Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0013_H24
(618 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC32H8.12c |act1|cps8|actin |Schizosaccharomyces pombe|chr 2||... 389 e-109
SPAC11H11.06 |arp2|SPAC22F8.01|ARP2/3 actin-organizing complex s... 221 5e-59
SPBC1347.12 |||actin-like protein Arp1 |Schizosaccharomyces pomb... 214 7e-57
SPAC630.03 |arp3|act2|actin-like protein Arp3|Schizosaccharomyce... 154 8e-39
SPBC365.10 |||actin-like protein Arp5 |Schizosaccharomyces pombe... 97 2e-21
SPBP23A10.08 |alp5|arp4|actin-like protein Arp4|Schizosaccharomy... 89 5e-19
SPAC23D3.09 |arp42|arp4|SWI/SNF and RSC complex subunit Arp42|Sc... 79 5e-16
SPCC550.12 |arp6||actin-like protein Arp6|Schizosaccharomyces po... 71 1e-13
SPAC1071.06 |arp9||SWI/SNF and RSC complex subunit Arp9|Schizosa... 69 5e-13
SPAC664.02c |||actin-like protein Arp8 |Schizosaccharomyces pomb... 38 0.002
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 35 0.011
SPAC26A3.05 |chc1||clathrin heavy chain Chc1 |Schizosaccharomyce... 32 0.076
SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr 1... 28 0.94
SPAC3F10.03 |||glycine tRNA-ligase|Schizosaccharomyces pombe|chr... 25 1.1
SPBC115.01c |rrp46||exosome subunit Rrp46 |Schizosaccharomyces p... 26 3.8
SPCC320.04c |||GTPase Gem1 |Schizosaccharomyces pombe|chr 3|||Ma... 26 3.8
SPCC18B5.03 |wee1||dual specificity protein kinase Wee1|Schizosa... 26 3.8
SPAC1834.05 |alg9||mannosyltransferase complex subunit Alg9 |Sch... 26 5.0
SPAC1F3.02c |mkh1||MEK kinase |Schizosaccharomyces pombe|chr 1||... 26 5.0
SPCC24B10.21 |tpi1|tpi|triosephosphate isomerase|Schizosaccharom... 26 5.0
SPAC26F1.04c |etr1||enoyl-[acyl-carrier protein] reductase|Schiz... 25 6.6
SPAC2E1P3.04 |||copper amine oxidase |Schizosaccharomyces pombe|... 25 8.8
SPAC16C9.03 |||export adaptor|Schizosaccharomyces pombe|chr 1|||... 25 8.8
SPAC167.01 |ppk4||serine/threonine protein kinase Ppk4 |Schizosa... 25 8.8
SPAC9G1.10c |||inositol polyphosphate phosphatase |Schizosacchar... 25 8.8
>SPBC32H8.12c |act1|cps8|actin |Schizosaccharomyces pombe|chr
2|||Manual
Length = 375
Score = 389 bits (957), Expect = e-109
Identities = 182/199 (91%), Positives = 191/199 (95%)
Frame = +2
Query: 20 EEDSYVCDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEA 199
++DSYV DEAQSKRGILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHP LLTEA
Sbjct: 49 QKDSYVGDEAQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPCLLTEA 108
Query: 200 PLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEG 379
PLNPK+NREKMTQI+FETFN PA YVAIQAVLSLYASGRTTGIVLDSGDGV+HTVPIYEG
Sbjct: 109 PLNPKSNREKMTQIIFETFNAPAFYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEG 168
Query: 380 YALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMA 559
