Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0013_I07
(409 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L38941-1|AAC41916.1| 117|Homo sapiens ribosomal protein L34 pro... 126 2e-29
CR542242-1|CAG47038.1| 117|Homo sapiens RPL34 protein. 122 5e-28
CR542232-1|CAG47028.1| 117|Homo sapiens RPL34 protein. 122 5e-28
BC106009-1|AAI06010.1| 117|Homo sapiens ribosomal protein L34 p... 122 5e-28
BC070208-1|AAH70208.1| 117|Homo sapiens ribosomal protein L34 p... 122 5e-28
BC001773-1|AAH01773.1| 117|Homo sapiens ribosomal protein L34 p... 122 5e-28
AB061832-1|BAB79470.1| 117|Homo sapiens ribosomal protein L34 p... 122 5e-28
AB007181-1|BAA25840.1| 45|Homo sapiens ribosomal protein L34 p... 58 1e-08
BC113377-1|AAI13378.1| 1043|Homo sapiens F-box protein, helicase... 29 6.0
BC113375-1|AAI13376.1| 1043|Homo sapiens F-box protein, helicase... 29 6.0
BC110884-1|AAI10885.1| 969|Homo sapiens FBXO18 protein protein. 29 6.0
BC080629-1|AAH80629.1| 978|Homo sapiens FBXO18 protein protein. 29 6.0
BC032674-1|AAH32674.2| 908|Homo sapiens FBXO18 protein protein. 29 6.0
BC012762-1|AAH12762.2| 338|Homo sapiens FBXO18 protein protein. 29 6.0
AL137186-6|CAI41074.1| 1094|Homo sapiens F-box protein, helicase... 29 6.0
AL137186-5|CAI41073.1| 1043|Homo sapiens F-box protein, helicase... 29 6.0
AL133069-1|CAB61392.1| 281|Homo sapiens hypothetical protein pr... 29 6.0
AK095343-1|BAC04535.1| 1043|Homo sapiens protein ( Homo sapiens ... 29 6.0
AK027496-1|BAB55154.1| 779|Homo sapiens protein ( Homo sapiens ... 29 6.0
AK027381-1|BAB55073.1| 455|Homo sapiens protein ( Homo sapiens ... 29 6.0
AF456237-1|AAP97705.1| 1043|Homo sapiens testis protein protein. 29 6.0
AF454502-1|AAP97700.1| 1042|Homo sapiens hypothetical protein pr... 29 6.0
AF380349-1|AAM73631.1| 969|Homo sapiens F-box DNA helicase 1 pr... 29 6.0
>L38941-1|AAC41916.1| 117|Homo sapiens ribosomal protein L34
protein.
Length = 117
Score = 126 bits (305), Expect = 2e-29
Identities = 64/103 (62%), Positives = 73/103 (70%), Gaps = 3/103 (2%)
Frame = +2
Query: 11 LTFRRRLSYNTKSNQRRIVRTPGGRLVYQYVKKPKKIPR--CGQCKSKLRGIQPARPAER 184
LT+RRRLSYNT SN+ R+ RTPG R+VY Y KK K P+ CG C KLRG++P RP
Sbjct: 5 LTYRRRLSYNTASNKTRLSRTPGNRIVYLYTKKVGKAPKSACGVCPGKLRGVRPVRPKVL 64
Query: 185 SRLCYRKKTVKRVYGGVLCHKCVKQRIVRAFLIEEQK-IVKVL 310
RL KK V R YGG +C KCV+ RI RAFLIEEQK IVKVL
Sbjct: 65 MRLSKTKKHVSRAYGGSMCAKCVRDRIKRAFLIEEQKIIVKVL 107
>CR542242-1|CAG47038.1| 117|Homo sapiens RPL34 protein.
