Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0013_H21
         (516 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    29   0.028
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             21   7.5  
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    21   10.0 
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    21   10.0 
AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein ...    21   10.0 

>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 29.1 bits (62), Expect = 0.028
 Identities = 11/30 (36%), Positives = 18/30 (60%)
 Frame = -2

Query: 347 FLFCISTDSFYLFCFVVLFMSLNVIKILGN 258
           F+   S  SFY+ C +++F+  N+ K L N
Sbjct: 343 FIIYSSLSSFYIPCIIMVFLYYNIFKALRN 372


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 21.0 bits (42), Expect = 7.5
 Identities = 7/23 (30%), Positives = 14/23 (60%)
 Frame = -3

Query: 79  KQSPAYLGKATPTSGFIWSLINV 11
           + SPA+ G ++PT+  +   + V
Sbjct: 923 RASPAFSGTSSPTNSLVGKTVAV 945


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 20.6 bits (41), Expect = 10.0
 Identities = 8/25 (32%), Positives = 12/25 (48%)
 Frame = +1

Query: 292 NKTTKQKR*KESVDIQKRKYLELQW 366
           N +T  K   +S+D  +   L L W
Sbjct: 215 NDSTSSKTDDDSIDFDRMNSLGLSW 239


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 20.6 bits (41), Expect = 10.0
 Identities = 8/25 (32%), Positives = 12/25 (48%)
 Frame = +1

Query: 292 NKTTKQKR*KESVDIQKRKYLELQW 366
           N +T  K   +S+D  +   L L W
Sbjct: 253 NDSTSSKTDDDSIDFDRMNSLGLSW 277


>AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein
           protein.
          Length = 352

 Score = 20.6 bits (41), Expect = 10.0
 Identities = 6/12 (50%), Positives = 8/12 (66%)
 Frame = +2

Query: 2   HEGHINQGPDEP 37
           H+G +  GPD P
Sbjct: 150 HQGSVLDGPDSP 161


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 139,103
Number of Sequences: 438
Number of extensions: 3053
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14354847
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)