YALPHAI+RLDLAGRDLTDYLMKIL ERGY+F+TTAEREIVRDIKEKLCYVALDFEQE+
Sbjct: 169 YALPHAIMRLDLAGRDLTDYLMKILMERGYTFSTTAEREIVRDIKEKLCYVALDFEQELQ 228
Query: 560 TAASSSSLEKSYELPDGQV 616
TAA SSSLEKSYELPDGQV
Sbjct: 229 TAAQSSSLEKSYELPDGQV 247
>SPAC11H11.06 |arp2|SPAC22F8.01|ARP2/3 actin-organizing complex
subunit Arp2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 390
Score = 221 bits (541), Expect = 5e-59
Identities = 98/198 (49%), Positives = 145/198 (73%)
Frame = +2
Query: 23 EDSYVCDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAP 202
+D V DEA++ R +L +KYP+E+GI+ ++++M ++W +TF+ +L++ P +LLTE P
Sbjct: 50 KDVMVGDEAEAVRSLLQVKYPMENGIIRDFEEMNQLWDYTFFEKLKIDPRGRKILLTEPP 109
Query: 203 LNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGY 382
+NP ANREKM + MFE + +YVAIQAVLSLYA G ++G+V+DSGDGV+H VP+YE
Sbjct: 110 MNPVANREKMCETMFERYGFGGVYVAIQAVLSLYAQGLSSGVVVDSGDGVTHIVPVYESV 169
Query: 383 ALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMAT 562
L H + RLD+AGRD T YL+ +L +GY+F TA+ E VR++KEKLCYV+ D E +
Sbjct: 170 VLNHLVGRLDVAGRDATRYLISLLLRKGYAFNRTADFETVREMKEKLCYVSYDLELDHKL 229
Query: 563 AASSSSLEKSYELPDGQV 616
+ ++ L ++Y LPDG+V
Sbjct: 230 SEETTVLMRNYTLPDGRV 247
>SPBC1347.12 |||actin-like protein Arp1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 379
Score = 214 bits (523), Expect = 7e-57
Identities = 97/199 (48%), Positives = 141/199 (70%), Gaps = 1/199 (0%)
Frame = +2
Query: 20 EEDSYVCDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNE-LRVAPEEHPVLLTE 196
++D +V EAQ+ RG+L ++ PIE GI+ NW DME+IW + + ++ L PEEHP+LLTE
Sbjct: 53 QKDMFVGSEAQNLRGLLKIQRPIERGIIQNWSDMEEIWSYIYSDQQLNTLPEEHPLLLTE 112
Query: 197 APLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYE 376
PL N+EK+ + +ET N PA+ ++Q VL+LYAS RTTGIVL+ GDG++H+VPIY+
Sbjct: 113 PPLANIRNKEKIAEYFYETLNVPALSFSLQPVLALYASARTTGIVLECGDGLTHSVPIYD 172
Query: 377 GYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEM 556
G+++P AI + ++ GRD+TDYL L + G+ ++AE+EIVR+IKEK CYVA DF E+
Sbjct: 173 GFSIPSAIQQEEIGGRDVTDYLQLQLRKSGHELVSSAEKEIVREIKEKCCYVASDFRSEI 232
Query: 557 ATAASSSSLEKSYELPDGQ 613
+ +Y+LPD Q
Sbjct: 233 ESWTEHKPQIHTYQLPDNQ 251
>SPAC630.03 |arp3|act2|actin-like protein Arp3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 427
Score = 154 bits (374), Expect = 8e-39
Identities = 82/189 (43%), Positives = 114/189 (60%), Gaps = 11/189 (5%)
Frame = +2
Query: 26 DSYVCDEAQSKRGI-LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAP 202
D ++ ++A K +L YPI HG + NWD ME+ W + + LR PE+H LLTE P
Sbjct: 73 DFFIGNDALKKASAGYSLDYPIRHGQIENWDHMERFWQQSLFKYLRCEPEDHYFLLTEPP 132
Query: 203 LNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRT--------TGIVLDSGDGVSH 358
LNP NRE +IMFE+FN +Y+A+QAVL+L AS + TG V+DSGDGV+H
Sbjct: 133 LNPPENRENTAEIMFESFNCAGLYIAVQAVLALAASWTSSKVTDRSLTGTVVDSGDGVTH 192