Length = 117
Score = 122 bits (294), Expect = 5e-28
Identities = 62/103 (60%), Positives = 72/103 (69%), Gaps = 3/103 (2%)
Frame = +2
Query: 11 LTFRRRLSYNTKSNQRRIVRTPGGRLVYQYVKKPKKIPR--CGQCKSKLRGIQPARPAER 184
LT+RRRLSYNT SN+ R+ RTPG R+VY Y KK K P+ CG C +LRG++ RP
Sbjct: 5 LTYRRRLSYNTASNKTRLSRTPGNRIVYLYTKKVGKAPKSACGVCPGRLRGVRAVRPKVL 64
Query: 185 SRLCYRKKTVKRVYGGVLCHKCVKQRIVRAFLIEEQKI-VKVL 310
RL KK V R YGG +C KCV+ RI RAFLIEEQKI VKVL
Sbjct: 65 MRLSKTKKHVSRAYGGSMCAKCVRDRIKRAFLIEEQKIVVKVL 107
>CR542232-1|CAG47028.1| 117|Homo sapiens RPL34 protein.
Length = 117
Score = 122 bits (294), Expect = 5e-28
Identities = 62/103 (60%), Positives = 72/103 (69%), Gaps = 3/103 (2%)
Frame = +2
Query: 11 LTFRRRLSYNTKSNQRRIVRTPGGRLVYQYVKKPKKIPR--CGQCKSKLRGIQPARPAER 184
LT+RRRLSYNT SN+ R+ RTPG R+VY Y KK K P+ CG C +LRG++ RP
Sbjct: 5 LTYRRRLSYNTASNKTRLSRTPGNRIVYLYTKKVGKAPKSACGVCPGRLRGVRAVRPKVL 64
Query: 185 SRLCYRKKTVKRVYGGVLCHKCVKQRIVRAFLIEEQKI-VKVL 310
RL KK V R YGG +C KCV+ RI RAFLIEEQKI VKVL
Sbjct: 65 MRLSKTKKHVSRAYGGSMCAKCVRDRIKRAFLIEEQKIVVKVL 107
>BC106009-1|AAI06010.1| 117|Homo sapiens ribosomal protein L34
protein.
Length = 117
Score = 122 bits (294), Expect = 5e-28
Identities = 62/103 (60%), Positives = 72/103 (69%), Gaps = 3/103 (2%)
Frame = +2
Query: 11 LTFRRRLSYNTKSNQRRIVRTPGGRLVYQYVKKPKKIPR--CGQCKSKLRGIQPARPAER 184
LT+RRRLSYNT SN+ R+ RTPG R+VY Y KK K P+ CG C +LRG++ RP
Sbjct: 5 LTYRRRLSYNTASNKTRLSRTPGNRIVYLYTKKVGKAPKSACGVCPGRLRGVRAVRPKVL 64
Query: 185 SRLCYRKKTVKRVYGGVLCHKCVKQRIVRAFLIEEQKI-VKVL 310
RL KK V R YGG +C KCV+ RI RAFLIEEQKI VKVL
Sbjct: 65 MRLSKTKKHVSRAYGGSMCAKCVRDRIKRAFLIEEQKIVVKVL 107
>BC070208-1|AAH70208.1| 117|Homo sapiens ribosomal protein L34
protein.
Length = 117
Score = 122 bits (294), Expect = 5e-28
Identities = 62/103 (60%), Positives = 72/103 (69%), Gaps = 3/103 (2%)
Frame = +2
Query: 11 LTFRRRLSYNTKSNQRRIVRTPGGRLVYQYVKKPKKIPR--CGQCKSKLRGIQPARPAER 184
LT+RRRLSYNT SN+ R+ RTPG R+VY Y KK K P+ CG C +LRG++ RP
Sbjct: 5 LTYRRRLSYNTASNKTRLSRTPGNRIVYLYTKKVGKAPKSACGVCPGRLRGVRAVRPKVL 64
Query: 185 SRLCYRKKTVKRVYGGVLCHKCVKQRIVRAFLIEEQKI-VKVL 310
RL KK V R YGG +C KCV+ RI RAFLIEEQKI VKVL
Sbjct: 65 MRLSKTKKHVSRAYGGSMCAKCVRDRIKRAFLIEEQKIVVKVL 107
>BC001773-1|AAH01773.1| 117|Homo sapiens ribosomal protein L34
protein.
