Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0013_H22
         (464 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ091184-1|AAZ42364.1|  157|Apis mellifera lipophorin receptor p...    23   1.2  
DQ091183-1|AAZ42363.1|  128|Apis mellifera lipophorin receptor p...    23   1.2  
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr...    22   3.7  
AF069739-1|AAC63272.2|  690|Apis mellifera translation initiatio...    21   6.5  

>DQ091184-1|AAZ42364.1|  157|Apis mellifera lipophorin receptor
           protein.
          Length = 157

 Score = 23.4 bits (48), Expect = 1.2
 Identities = 9/18 (50%), Positives = 9/18 (50%)
 Frame = +2

Query: 311 YIPVIQPSANNDCSCVNG 364
           Y P  QP   N C  VNG
Sbjct: 24  YHPYRQPDGMNQCQAVNG 41


>DQ091183-1|AAZ42363.1|  128|Apis mellifera lipophorin receptor
           protein.
          Length = 128

 Score = 23.4 bits (48), Expect = 1.2
 Identities = 9/18 (50%), Positives = 9/18 (50%)
 Frame = +2

Query: 311 YIPVIQPSANNDCSCVNG 364
           Y P  QP   N C  VNG
Sbjct: 24  YHPYRQPDGMNQCQAVNG 41


>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
           protein.
          Length = 1308

 Score = 21.8 bits (44), Expect = 3.7
 Identities = 8/24 (33%), Positives = 13/24 (54%)
 Frame = -2

Query: 415 DANRHHSTVIPDHRCKRSVNARTV 344
           D NRH ST+  DH+    + +  +
Sbjct: 238 DENRHSSTLDIDHKMLTPIKSEPI 261


>AF069739-1|AAC63272.2|  690|Apis mellifera translation initiation
           factor 2 protein.
          Length = 690

 Score = 21.0 bits (42), Expect = 6.5
 Identities = 7/11 (63%), Positives = 8/11 (72%)
 Frame = +3

Query: 255 GCECYKTVLLK 287
           GC C K +LLK
Sbjct: 608 GCRCVKGILLK 618


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 122,791
Number of Sequences: 438
Number of extensions: 2418
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 12436029
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)