Query: 359 TVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGY--SFTTTAEREIVRDIKEKLCYV 532
+P+ EGY + +I + LAGRD+T ++ +L +R S TAER IKE+ CYV
Sbjct: 193 IIPVAEGYVIGSSIKTMPLAGRDVTYFVQSLLRDRNEPDSSLKTAER-----IKEECCYV 247
Query: 533 ALDFEQEMA 559
D +E +
Sbjct: 248 CPDIVKEFS 256
>SPBC365.10 |||actin-like protein Arp5 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 721
Score = 96.7 bits (230), Expect = 2e-21
Identities = 50/171 (29%), Positives = 88/171 (51%), Gaps = 2/171 (1%)
Frame = +2
Query: 83 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNT 262
P E +++NWD ME++ +TF +L + EHP+ +TE NP R MT+++FE +N
Sbjct: 86 PFERNVISNWDLMEQVLDYTFL-KLGIDRMEHPICMTEPLANPTYVRSTMTELLFELYNA 144
Query: 263 PAMYVAIQAVLSLYASGR--TTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTD 436
P++ I + S Y + + ++GIVL+ G+ SH +P+ G + R+ G +
Sbjct: 145 PSVAYGIDGLFSFYHNTKPSSSGIVLNLGNAASHVIPVLNGERILSEAKRISWGGSQSSS 204
Query: 437 YLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEK 589
YL+K+ + SF + C+V+ D+ ++A A LE+
Sbjct: 205 YLLKLFQIKYPSFPIKMLPSQAELLMHDHCHVSSDYTHDIAHALDRDILER 255
>SPBP23A10.08 |alp5|arp4|actin-like protein Arp4|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 433
Score = 89.0 bits (211), Expect = 5e-19
Identities = 44/134 (32%), Positives = 69/134 (51%)
Frame = +2
Query: 68 LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF 247
+ +K I +G V NWD +W + +L+ P EHP+L+TE NP NR K + MF
Sbjct: 63 MEIKNAIRNGWVENWDVTVDLWRYGLEQQLKTNPLEHPILITEPFDNPPENRVKTLETMF 122
Query: 248 ETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRD 427
E+ PA Y+A Q + +ASG+ T ++D G S IY+G+ L +G
Sbjct: 123 ESLRCPATYLAKQETCAAFASGKGTACLVDIGAERSSVSAIYDGFVLQKGYQVQHFSGNA 182
Query: 428 LTDYLMKILTERGY 469
+ D L + L ++ +
Sbjct: 183 INDILAQTLRDKNF 196
>SPAC23D3.09 |arp42|arp4|SWI/SNF and RSC complex subunit
Arp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 430
Score = 79.0 bits (186), Expect = 5e-16
Identities = 40/152 (26%), Positives = 76/152 (50%), Gaps = 2/152 (1%)
Frame = +2
Query: 26 DSYVCDEAQSKRGI--LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEA 199
+ YV DE Q I + +K +GI+ +W+ W +L+V P E+ +++TE
Sbjct: 50 NKYVVDELQIHAPIPGMEVKNGKSNGIIQDWESTLYTWERGLKEKLQVNPTEYAMMITEP 109
Query: 200 PLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEG 379
NP++ R+++ + FE + PA Y+ QAV +A+ ++T +++D G + P+ +G
Sbjct: 110 SWNPQSVRQQIMEAAFEQLHVPAFYLTKQAVCVAFANSKSTALIVDIGSDNASVTPVVDG 169
Query: 380 YALPHAILRLDLAGRDLTDYLMKILTERGYSF 475
+ I + LAG L + ++ F
Sbjct: 170 LIIRKGIFKQSLAGDFLNANIEQLFNTMNIEF 201
>SPCC550.12 |arp6||actin-like protein Arp6|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 401
Score = 71.3 bits (167), Expect = 1e-13
Identities = 52/191 (27%), Positives = 87/191 (45%), Gaps = 18/191 (9%)
Frame = +2
