Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0013_I10
         (522 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z69980-1|CAA93820.1|  134|Anopheles gambiae GTP-binding protein ...    25   2.0  
AF387862-2|AAL56548.1|  942|Anopheles gambiae pol polyprotein pr...    23   6.2  
AY705402-1|AAU12511.1|  509|Anopheles gambiae nicotinic acetylch...    23   8.2  
AY705401-1|AAU12510.1|  490|Anopheles gambiae nicotinic acetylch...    23   8.2  
AY705400-1|AAU12509.1|  490|Anopheles gambiae nicotinic acetylch...    23   8.2  
AY705399-1|AAU12508.1|  533|Anopheles gambiae nicotinic acetylch...    23   8.2  

>Z69980-1|CAA93820.1|  134|Anopheles gambiae GTP-binding protein
           protein.
          Length = 134

 Score = 24.6 bits (51), Expect = 2.0
 Identities = 10/24 (41%), Positives = 13/24 (54%)
 Frame = -3

Query: 262 KENWVPLTLHHLKTTEHIGMGLLI 191
           KE WVP   HH + T  + +G  I
Sbjct: 37  KEKWVPEITHHCQKTPFLLVGTQI 60


>AF387862-2|AAL56548.1|  942|Anopheles gambiae pol polyprotein
           protein.
          Length = 942

 Score = 23.0 bits (47), Expect = 6.2
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = -3

Query: 400 PMDLEYPKIYLKKAIVLPKMPNIKS 326
           PMD  YPKI  K+   +P+  + +S
Sbjct: 699 PMDPGYPKIQQKEEKPMPRNDDFQS 723


>AY705402-1|AAU12511.1|  509|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 7 protein.
          Length = 509

 Score = 22.6 bits (46), Expect = 8.2
 Identities = 7/9 (77%), Positives = 8/9 (88%)
 Frame = +1

Query: 460 NNGDCLYLP 486
           NNG CLY+P
Sbjct: 115 NNGSCLYVP 123


>AY705401-1|AAU12510.1|  490|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 6 protein.
          Length = 490

 Score = 22.6 bits (46), Expect = 8.2
 Identities = 7/9 (77%), Positives = 8/9 (88%)
 Frame = +1

Query: 460 NNGDCLYLP 486
           NNG CLY+P
Sbjct: 132 NNGSCLYVP 140


>AY705400-1|AAU12509.1|  490|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 6 protein.
          Length = 490

 Score = 22.6 bits (46), Expect = 8.2
 Identities = 7/9 (77%), Positives = 8/9 (88%)
 Frame = +1

Query: 460 NNGDCLYLP 486
           NNG CLY+P
Sbjct: 132 NNGSCLYVP 140


>AY705399-1|AAU12508.1|  533|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 5 protein.
          Length = 533

 Score = 22.6 bits (46), Expect = 8.2
 Identities = 7/9 (77%), Positives = 8/9 (88%)
 Frame = +1

Query: 460 NNGDCLYLP 486
           NNG CLY+P
Sbjct: 147 NNGSCLYVP 155


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 499,623
Number of Sequences: 2352
Number of extensions: 9581
Number of successful extensions: 12
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 47783067
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)