLSNHPNPSGLPVCFMCTRPILGVMARAAGKNLHGDCLSCA 176
>Z54235-9|CAB54190.2| 645|Caenorhabditis elegans Hypothetical
protein T11B7.4b protein.
Length = 645
Score = 27.1 bits (57), Expect = 7.4
Identities = 16/54 (29%), Positives = 22/54 (40%)
Frame = -2
Query: 255 KNWNHSSGMNPSLTLPGSVSLTGLGKFFSSRTPATSVVELLAISAVYGDCLAAA 94
K H S TL + +GL F P V+ A ++GDCL+ A
Sbjct: 194 KEQEHGSAGGAGTTLSNHPNPSGLPVCFMCTRPILGVMARAAGKNLHGDCLSCA 247
>Z54235-8|CAE52906.1| 425|Caenorhabditis elegans Hypothetical
protein T11B7.4a protein.
Length = 425
Score = 27.1 bits (57), Expect = 7.4
Identities = 16/54 (29%), Positives = 22/54 (40%)
Frame = -2
Query: 255 KNWNHSSGMNPSLTLPGSVSLTGLGKFFSSRTPATSVVELLAISAVYGDCLAAA 94
K H S TL + +GL F P V+ A ++GDCL+ A
Sbjct: 194 KEQEHGSAGGAGTTLSNHPNPSGLPVCFMCTRPILGVMARAAGKNLHGDCLSCA 247
>Z69385-3|CAA93426.2| 1477|Caenorhabditis elegans Hypothetical
protein ZK593.4 protein.
Length = 1477
Score = 26.6 bits (56), Expect = 9.8
Identities = 6/17 (35%), Positives = 11/17 (64%)
Frame = +1
Query: 355 HWSFIARYGHFRHQEVW 405
HW++ Y HF +++W
Sbjct: 518 HWTYSVNYNHFGERKIW 534
>Z29117-1|CAA82376.1| 659|Caenorhabditis elegans Hypothetical
protein C48B4.1 protein.
Length = 659
Score = 26.6 bits (56), Expect = 9.8
Identities = 15/58 (25%), Positives = 25/58 (43%), Gaps = 4/58 (6%)
Frame = +2
Query: 230 IPEEWFQFFHSKTGVTGPYTFG----VGLTTYLFSKEIYVMEHEYYTGLSLLVMVIFA 391
IP HSK G YT VG TT L+ + + YY +++ + + ++
Sbjct: 259 IPRRNMLMKHSKVSKEGLYTAPSHPKVGYTTMLYMRSEMIYHQAYYLAMAMAISIRYS 316
>U80838-2|AAL02517.1| 297|Caenorhabditis elegans Abnormal cell
lineage protein 42,isoform a protein.
Length = 297
Score = 26.6 bits (56), Expect = 9.8
Identities = 15/53 (28%), Positives = 26/53 (49%)
Frame = +2
Query: 47 VVNLRIKMLSRVALRSAAAKQSPYTALIARSSTTDVAGVRDEKNFPRPVRLTE 205
VVN + +VA+ +AAA Q+ A++A + VA + P+ T+
Sbjct: 54 VVNSTAQQQQKVAVAAAAAAQAAQAAVVATAQIRKVASAPPTTSTDPPLSYTQ 106
>U80838-1|AAU05570.1| 597|Caenorhabditis elegans Abnormal cell
lineage protein 42,isoform b protein.
Length = 597
Score = 26.6 bits (56), Expect = 9.8
Identities = 15/53 (28%), Positives = 26/53 (49%)
Frame = +2
Query: 47 VVNLRIKMLSRVALRSAAAKQSPYTALIARSSTTDVAGVRDEKNFPRPVRLTE 205
VVN + +VA+ +AAA Q+ A++A + VA + P+ T+
Sbjct: 354 VVNSTAQQQQKVAVAAAAAAQAAQAAVVATAQIRKVASAPPTTSTDPPLSYTQ 406
>AL117204-38|CAL49444.1| 982|Caenorhabditis elegans Hypothetical
protein Y116A8C.16c protein.
Length = 982
Score = 26.6 bits (56), Expect = 9.8
Identities = 15/34 (44%), Positives = 20/34 (58%)
Frame = -2
Query: 231 MNPSLTLPGSVSLTGLGKFFSSRTPATSVVELLA 130
++PS +LPG V + K SS T V+ELLA
Sbjct: 158 IHPSASLPGRVGKSSFLKKKSSSTQEDVVLELLA 191
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,207,084
Number of Sequences: 27780
Number of extensions: 254744
Number of successful extensions: 775
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 736
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 775
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 924715866
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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