Query: 89 EHGIVTNWDDMEKIWHHTFYNELRVAPE--EHPVLLTEAPLNPKANREKMTQIMFETFNT 262
E G + +W +W N + P ++ +LLT+ + Q++FE F
Sbjct: 64 EKGYLVHWSTETAVWDLVMRNVGVMEPSMADYSLLLTQPVFTMPSIEHNTIQLVFEEFQF 123
Query: 263 PAMYVAIQAVLSLYASGRTTG--------------IVLDSGDGVSHTVPIYEGYALPHAI 400
A A L + G T +V+DSG +H +P+ + A+
Sbjct: 124 DAYLPCTPAELIPWDHGSFTMNQEDAYTGQHGECVLVIDSGYSFTHIIPVIDFSVQEQAV 183
Query: 401 LRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASS-- 574
R+D+ G+ LT+YL ++++ R Y+ E IV +IKE +CYV+ +F+++M
Sbjct: 184 KRVDVGGKLLTNYLKEVISYRKYNM--MEETYIVNEIKESVCYVSQNFKEDMEICHEKPR 241
Query: 575 SSLEKSYELPD 607
S LE Y LPD
Sbjct: 242 SKLEICYALPD 252
>SPAC1071.06 |arp9||SWI/SNF and RSC complex subunit
Arp9|Schizosaccharomyces pombe|chr 1|||Manual
Length = 523
Score = 68.9 bits (161), Expect = 5e-13
Identities = 44/149 (29%), Positives = 70/149 (46%), Gaps = 4/149 (2%)
Frame = +2
Query: 83 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEE----HPVLLTEAPLNPKANREKMTQIMFE 250
PI+ G V +W+ ++ W H Y+ L P + +PV L +RE TQ FE
Sbjct: 113 PIQRGRVVDWEALKAFWKH-LYSLLLKDPNDTTFRYPVCLVIPTYWSLYDRELATQFFFE 171
Query: 251 TFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDL 430
P +A + ++ LYA G G+V+D G + PI +G + A +L L GR +
Sbjct: 172 ECQVPGFTIAYEPLMGLYAIGILHGLVIDIGYEKTDITPILDGQIIFTATQQLPLGGRYM 231
Query: 431 TDYLMKILTERGYSFTTTAEREIVRDIKE 517
T +L +L E + ++ + DI E
Sbjct: 232 TQHLQNLLRESLPTLKSSGQYVSKEDITE 260
>SPAC664.02c |||actin-like protein Arp8 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 620
Score = 37.5 bits (83), Expect = 0.002
Identities = 28/146 (19%), Positives = 67/146 (45%), Gaps = 12/146 (8%)
Frame = +2
Query: 74 LKYPIEHGIVTNWD---------DMEKIWHHTFYNELRVAPEE---HPVLLTEAPLNPKA 217
L YPI+ G+ D D+ +I+ ++ + L++ + + V+ L +
Sbjct: 198 LFYPIKSGVFNESDYASSQQLLADIYEIFKYSITSLLQIPVSQLSQYSVIFIVPDLYDRV 257
Query: 218 NREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHA 397
EK+ I+F + + +++ + + +G + V+D G + + EG +P++
Sbjct: 258 YVEKILDILFFDLHFGKAAIVQESLCTSFGAGMSAACVVDMGAQKTSISCVEEGVVVPNS 317
Query: 398 ILRLDLAGRDLTDYLMKILTERGYSF 475
++++ G D+T MK+L + +
Sbjct: 318 RIKINYGGDDITLLFMKLLMRSHFPY 343
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 34.7 bits (76), Expect = 0.011
Identities = 27/86 (31%), Positives = 35/86 (40%), Gaps = 3/86 (3%)
Frame = +3
Query: 252 PSTHPPCT*LSRPCSHC-TRPV--VPPVSCWIPAMVYPTQYPSTRVTPYRTPSCVWT*PV 422
P HPP LS+P S P+ VPPV + + P PS P PS P+
Sbjct: 987 PKDHPPSAPLSKPVSTSPAAPLARVPPVP-KLSSKAPPVPLPSADAPPIPVPSTAPPVPI 1045
Query: 423 ATSQTT**RFSQNVVTRSPPPPSVKS 500
TS + S + PP P+ S
Sbjct: 1046 PTSTPPVPKSSSGAPSAPPPVPAPSS 1071
>SPAC26A3.05 |chc1||clathrin heavy chain Chc1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1666
Score = 31.9 bits (69), Expect = 0.076
Identities = 19/53 (35%), Positives = 31/53 (58%), Gaps = 5/53 (9%)
Frame = +2
