Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0013_I02
         (220 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U76833-1|AAC51668.1|  760|Homo sapiens integral membrane serine ...    27   8.2  
U09278-1|AAB49652.1|  760|Homo sapiens fibroblast activation pro...    27   8.2  
BC026250-1|AAH26250.1|  760|Homo sapiens fibroblast activation p...    27   8.2  
AC007750-2|AAY24205.1|  760|Homo sapiens unknown protein.              27   8.2  

>U76833-1|AAC51668.1|  760|Homo sapiens integral membrane serine
           protease Seprase protein.
          Length = 760

 Score = 27.5 bits (58), Expect = 8.2
 Identities = 13/38 (34%), Positives = 21/38 (55%)
 Frame = +1

Query: 43  TMAVRALLILAMVVCIGHVHSKSLLNLSCKQIKDFVNG 156
           T AV ALL++ +V+    VH+     +    +KD +NG
Sbjct: 13  TSAVLALLVMCIVLRPSRVHNSEENTMRALTLKDILNG 50


>U09278-1|AAB49652.1|  760|Homo sapiens fibroblast activation
           protein protein.
          Length = 760

 Score = 27.5 bits (58), Expect = 8.2
 Identities = 13/38 (34%), Positives = 21/38 (55%)
 Frame = +1

Query: 43  TMAVRALLILAMVVCIGHVHSKSLLNLSCKQIKDFVNG 156
           T AV ALL++ +V+    VH+     +    +KD +NG
Sbjct: 13  TSAVLALLVMCIVLRPSRVHNSEENTMRALTLKDILNG 50


>BC026250-1|AAH26250.1|  760|Homo sapiens fibroblast activation
           protein, alpha subunit protein.
          Length = 760

 Score = 27.5 bits (58), Expect = 8.2
 Identities = 13/38 (34%), Positives = 21/38 (55%)
 Frame = +1

Query: 43  TMAVRALLILAMVVCIGHVHSKSLLNLSCKQIKDFVNG 156
           T AV ALL++ +V+    VH+     +    +KD +NG
Sbjct: 13  TSAVLALLVMCIVLRPSRVHNSEENTMRALTLKDILNG 50


>AC007750-2|AAY24205.1|  760|Homo sapiens unknown protein.
          Length = 760

 Score = 27.5 bits (58), Expect = 8.2
 Identities = 13/38 (34%), Positives = 21/38 (55%)
 Frame = +1

Query: 43  TMAVRALLILAMVVCIGHVHSKSLLNLSCKQIKDFVNG 156
           T AV ALL++ +V+    VH+     +    +KD +NG
Sbjct: 13  TSAVLALLVMCIVLRPSRVHNSEENTMRALTLKDILNG 50


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,731,022
Number of Sequences: 237096
Number of extensions: 551245
Number of successful extensions: 1061
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1050
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1061
length of database: 76,859,062
effective HSP length: 51
effective length of database: 64,767,166
effective search space used: 1360110486
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)