BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0013_I04
(601 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L04960-2|AAF01347.1| 2711|Drosophila melanogaster fat facets sho... 29 6.4
L04960-1|AAF01348.1| 2747|Drosophila melanogaster fat facets lon... 29 6.4
L04959-1|AAF01345.1| 2747|Drosophila melanogaster fat facets lon... 29 6.4
L04958-1|AAF01346.1| 2711|Drosophila melanogaster fat facets sho... 29 6.4
AF145677-1|AAD38652.1| 1689|Drosophila melanogaster BcDNA.LD2258... 29 6.4
AE014297-4810|AAN14291.1| 2711|Drosophila melanogaster CG1945-PC... 29 6.4
AE014297-4809|AAF57198.1| 2778|Drosophila melanogaster CG1945-PA... 29 6.4
>L04960-2|AAF01347.1| 2711|Drosophila melanogaster fat facets short
isoform protein.
Length = 2711
Score = 28.7 bits (61), Expect = 6.4
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = +2
Query: 293 EKKIITPKRKFVQKFPVIFCIQLFYFPF 376
+KK++T KR V+K P + IQL F +
Sbjct: 1890 DKKVVTVKRVCVKKLPPVLAIQLKRFEY 1917
>L04960-1|AAF01348.1| 2747|Drosophila melanogaster fat facets long
isoform protein.
Length = 2747
Score = 28.7 bits (61), Expect = 6.4
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = +2
Query: 293 EKKIITPKRKFVQKFPVIFCIQLFYFPF 376
+KK++T KR V+K P + IQL F +
Sbjct: 1890 DKKVVTVKRVCVKKLPPVLAIQLKRFEY 1917
>L04959-1|AAF01345.1| 2747|Drosophila melanogaster fat facets long
isoform protein.
Length = 2747
Score = 28.7 bits (61), Expect = 6.4
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = +2
Query: 293 EKKIITPKRKFVQKFPVIFCIQLFYFPF 376
+KK++T KR V+K P + IQL F +
Sbjct: 1890 DKKVVTVKRVCVKKLPPVLAIQLKRFEY 1917
>L04958-1|AAF01346.1| 2711|Drosophila melanogaster fat facets short
isoform protein.
Length = 2711
Score = 28.7 bits (61), Expect = 6.4
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = +2
Query: 293 EKKIITPKRKFVQKFPVIFCIQLFYFPF 376
+KK++T KR V+K P + IQL F +
Sbjct: 1890 DKKVVTVKRVCVKKLPPVLAIQLKRFEY 1917
>AF145677-1|AAD38652.1| 1689|Drosophila melanogaster BcDNA.LD22582
protein.
Length = 1689
Score = 28.7 bits (61), Expect = 6.4
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = +2
Query: 293 EKKIITPKRKFVQKFPVIFCIQLFYFPF 376
+KK++T KR V+K P + IQL F +
Sbjct: 801 DKKVVTVKRVCVKKLPPVLAIQLKRFEY 828
>AE014297-4810|AAN14291.1| 2711|Drosophila melanogaster CG1945-PC,
isoform C protein.
Length = 2711
Score = 28.7 bits (61), Expect = 6.4
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = +2
Query: 293 EKKIITPKRKFVQKFPVIFCIQLFYFPF 376
+KK++T KR V+K P + IQL F +
Sbjct: 1890 DKKVVTVKRVCVKKLPPVLAIQLKRFEY 1917
>AE014297-4809|AAF57198.1| 2778|Drosophila melanogaster CG1945-PA,
isoform A protein.
Length = 2778
Score = 28.7 bits (61), Expect = 6.4
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = +2
Query: 293 EKKIITPKRKFVQKFPVIFCIQLFYFPF 376
+KK++T KR V+K P + IQL F +
Sbjct: 1890 DKKVVTVKRVCVKKLPPVLAIQLKRFEY 1917
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,494,979
Number of Sequences: 53049
Number of extensions: 413452
Number of successful extensions: 909
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 887
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 909
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2441585082
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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