Query: 143 FYNELRVAPEEHPVLLTE--APLNPKANREKMTQIMFETFNTPAM---YVAIQ 286
+Y L E+HP+LLT+ A L P+ + ++ +I ++ NTP + VAIQ
Sbjct: 1399 YYRALNFYLEQHPMLLTDLLAALTPRIDHPRVIRIFEKSENTPLILNFMVAIQ 1451
>SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 800
Score = 28.3 bits (60), Expect = 0.94
Identities = 36/147 (24%), Positives = 53/147 (36%)
Frame = +3
Query: 165 LPRSTQSCSPKLPSTPKPTERR*HRLCSRPSTHPPCT*LSRPCSHCTRPVVPPVSCWIPA 344
+P + S +P P+ P PT S ST PP S + + + SC
Sbjct: 345 IPPTGNSTTPVTPTVP-PTST------SSTSTPPPPASTSSTGTSSSPLLSTSTSCTTST 397
Query: 345 MVYPTQYPSTRVTPYRTPSCVWT*PVATSQTT**RFSQNVVTRSPPPPSVKSFATSRRNS 524
+ PT +T VTP P+ T P+ T+ T S +V S P S T+ S
Sbjct: 398 SIPPTGNSTTPVTPTVPPTSSST-PLTTTNCT---TSTSVPYTSTPVTSTPLATTNCTTS 453
Query: 525 ATLRSTXXXXXXXXXXXXXXXXXTNSP 605
++ T T+ P
Sbjct: 454 TSVPYTSTPVTSTPLTTTNCTTSTSIP 480
>SPAC3F10.03 |||glycine tRNA-ligase|Schizosaccharomyces pombe|chr
1|||Manual
Length = 652
Score = 25.0 bits (52), Expect(2) = 1.1
Identities = 9/21 (42%), Positives = 12/21 (57%)
Frame = +1
Query: 358 HSTHLRGLRPTARHPAFGLSR 420
H+ H+R P P+FGL R
Sbjct: 486 HTEHIRTYTPNVIEPSFGLGR 506
Score = 21.4 bits (43), Expect(2) = 1.1
Identities = 7/19 (36%), Positives = 11/19 (57%)
Frame = +1
Query: 226 EDDTDYVRDLQHTRHVRSY 282
E D + +HT H+R+Y
Sbjct: 475 ESDLVTIEKRKHTEHIRTY 493
>SPBC115.01c |rrp46||exosome subunit Rrp46 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 226
Score = 26.2 bits (55), Expect = 3.8
Identities = 10/25 (40%), Positives = 18/25 (72%)
Frame = +2
Query: 185 LLTEAPLNPKANREKMTQIMFETFN 259
+L APL+ + +KM +++FET+N
Sbjct: 181 VLETAPLHAEEVSKKMKELLFETYN 205
>SPCC320.04c |||GTPase Gem1 |Schizosaccharomyces pombe|chr
3|||Manual
Length = 630
Score = 26.2 bits (55), Expect = 3.8
Identities = 13/42 (30%), Positives = 26/42 (61%), Gaps = 1/42 (2%)
Frame = -1
Query: 345 SPESST-IPVVRPDAYSESTAWIATYMAGVLKVSNIICVIFS 223
+P+S+ + +V D S+S Y+A +K +N+IC+++S
Sbjct: 44 NPDSNDDVSLVLVDTQSDSNE--REYLAAEIKKANVICLVYS 83
>SPCC18B5.03 |wee1||dual specificity protein kinase
Wee1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 877
Score = 26.2 bits (55), Expect = 3.8
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = +3
Query: 138 TPSTMSCV*LPRSTQSCSPKLPSTPKPTE 224
TPS S P S+ + SP PSTP T+
Sbjct: 405 TPSKPSTFVRPHSSSTDSPPSPSTPSNTQ 433
>SPAC1834.05 |alg9||mannosyltransferase complex subunit Alg9
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 577
Score = 25.8 bits (54), Expect = 5.0
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = +3
Query: 309 PVVPPVSCWIPAMVYPTQYPSTRVTPY 389
P+ WIP MVYP + T+ TP+
Sbjct: 513 PIYSKSDGWIPVMVYP--FIDTKQTPF 537
>SPAC1F3.02c |mkh1||MEK kinase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1116
Score = 25.8 bits (54), Expect = 5.0
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +3