Length = 117
Score = 122 bits (294), Expect = 5e-28
Identities = 62/103 (60%), Positives = 72/103 (69%), Gaps = 3/103 (2%)
Frame = +2
Query: 11 LTFRRRLSYNTKSNQRRIVRTPGGRLVYQYVKKPKKIPR--CGQCKSKLRGIQPARPAER 184
LT+RRRLSYNT SN+ R+ RTPG R+VY Y KK K P+ CG C +LRG++ RP
Sbjct: 5 LTYRRRLSYNTASNKTRLSRTPGNRIVYLYTKKVGKAPKSACGVCPGRLRGVRAVRPKVL 64
Query: 185 SRLCYRKKTVKRVYGGVLCHKCVKQRIVRAFLIEEQKI-VKVL 310
RL KK V R YGG +C KCV+ RI RAFLIEEQKI VKVL
Sbjct: 65 MRLSKTKKHVSRAYGGSMCAKCVRDRIKRAFLIEEQKIVVKVL 107
>AB061832-1|BAB79470.1| 117|Homo sapiens ribosomal protein L34
protein.
Length = 117
Score = 122 bits (294), Expect = 5e-28
Identities = 62/103 (60%), Positives = 72/103 (69%), Gaps = 3/103 (2%)
Frame = +2
Query: 11 LTFRRRLSYNTKSNQRRIVRTPGGRLVYQYVKKPKKIPR--CGQCKSKLRGIQPARPAER 184
LT+RRRLSYNT SN+ R+ RTPG R+VY Y KK K P+ CG C +LRG++ RP
Sbjct: 5 LTYRRRLSYNTASNKTRLSRTPGNRIVYLYTKKVGKAPKSACGVCPGRLRGVRAVRPKVL 64
Query: 185 SRLCYRKKTVKRVYGGVLCHKCVKQRIVRAFLIEEQKI-VKVL 310
RL KK V R YGG +C KCV+ RI RAFLIEEQKI VKVL
Sbjct: 65 MRLSKTKKHVSRAYGGSMCAKCVRDRIKRAFLIEEQKIVVKVL 107
>AB007181-1|BAA25840.1| 45|Homo sapiens ribosomal protein L34
protein.
Length = 45
Score = 58.0 bits (134), Expect = 1e-08
Identities = 27/43 (62%), Positives = 32/43 (74%), Gaps = 2/43 (4%)
Frame = +2
Query: 11 LTFRRRLSYNTKSNQRRIVRTPGGRLVYQYVKKPKKIPR--CG 133
LT+RRRLSYNT SN+ R+ RTPG R+VY Y KK K P+ CG
Sbjct: 2 LTYRRRLSYNTASNKTRLSRTPGNRIVYLYTKKVGKAPKSACG 44
>BC113377-1|AAI13378.1| 1043|Homo sapiens F-box protein, helicase, 18
protein.
Length = 1043
Score = 29.1 bits (62), Expect = 6.0
Identities = 20/67 (29%), Positives = 32/67 (47%), Gaps = 3/67 (4%)
Frame = +2
Query: 119 IPRC--GQCKSKLRGIQPARPAERSRLCYRKKTVKRVYGGVLCHKCVKQRI-VRAFLIEE 289
+ RC GQC + + + ++ + Y + K GG LCH C +QRI AFL
Sbjct: 960 VVRCCVGQCNNAIP-VDTVLTMKKLPITYSNR--KENKGGYLCHSCAEQRIGPLAFLTAS 1016
Query: 290 QKIVKVL 310
+ V+ +
Sbjct: 1017 PEQVRAM 1023
>BC113375-1|AAI13376.1| 1043|Homo sapiens F-box protein, helicase, 18
protein.
