Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0013_H23
         (433 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC068524-1|AAH68524.1|   76|Homo sapiens zinc finger protein 706...    50   4e-06
BC015925-1|AAH15925.1|   76|Homo sapiens zinc finger protein 706...    50   4e-06
AF275809-1|AAG23820.1|   76|Homo sapiens PNAS-113 protein.             50   4e-06
AF275802-1|AAG23816.1|   76|Homo sapiens PNAS-106 protein.             50   4e-06
BC101776-1|AAI01777.1|  761|Homo sapiens TatD DNase domain conta...    29   6.8  
BC101770-1|AAI01771.1|  761|Homo sapiens TatD DNase domain conta...    29   6.8  
BC090935-1|AAH90935.1|  761|Homo sapiens TatD DNase domain conta...    29   6.8  

>BC068524-1|AAH68524.1|   76|Homo sapiens zinc finger protein 706
           protein.
          Length = 76

 Score = 49.6 bits (113), Expect = 4e-06
 Identities = 19/25 (76%), Positives = 22/25 (88%)
 Frame = +2

Query: 281 QMPDPKTYKQHFENKHPKNDLPEDL 355
           QMPDPKT+KQHFE+KHPK  LP +L
Sbjct: 47  QMPDPKTFKQHFESKHPKTPLPPEL 71


>BC015925-1|AAH15925.1|   76|Homo sapiens zinc finger protein 706
           protein.
          Length = 76

 Score = 49.6 bits (113), Expect = 4e-06
 Identities = 19/25 (76%), Positives = 22/25 (88%)
 Frame = +2

Query: 281 QMPDPKTYKQHFENKHPKNDLPEDL 355
           QMPDPKT+KQHFE+KHPK  LP +L
Sbjct: 47  QMPDPKTFKQHFESKHPKTPLPPEL 71


>AF275809-1|AAG23820.1|   76|Homo sapiens PNAS-113 protein.
          Length = 76

 Score = 49.6 bits (113), Expect = 4e-06
 Identities = 19/25 (76%), Positives = 22/25 (88%)
 Frame = +2

Query: 281 QMPDPKTYKQHFENKHPKNDLPEDL 355
           QMPDPKT+KQHFE+KHPK  LP +L
Sbjct: 47  QMPDPKTFKQHFESKHPKTPLPPEL 71


>AF275802-1|AAG23816.1|   76|Homo sapiens PNAS-106 protein.
          Length = 76

 Score = 49.6 bits (113), Expect = 4e-06
 Identities = 19/25 (76%), Positives = 22/25 (88%)
 Frame = +2

Query: 281 QMPDPKTYKQHFENKHPKNDLPEDL 355
           QMPDPKT+KQHFE+KHPK  LP +L
Sbjct: 47  QMPDPKTFKQHFESKHPKTPLPPEL 71


>BC101776-1|AAI01777.1|  761|Homo sapiens TatD DNase domain
           containing 2 protein.
          Length = 761

 Score = 29.1 bits (62), Expect = 6.8
 Identities = 20/59 (33%), Positives = 28/59 (47%)
 Frame = -1

Query: 286 HLSIANYTHMDIMLFVQPSSGQ*HCDPVVSSS*TFSQQPLPVTEFSGAPEPSCVTKLYV 110
           HL I  +   ++++   PSSG    D    S+  FSQ+     + S  PEPS  T  YV
Sbjct: 311 HLEIQKHKDREVVM-EHPSSGSDWSDVEEISTVRFSQEEPVSLKPSAVPEPSSFTTDYV 368


>BC101770-1|AAI01771.1|  761|Homo sapiens TatD DNase domain
           containing 2 protein.
          Length = 761

 Score = 29.1 bits (62), Expect = 6.8
 Identities = 20/59 (33%), Positives = 28/59 (47%)
 Frame = -1

Query: 286 HLSIANYTHMDIMLFVQPSSGQ*HCDPVVSSS*TFSQQPLPVTEFSGAPEPSCVTKLYV 110
           HL I  +   ++++   PSSG    D    S+  FSQ+     + S  PEPS  T  YV
Sbjct: 311 HLEIQKHKDREVVM-EHPSSGSDWSDVEEISTVRFSQEEPVSLKPSAVPEPSSFTTDYV 368


>BC090935-1|AAH90935.1|  761|Homo sapiens TatD DNase domain
           containing 2 protein.
          Length = 761

 Score = 29.1 bits (62), Expect = 6.8
 Identities = 20/59 (33%), Positives = 28/59 (47%)
 Frame = -1

Query: 286 HLSIANYTHMDIMLFVQPSSGQ*HCDPVVSSS*TFSQQPLPVTEFSGAPEPSCVTKLYV 110
           HL I  +   ++++   PSSG    D    S+  FSQ+     + S  PEPS  T  YV
Sbjct: 311 HLEIQKHKDREVVM-EHPSSGSDWSDVEEISTVRFSQEEPVSLKPSAVPEPSSFTTDYV 368


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 50,765,906
Number of Sequences: 237096
Number of extensions: 915415
Number of successful extensions: 1734
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1698
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1734
length of database: 76,859,062
effective HSP length: 83
effective length of database: 57,180,094
effective search space used: 3430805640
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)