Query: 462 VVTRSPPPPSVKSFATSRRNSATLR 536
V R PPPP ++ + R+N+ T R
Sbjct: 538 VAHRDPPPPPTETSSLRRKNTLTRR 562
>SPCC24B10.21 |tpi1|tpi|triosephosphate
isomerase|Schizosaccharomyces pombe|chr 3|||Manual
Length = 249
Score = 25.8 bits (54), Expect = 5.0
Identities = 21/64 (32%), Positives = 34/64 (53%)
Frame = -3
Query: 532 NVAEFLLDVANDFTLGGGGERVTTFCENLHQVVCEVATG*VQTQDGVR*GVTLVDGYCVG 353
N A+ L+D +TL G ER T F E+ + V + +T+ + G+T+V C+G
Sbjct: 78 NSAQSLIDAGITYTLTGHSERRTIFKES-DEFVAD------KTKFALEQGLTVV--ACIG 128
Query: 352 YTIA 341
T+A
Sbjct: 129 ETLA 132
>SPAC26F1.04c |etr1||enoyl-[acyl-carrier protein]
reductase|Schizosaccharomyces pombe|chr 1|||Manual
Length = 372
Score = 25.4 bits (53), Expect = 6.6
Identities = 22/74 (29%), Positives = 33/74 (44%), Gaps = 5/74 (6%)
Frame = -3
Query: 238 LCHLLSVGFGVEGSFGEQDWVLLGSYTQLIVEGVMP-DLLHIVPVGDDAVFDGVFECEDT 62
L ++ VG +G+F W +LGS M D +VPV D + F + E
Sbjct: 96 LVEVVDVGDQFKGTFSPGQWAILGSVNLGSWRTEMNIDGRSLVPV-DKSAFPSIAEAATL 154
Query: 61 SL----ALCLITYV 32
S+ A CL+ +V
Sbjct: 155 SVNPCTAYCLLQHV 168
>SPAC2E1P3.04 |||copper amine oxidase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 712
Score = 25.0 bits (52), Expect = 8.8
Identities = 11/37 (29%), Positives = 18/37 (48%)
Frame = +1
Query: 64 YPHTQIPHRTRHRHQLGRYGEDLASHLLQ*AACSSRG 174
Y + + PH+ +H LG YG ++ L C +G
Sbjct: 307 YGNPEHPHQRKHAFDLGEYGAGYLTNPLA-LGCDCKG 342
>SPAC16C9.03 |||export adaptor|Schizosaccharomyces pombe|chr
1|||Manual
Length = 498
Score = 25.0 bits (52), Expect = 8.8
Identities = 9/20 (45%), Positives = 10/20 (50%)
Frame = -2
Query: 179 GAPRELHAAHCRRCDARSSP 120
G PRE HCR C+ P
Sbjct: 52 GIPRESTVNHCRECERYMQP 71
>SPAC167.01 |ppk4||serine/threonine protein kinase Ppk4
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1072
Score = 25.0 bits (52), Expect = 8.8
Identities = 15/52 (28%), Positives = 24/52 (46%)
Frame = -1
Query: 366 GTVWDTPSPESSTIPVVRPDAYSESTAWIATYMAGVLKVSNIICVIFSLLAL 211
G+ PS IP++ P+ S + I ++ L VS I FS+L +
Sbjct: 493 GSTKTLPSIGKKPIPLLDPNPISSTPISITFWVIMFLSVSFTIVTFFSILRI 544
>SPAC9G1.10c |||inositol polyphosphate phosphatase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1191
Score = 25.0 bits (52), Expect = 8.8
Identities = 9/13 (69%), Positives = 11/13 (84%)
Frame = +3
Query: 477 PPPPSVKSFATSR 515
PPPP VKS AT++
Sbjct: 392 PPPPRVKSLATNK 404
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,670,106
Number of Sequences: 5004
Number of extensions: 58343
Number of successful extensions: 184
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 171
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 177
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 271646730
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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