Length = 1043
Score = 29.1 bits (62), Expect = 6.0
Identities = 20/67 (29%), Positives = 32/67 (47%), Gaps = 3/67 (4%)
Frame = +2
Query: 119 IPRC--GQCKSKLRGIQPARPAERSRLCYRKKTVKRVYGGVLCHKCVKQRI-VRAFLIEE 289
+ RC GQC + + + ++ + Y + K GG LCH C +QRI AFL
Sbjct: 960 VVRCCVGQCNNAIP-VDTVLTMKKLPITYSNR--KENKGGYLCHSCAEQRIGPLAFLTAS 1016
Query: 290 QKIVKVL 310
+ V+ +
Sbjct: 1017 PEQVRAM 1023
>BC110884-1|AAI10885.1| 969|Homo sapiens FBXO18 protein protein.
Length = 969
Score = 29.1 bits (62), Expect = 6.0
Identities = 20/67 (29%), Positives = 32/67 (47%), Gaps = 3/67 (4%)
Frame = +2
Query: 119 IPRC--GQCKSKLRGIQPARPAERSRLCYRKKTVKRVYGGVLCHKCVKQRI-VRAFLIEE 289
+ RC GQC + + + ++ + Y + K GG LCH C +QRI AFL
Sbjct: 886 VVRCCVGQCNNAIP-VDTVLTMKKLPITYSNR--KENKGGYLCHSCAEQRIGPLAFLTAS 942
Query: 290 QKIVKVL 310
+ V+ +
Sbjct: 943 PEQVRAM 949
>BC080629-1|AAH80629.1| 978|Homo sapiens FBXO18 protein protein.
Length = 978
Score = 29.1 bits (62), Expect = 6.0
Identities = 20/67 (29%), Positives = 32/67 (47%), Gaps = 3/67 (4%)
Frame = +2
Query: 119 IPRC--GQCKSKLRGIQPARPAERSRLCYRKKTVKRVYGGVLCHKCVKQRI-VRAFLIEE 289
+ RC GQC + + + ++ + Y + K GG LCH C +QRI AFL
Sbjct: 895 VVRCCVGQCNNAIP-VDTVLTMKKLPITYSNR--KENKGGYLCHSCAEQRIGPLAFLTAS 951
Query: 290 QKIVKVL 310
+ V+ +
Sbjct: 952 PEQVRAM 958
>BC032674-1|AAH32674.2| 908|Homo sapiens FBXO18 protein protein.
Length = 908
Score = 29.1 bits (62), Expect = 6.0
Identities = 20/67 (29%), Positives = 32/67 (47%), Gaps = 3/67 (4%)
Frame = +2
Query: 119 IPRC--GQCKSKLRGIQPARPAERSRLCYRKKTVKRVYGGVLCHKCVKQRI-VRAFLIEE 289
+ RC GQC + + + ++ + Y + K GG LCH C +QRI AFL
Sbjct: 825 VVRCCVGQCNNAIP-VDTVLTMKKLPITYSNR--KENKGGYLCHSCAEQRIGPLAFLTAS 881
Query: 290 QKIVKVL 310
+ V+ +
Sbjct: 882 PEQVRAM 888
>BC012762-1|AAH12762.2| 338|Homo sapiens FBXO18 protein protein.
Length = 338
Score = 29.1 bits (62), Expect = 6.0
Identities = 20/67 (29%), Positives = 32/67 (47%), Gaps = 3/67 (4%)
Frame = +2
Query: 119 IPRC--GQCKSKLRGIQPARPAERSRLCYRKKTVKRVYGGVLCHKCVKQRI-VRAFLIEE 289
+ RC GQC + + + ++ + Y + K GG LCH C +QRI AFL
Sbjct: 255 VVRCCVGQCNNAIP-VDTVLTMKKLPITYSNR--KENKGGYLCHSCAEQRIGPLAFLTAS 311
Query: 290 QKIVKVL 310
+ V+ +
Sbjct: 312 PEQVRAM 318
>AL137186-6|CAI41074.1| 1094|Homo sapiens F-box protein, helicase, 18
protein.
Length = 1094
Score = 29.1 bits (62), Expect = 6.0
Identities = 20/67 (29%), Positives = 32/67 (47%), Gaps = 3/67 (4%)
Frame = +2
Query: 119 IPRC--GQCKSKLRGIQPARPAERSRLCYRKKTVKRVYGGVLCHKCVKQRI-VRAFLIEE 289
+ RC GQC + + + ++ + Y + K GG LCH C +QRI AFL
Sbjct: 1011 VVRCCVGQCNNAIP-VDTVLTMKKLPITYSNR--KENKGGYLCHSCAEQRIGPLAFLTAS 1067
Query: 290 QKIVKVL 310
+ V+ +
Sbjct: 1068 PEQVRAM 1074
>AL137186-5|CAI41073.1| 1043|Homo sapiens F-box protein, helicase, 18
protein.
Length = 1043
Score = 29.1 bits (62), Expect = 6.0
Identities = 20/67 (29%), Positives = 32/67 (47%), Gaps = 3/67 (4%)
Frame = +2
Query: 119 IPRC--GQCKSKLRGIQPARPAERSRLCYRKKTVKRVYGGVLCHKCVKQRI-VRAFLIEE 289
+ RC GQC + + + ++ + Y + K GG LCH C +QRI AFL
Sbjct: 960 VVRCCVGQCNNAIP-VDTVLTMKKLPITYSNR--KENKGGYLCHSCAEQRIGPLAFLTAS 1016
Query: 290 QKIVKVL 310
+ V+ +
Sbjct: 1017 PEQVRAM 1023
>AL133069-1|CAB61392.1| 281|Homo sapiens hypothetical protein
protein.
Length = 281
Score = 29.1 bits (62), Expect = 6.0
Identities = 20/67 (29%), Positives = 32/67 (47%), Gaps = 3/67 (4%)
Frame = +2
Query: 119 IPRC--GQCKSKLRGIQPARPAERSRLCYRKKTVKRVYGGVLCHKCVKQRI-VRAFLIEE 289
+ RC GQC + + + ++ + Y + K GG LCH C +QRI AFL
Sbjct: 198 VVRCCVGQCNNAIP-VDTVLTMKKLPITYSNR--KENKGGYLCHSCAEQRIGPLAFLTAS 254
Query: 290 QKIVKVL 310
+ V+ +
Sbjct: 255 PEQVRAM 261
>AK095343-1|BAC04535.1| 1043|Homo sapiens protein ( Homo sapiens cDNA
FLJ38024 fis, clone CTONG2012996, highly similar to Mus
musculus F-box protein FBX18 mRNA. ).
Length = 1043
Score = 29.1 bits (62), Expect = 6.0
Identities = 20/67 (29%), Positives = 32/67 (47%), Gaps = 3/67 (4%)
Frame = +2
Query: 119 IPRC--GQCKSKLRGIQPARPAERSRLCYRKKTVKRVYGGVLCHKCVKQRI-VRAFLIEE 289
+ RC GQC + + + ++ + Y + K GG LCH C +QRI AFL
Sbjct: 960 VVRCCVGQCNNAIP-VDTVLTMKKLPITYSNR--KENKGGYLCHSCAEQRIGPLAFLTAS 1016
Query: 290 QKIVKVL 310
+ V+ +
Sbjct: 1017 PEQVRAM 1023
>AK027496-1|BAB55154.1| 779|Homo sapiens protein ( Homo sapiens
cDNA FLJ14590 fis, clone NT2RM4001880, weakly similar to
PUTATIVE DNA HELICASE II HOMOLOG (EC 3.6.1.-). ).
Length = 779
Score = 29.1 bits (62), Expect = 6.0
Identities = 20/67 (29%), Positives = 32/67 (47%), Gaps = 3/67 (4%)
Frame = +2
Query: 119 IPRC--GQCKSKLRGIQPARPAERSRLCYRKKTVKRVYGGVLCHKCVKQRI-VRAFLIEE 289
+ RC GQC + + + ++ + Y + K GG LCH C +QRI AFL
Sbjct: 696 VVRCCVGQCNNAIP-VDTVLTMKKLLITYSNR--KENKGGYLCHSCAEQRIGPLAFLTAS 752
Query: 290 QKIVKVL 310
+ V+ +
Sbjct: 753 PEQVRAM 759
>AK027381-1|BAB55073.1| 455|Homo sapiens protein ( Homo sapiens
cDNA FLJ14475 fis, clone MAMMA1001259, highly similar to
Mus musculus F-box protein FBX18 mRNA. ).
Length = 455
Score = 29.1 bits (62), Expect = 6.0
Identities = 20/67 (29%), Positives = 32/67 (47%), Gaps = 3/67 (4%)
Frame = +2
Query: 119 IPRC--GQCKSKLRGIQPARPAERSRLCYRKKTVKRVYGGVLCHKCVKQRI-VRAFLIEE 289
+ RC GQC + + + ++ + Y + K GG LCH C +QRI AFL
Sbjct: 372 VVRCCVGQCNNAIP-VDTVLTMKKLPITYSNR--KENKGGYLCHSCAEQRIGPLAFLTAS 428
Query: 290 QKIVKVL 310
+ V+ +
Sbjct: 429 PEQVRAM 435
>AF456237-1|AAP97705.1| 1043|Homo sapiens testis protein protein.
Length = 1043
Score = 29.1 bits (62), Expect = 6.0
Identities = 20/67 (29%), Positives = 32/67 (47%), Gaps = 3/67 (4%)
Frame = +2
Query: 119 IPRC--GQCKSKLRGIQPARPAERSRLCYRKKTVKRVYGGVLCHKCVKQRI-VRAFLIEE 289
+ RC GQC + + + ++ + Y + K GG LCH C +QRI AFL
Sbjct: 960 VVRCCVGQCNNAIP-VDTVLTMKKLPITYSNR--KENKGGYLCHSCAEQRIGPLAFLTAS 1016
Query: 290 QKIVKVL 310
+ V+ +
Sbjct: 1017 PEQVRAM 1023
>AF454502-1|AAP97700.1| 1042|Homo sapiens hypothetical protein
protein.
Length = 1042
Score = 29.1 bits (62), Expect = 6.0
Identities = 20/67 (29%), Positives = 32/67 (47%), Gaps = 3/67 (4%)
Frame = +2
Query: 119 IPRC--GQCKSKLRGIQPARPAERSRLCYRKKTVKRVYGGVLCHKCVKQRI-VRAFLIEE 289
+ RC GQC + + + ++ + Y + K GG LCH C +QRI AFL
Sbjct: 959 VVRCCVGQCNNAIP-VDTVLTMKKLLITYSNR--KENKGGYLCHSCAEQRIGPLAFLTAS 1015
Query: 290 QKIVKVL 310
+ V+ +
Sbjct: 1016 PEQVRAM 1022
>AF380349-1|AAM73631.1| 969|Homo sapiens F-box DNA helicase 1
protein.
Length = 969
Score = 29.1 bits (62), Expect = 6.0
Identities = 20/67 (29%), Positives = 32/67 (47%), Gaps = 3/67 (4%)
Frame = +2
Query: 119 IPRC--GQCKSKLRGIQPARPAERSRLCYRKKTVKRVYGGVLCHKCVKQRI-VRAFLIEE 289
+ RC GQC + + + ++ + Y + K GG LCH C +QRI AFL
Sbjct: 886 VVRCCVGQCNNAIP-VDTVLTMKKLPITYSNR--KENKGGYLCHSCAEQRIGPLAFLTAS 942
Query: 290 QKIVKVL 310
+ V+ +
Sbjct: 943 PEQVRAM 949
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 51,080,438
Number of Sequences: 237096
Number of extensions: 921179
Number of successful extensions: 2612
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 2531
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2605
length of database: 76,859,062
effective HSP length: 82
effective length of database: 57,417,190
effective search space used: 3043111070
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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